BLASTX nr result

ID: Glycyrrhiza24_contig00003340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003340
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540098.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...   491   e-136
ref|XP_003526068.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...   489   e-136
ref|XP_002316900.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_002284913.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...   469   e-129
ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidy...   465   e-128

>ref|XP_003540098.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
            [Glycine max]
          Length = 306

 Score =  491 bits (1264), Expect = e-136
 Identities = 246/282 (87%), Positives = 253/282 (89%)
 Frame = -2

Query: 1060 NNAKGWXXXXXXXXXXXXXXXXXXAYLTRFNKLRNRVVGIIPARFASSRFPGKPLVQILG 881
            + AK W                  AY+TRF+K R+RVVGIIPARFASSRF GKPLVQILG
Sbjct: 25   STAKAWIIHGIVAGVAIAAAVGARAYMTRFSKFRSRVVGIIPARFASSRFQGKPLVQILG 84

Query: 880  KPMIQRTWERAKLATTLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK 701
            KPMIQRTWERAKLA TLDH+VVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK
Sbjct: 85   KPMIQRTWERAKLAATLDHIVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK 144

Query: 700  LGKKYDIVVNIQGDEPLVEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDSNRVKCVV 521
            LGKKYDIVVNIQGDEPL+EPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHD NRVKCVV
Sbjct: 145  LGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVV 204

Query: 520  DNHGYAIYFSRGLIPFNKSGKVNQHFPYLLHLGIQSYDAKFLKIYPDLQPTPLQLEEDLE 341
            DN GYAIYFSRGLIPFNKSG VNQ FPYLLHLGIQSYDAKFL IYPDLQPTPLQLEEDLE
Sbjct: 205  DNRGYAIYFSRGLIPFNKSGMVNQQFPYLLHLGIQSYDAKFLNIYPDLQPTPLQLEEDLE 264

Query: 340  QLKVLENGYKMKVIKVDHEAHGVDSPEDVEKIESLMRERNLS 215
            QLKVLENGYKMKVIKVDHEAHGVD+PEDV KIESLMRERNLS
Sbjct: 265  QLKVLENGYKMKVIKVDHEAHGVDTPEDVGKIESLMRERNLS 306


>ref|XP_003526068.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
            [Glycine max]
          Length = 305

 Score =  489 bits (1260), Expect = e-136
 Identities = 246/282 (87%), Positives = 253/282 (89%)
 Frame = -2

Query: 1060 NNAKGWXXXXXXXXXXXXXXXXXXAYLTRFNKLRNRVVGIIPARFASSRFPGKPLVQILG 881
            N AK W                  AY+TRF+K R+RVVGIIPARFASSRF GKPLVQILG
Sbjct: 24   NTAKAWIIHGIVAGVAIAAAVGARAYMTRFSKFRSRVVGIIPARFASSRFEGKPLVQILG 83

Query: 880  KPMIQRTWERAKLATTLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK 701
            KPMIQRTWERAKLA TLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK
Sbjct: 84   KPMIQRTWERAKLAATLDHVVVATDDEKIADCCRQFGADVIMTSESCRNGTERCNEALQK 143

Query: 700  LGKKYDIVVNIQGDEPLVEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDSNRVKCVV 521
            LGKKYDIVVNIQGDEPL+EPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHD NRVKCVV
Sbjct: 144  LGKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVV 203

Query: 520  DNHGYAIYFSRGLIPFNKSGKVNQHFPYLLHLGIQSYDAKFLKIYPDLQPTPLQLEEDLE 341
            DN GYAIYFSRGLIPFNKSGKVNQ FPYLLHLGIQSYDAKFL IYP+L+PTPLQLEEDLE
Sbjct: 204  DNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDAKFLNIYPNLRPTPLQLEEDLE 263

Query: 340  QLKVLENGYKMKVIKVDHEAHGVDSPEDVEKIESLMRERNLS 215
            QLKVLENGYKMKVIKV HEAHGVD+PEDV KIESLMRERNLS
Sbjct: 264  QLKVLENGYKMKVIKVHHEAHGVDTPEDVGKIESLMRERNLS 305


>ref|XP_002316900.1| predicted protein [Populus trichocarpa] gi|222859965|gb|EEE97512.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  470 bits (1210), Expect = e-130
 Identities = 229/257 (89%), Positives = 244/257 (94%)
 Frame = -2

Query: 985 YLTRFNKLRNRVVGIIPARFASSRFPGKPLVQILGKPMIQRTWERAKLATTLDHVVVATD 806
           YL R+ K R++VVGIIPAR+ASSRF GKPLV ILGKPMIQRTWERAKLATTLDH+VVATD
Sbjct: 37  YLVRYRKFRSQVVGIIPARYASSRFEGKPLVNILGKPMIQRTWERAKLATTLDHIVVATD 96

Query: 805 DEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLVEPEIIDG 626
           DEKIA+CCR FGADV+MTSESCRNGTERCNEALQKL KKYD+VVNIQGDEPL+EPEIIDG
Sbjct: 97  DEKIAECCRGFGADVVMTSESCRNGTERCNEALQKLDKKYDVVVNIQGDEPLIEPEIIDG 156

Query: 625 VVKALQAAPDAVFSTAVTSLKPEDAHDSNRVKCVVDNHGYAIYFSRGLIPFNKSGKVNQH 446
           +VK+LQAAPDAVFSTAVTSLKPEDA D NRVKCVVDN GYAIYFSRGLIP+NKSGKVN  
Sbjct: 157 IVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKVNPQ 216

Query: 445 FPYLLHLGIQSYDAKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDS 266
           FPYLLHLGIQSYDAKFLKIYP+LQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD 
Sbjct: 217 FPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDI 276

Query: 265 PEDVEKIESLMRERNLS 215
           PEDVEKIE+LMRE+NLS
Sbjct: 277 PEDVEKIETLMREQNLS 293


>ref|XP_002284913.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase [Vitis
           vinifera] gi|302143017|emb|CBI20312.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score =  469 bits (1206), Expect = e-129
 Identities = 232/256 (90%), Positives = 241/256 (94%)
 Frame = -2

Query: 982 LTRFNKLRNRVVGIIPARFASSRFPGKPLVQILGKPMIQRTWERAKLATTLDHVVVATDD 803
           L R  K R+RVVGIIPARFASSRF GKPLVQILGKPMIQRTWERAKLATTLDHVVVATDD
Sbjct: 42  LRRSGKFRSRVVGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHVVVATDD 101

Query: 802 EKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLVEPEIIDGV 623
           +KIADCCR FGADVIMTSESCRNGTERCNEALQKL K+YDIVVNIQGDEPL+EPEIIDGV
Sbjct: 102 DKIADCCRGFGADVIMTSESCRNGTERCNEALQKLEKQYDIVVNIQGDEPLIEPEIIDGV 161

Query: 622 VKALQAAPDAVFSTAVTSLKPEDAHDSNRVKCVVDNHGYAIYFSRGLIPFNKSGKVNQHF 443
           VKALQAAPDAVFSTAVTSLKPED  D NRVKC+VDN GYAIYFSRGLIPFNKSG+VNQ F
Sbjct: 162 VKALQAAPDAVFSTAVTSLKPEDGFDPNRVKCIVDNRGYAIYFSRGLIPFNKSGEVNQQF 221

Query: 442 PYLLHLGIQSYDAKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDSP 263
           PYLLHLGIQSYD KFL+IYPDL PTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD+P
Sbjct: 222 PYLLHLGIQSYDTKFLRIYPDLPPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTP 281

Query: 262 EDVEKIESLMRERNLS 215
           EDV+KIES MRERNLS
Sbjct: 282 EDVDKIESFMRERNLS 297


>ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
           [Ricinus communis] gi|223543544|gb|EEF45074.1|
           cmp-2-keto-3-deoctulosonate (cmp-kdo)
           cytidyltransferase, putative [Ricinus communis]
          Length = 294

 Score =  465 bits (1197), Expect = e-128
 Identities = 226/256 (88%), Positives = 241/256 (94%)
 Frame = -2

Query: 985 YLTRFNKLRNRVVGIIPARFASSRFPGKPLVQILGKPMIQRTWERAKLATTLDHVVVATD 806
           YL+R  K R+RV+GIIPARFASSRF GKPLVQILGKPMIQRTWERAKLATTLDH++VATD
Sbjct: 38  YLSRSRKFRSRVIGIIPARFASSRFQGKPLVQILGKPMIQRTWERAKLATTLDHIIVATD 97

Query: 805 DEKIADCCRQFGADVIMTSESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLVEPEIIDG 626
           DEKIA+CCR FGADVIMTSESCRNGTERCNEA+ KL KKYD+VVNIQGDEPL+EPEIIDG
Sbjct: 98  DEKIAECCRGFGADVIMTSESCRNGTERCNEAIGKLEKKYDVVVNIQGDEPLIEPEIIDG 157

Query: 625 VVKALQAAPDAVFSTAVTSLKPEDAHDSNRVKCVVDNHGYAIYFSRGLIPFNKSGKVNQH 446
           +VKALQ APDAVFSTAVTSLKPEDA D NRVKCVVDN GYAIYFSRGLIP+NKSGK+N  
Sbjct: 158 IVKALQEAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKSGKINPQ 217

Query: 445 FPYLLHLGIQSYDAKFLKIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDS 266
           FPYLLHLGIQSYDAKFLKIYP+LQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD+
Sbjct: 218 FPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDA 277

Query: 265 PEDVEKIESLMRERNL 218
           PEDVEKIE LMRE N+
Sbjct: 278 PEDVEKIERLMREHNV 293


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