BLASTX nr result

ID: Glycyrrhiza24_contig00003394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003394
         (1810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance...   726   0.0  
ref|XP_003538161.1| PREDICTED: bifunctional polymyxin resistance...   724   0.0  
gb|ACJ84436.1| unknown [Medicago truncatula]                          718   0.0  
gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium h...   717   0.0  
ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabid...   711   0.0  

>ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
            [Glycine max]
          Length = 387

 Score =  726 bits (1873), Expect = 0.0
 Identities = 351/371 (94%), Positives = 358/371 (96%)
 Frame = -2

Query: 1650 AGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHKVLALDVYSDKIKHLLEPDTN 1471
            + RVDLDGNPIKPITICMIGAGGFIGSHLCEKLM+ETPH VLALDVY+DKIKHLLEP T 
Sbjct: 3    SSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHSVLALDVYNDKIKHLLEPHTL 62

Query: 1470 PWAGRIHFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 1291
            PWA RI FHRLNIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 63   PWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 122

Query: 1290 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSSLRQDPAYYVLKEDESPCIFGPIEKQRWS 1111
            KYCSENNKRLIHFSTCEVYGKTIGSFLPKDS LRQDPAYYVLKEDESPCIFG IEKQRWS
Sbjct: 123  KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWS 182

Query: 1110 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 931
            YACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 183  YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 242

Query: 930  LRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEM 751
            LRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEM
Sbjct: 243  LRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEM 302

Query: 750  MIQVYSKISGEQSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 571
            M QVYSK+SGE   E PTIDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLL
Sbjct: 303  MTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 362

Query: 570  ESTLTYQHRTY 538
            ESTLTYQHRTY
Sbjct: 363  ESTLTYQHRTY 373


>ref|XP_003538161.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
            [Glycine max]
          Length = 387

 Score =  724 bits (1869), Expect = 0.0
 Identities = 351/371 (94%), Positives = 362/371 (97%), Gaps = 2/371 (0%)
 Frame = -2

Query: 1644 RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHKVLALDVYSDKIKHLLEPDTNP- 1468
            RVDLDGNPIKP+TICMIGAGGFIGSHLCEKLM+ETPH VLALDVYSDKIKHLL+P  +P 
Sbjct: 3    RVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYSDKIKHLLDPADSPL 62

Query: 1467 -WAGRIHFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 1291
             WAGRI FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 63   PWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 122

Query: 1290 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSSLRQDPAYYVLKEDESPCIFGPIEKQRWS 1111
            KYCSENNKRLIHFSTCEVYGKTIG+FLPKDS LR+DPAYYVLKEDESPCIFG IEKQRWS
Sbjct: 123  KYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWS 182

Query: 1110 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 931
            YACAKQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 183  YACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 242

Query: 930  LRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEM 751
            LRGEPLKLVDGGQSQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE+
Sbjct: 243  LRGEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEI 302

Query: 750  MIQVYSKISGEQSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 571
            MIQVYSK+SGEQ+ ETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL
Sbjct: 303  MIQVYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 362

Query: 570  ESTLTYQHRTY 538
            ESTLTYQHRTY
Sbjct: 363  ESTLTYQHRTY 373


>gb|ACJ84436.1| unknown [Medicago truncatula]
          Length = 390

 Score =  718 bits (1853), Expect = 0.0
 Identities = 345/369 (93%), Positives = 358/369 (97%)
 Frame = -2

Query: 1644 RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHKVLALDVYSDKIKHLLEPDTNPW 1465
            R+DLDGNPIKP+TICMIGAGGFIGSHLCEKLM+ET HKVLALDVY+DKIKHLLEP++ PW
Sbjct: 8    RIDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYNDKIKHLLEPESLPW 67

Query: 1464 AGRIHFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 1285
             GRIHFHRLNIK+DSRLEGLIKMADL INLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 68   NGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 127

Query: 1284 CSENNKRLIHFSTCEVYGKTIGSFLPKDSSLRQDPAYYVLKEDESPCIFGPIEKQRWSYA 1105
            CSE NKRLIHFSTCEVYGKTIGS+LPKDS LRQDPAYY+LKED SPCIFG IEKQRWSYA
Sbjct: 128  CSETNKRLIHFSTCEVYGKTIGSYLPKDSPLRQDPAYYMLKEDVSPCIFGSIEKQRWSYA 187

Query: 1104 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 925
            CAKQLIERL+YAEGAE+GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR
Sbjct: 188  CAKQLIERLVYAEGAESGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 247

Query: 924  GEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMI 745
            GEPLKLVDGG+SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMI
Sbjct: 248  GEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMI 307

Query: 744  QVYSKISGEQSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLES 565
            QVYSK+SG Q PETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQL WNPKTSLWDLLES
Sbjct: 308  QVYSKVSGTQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLEWNPKTSLWDLLES 367

Query: 564  TLTYQHRTY 538
            TLTYQHRTY
Sbjct: 368  TLTYQHRTY 376


>gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium hirsutum]
          Length = 386

 Score =  717 bits (1851), Expect = 0.0
 Identities = 346/372 (93%), Positives = 357/372 (95%)
 Frame = -2

Query: 1653 MAGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHKVLALDVYSDKIKHLLEPDT 1474
            MA R DLDG PIKP+TICMIGAGGFIGSHLCEKLM+ETPHKVLALDVY+DKIKHLLEPD+
Sbjct: 1    MATRTDLDGRPIKPLTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDS 60

Query: 1473 NPWAGRIHFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 1294
             PWAGRI FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 61   LPWAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 120

Query: 1293 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSSLRQDPAYYVLKEDESPCIFGPIEKQRW 1114
            VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDS LRQDPAYYVLKED SPCIFG IEKQRW
Sbjct: 121  VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDTSPCIFGSIEKQRW 180

Query: 1113 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 934
            SYACAKQLIERLIYAEGAE GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
Sbjct: 181  SYACAKQLIERLIYAEGAETGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 240

Query: 933  LLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 754
            LLR EPLKLVDGG+SQRTF+YIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTVRQLAE
Sbjct: 241  LLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPDRANGHIFNVGNPNNEVTVRQLAE 300

Query: 753  MMIQVYSKISGEQSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL 574
            MM +VY+K+SGE   E+PT+DVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL
Sbjct: 301  MMTKVYAKVSGETVLESPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL 360

Query: 573  LESTLTYQHRTY 538
            LESTLTYQHRTY
Sbjct: 361  LESTLTYQHRTY 372


>ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp.
            lyrata] gi|297338288|gb|EFH68705.1|
            UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 389

 Score =  711 bits (1836), Expect = 0.0
 Identities = 342/371 (92%), Positives = 355/371 (95%)
 Frame = -2

Query: 1650 AGRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHKVLALDVYSDKIKHLLEPDTN 1471
            AGR+DLDG PIKPITICMIGAGGFIGSHLCEKLM ETPHKVLALDVY+DKIKHLLEPDT 
Sbjct: 5    AGRLDLDGKPIKPITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV 64

Query: 1470 PWAGRIHFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 1291
             WAGRI FHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 65   QWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124

Query: 1290 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSSLRQDPAYYVLKEDESPCIFGPIEKQRWS 1111
            KYCSENNKRLIHFSTCEVYGKTIGSFLPKD  LRQDP +YVLKED SPCIFG IEKQRWS
Sbjct: 125  KYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWS 184

Query: 1110 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 931
            YACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 185  YACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244

Query: 930  LRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEM 751
            LR EPLKLVDGG+SQRTF+YIKDAIEAVLLMIENP RANGHIFNVGNPNNEVTVRQLAEM
Sbjct: 245  LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEM 304

Query: 750  MIQVYSKISGEQSPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 571
            M +VY+K+SGE + E+PTIDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLL
Sbjct: 305  MTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLL 364

Query: 570  ESTLTYQHRTY 538
            ESTLTYQH TY
Sbjct: 365  ESTLTYQHTTY 375


Top