BLASTX nr result

ID: Glycyrrhiza24_contig00003329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003329
         (1826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590425.1| DEAD-box ATP-dependent RNA helicase [Medicag...   752   0.0  
gb|AFK42096.1| unknown [Medicago truncatula]                          751   0.0  
ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   745   0.0  
ref|XP_003554752.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   743   0.0  
gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]         671   0.0  

>ref|XP_003590425.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355479473|gb|AES60676.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 491

 Score =  752 bits (1941), Expect = 0.0
 Identities = 383/481 (79%), Positives = 427/481 (88%), Gaps = 4/481 (0%)
 Frame = -2

Query: 1786 PPLANRSWADEAEEETDAPSSSGT-ETLSLSVDGLTIDENKKPPSKELDDPDDSNIQAVT 1610
            PP   +SWAD+A+EET+  S+S   ET SL+V+ LTIDE  K  SK LDDPDDSNI AVT
Sbjct: 10   PPPTTKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSLSKSLDDPDDSNITAVT 69

Query: 1609 SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 1430
            +GDTPYTSA  FE+LSLS  LLKG+YVEMKF+KPSKIQA SLPMILNPPHRDLIAQAHNG
Sbjct: 70   AGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNG 129

Query: 1429 SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 1250
            SGKTTCF LGMLSRVDP+++APQALCICPTRELA+QNIEVLRKMGKYTGISSECA+P D 
Sbjct: 130  SGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDR 189

Query: 1249 RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 1070
            RD   + KRAPI AQVVIGTPGT++  + +KKLGVT+LKILVFDEADQMLAEDGF++DSL
Sbjct: 190  RDSIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSL 249

Query: 1069 KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTV-KNDHNKLFVKKEELSLDAVKQYKVR 893
            +I+  I+K NS+CQVLLFSATFN+TVKNF +R V K +HN+LFVKKEELSLDAVKQYKV 
Sbjct: 250  RIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVL 309

Query: 892  CPDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEE 713
             PDEL KI+VIK+YIFELGENVGQTIIFVRTRNSAKMLHKALVD GYEVTSIQGAL+H +
Sbjct: 310  VPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVD 369

Query: 712  RDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYT--RELEPDYEVY 539
            RDKIVKEF+DGLTQVLISTDVLARGFDQQQVNLVINYDLPLKY+AEYT   E EPDYEVY
Sbjct: 370  RDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVY 429

Query: 538  LHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGL 359
            LHRVGRAGRFGRKGAVFNLIC ERDEK +SKIE HFGT++ EV+++SVEDYK ALK AGL
Sbjct: 430  LHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGL 489

Query: 358  L 356
            L
Sbjct: 490  L 490


>gb|AFK42096.1| unknown [Medicago truncatula]
          Length = 491

 Score =  751 bits (1939), Expect = 0.0
 Identities = 383/481 (79%), Positives = 427/481 (88%), Gaps = 4/481 (0%)
 Frame = -2

Query: 1786 PPLANRSWADEAEEETDAPSSSGT-ETLSLSVDGLTIDENKKPPSKELDDPDDSNIQAVT 1610
            PP   +SWAD+A+EET+  S+S   ET SL+V+ LTIDE  K  SK LDDPDDSNI AVT
Sbjct: 10   PPPTTKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSLSKSLDDPDDSNITAVT 69

Query: 1609 SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 1430
            +GDTPYTSA  FE+LSLS  LLKG+YVEMKF+KPSKIQA SLPMILNPPHRDLIAQAHNG
Sbjct: 70   AGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNG 129

Query: 1429 SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 1250
            SGKTTCF LGMLSRVDP+++APQALCICPTRELA+QNIEVLRKMGKYTGISSECA+P D 
Sbjct: 130  SGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDR 189

Query: 1249 RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 1070
            RD   + KRAPI AQVVIGTPGT++  + +KKLGVT+LKILVFDEADQMLAEDGF++DSL
Sbjct: 190  RDPIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSL 249

Query: 1069 KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTV-KNDHNKLFVKKEELSLDAVKQYKVR 893
            +I+  I+K NS+CQVLLFSATFN+TVKNF +R V K +HN+LFVKKEELSLDAVKQYKV 
Sbjct: 250  RIIKEIEKFNSSCQVLLFSATFNETVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVL 309

Query: 892  CPDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEE 713
             PDEL KI+VIK+YIFELGENVGQTIIFVRTRNSAKMLHKALVD GYEVTSIQGAL+H +
Sbjct: 310  VPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHVD 369

Query: 712  RDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYT--RELEPDYEVY 539
            RDKIVKEF+DGLTQVLISTDVLARGFDQQQVNLVINYDLPLKY+AEYT   E EPDYEVY
Sbjct: 370  RDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVY 429

Query: 538  LHRVGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGL 359
            LHRVGRAGRFGRKGAVFNLIC ERDEK +SKIE HFGT++ EV+++SVEDYK ALK AGL
Sbjct: 430  LHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGL 489

Query: 358  L 356
            L
Sbjct: 490  L 490


>ref|XP_003552095.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Glycine max]
          Length = 488

 Score =  745 bits (1924), Expect = 0.0
 Identities = 377/478 (78%), Positives = 429/478 (89%), Gaps = 1/478 (0%)
 Frame = -2

Query: 1786 PPL-ANRSWADEAEEETDAPSSSGTETLSLSVDGLTIDENKKPPSKELDDPDDSNIQAVT 1610
            PP+ A +SWADEA+EET+A S++  ET S++++ LTID+ +K  SK LDDPDDSNIQAVT
Sbjct: 16   PPVPATKSWADEADEETNA-STAEAETSSVNLEALTIDDKEKNSSKLLDDPDDSNIQAVT 74

Query: 1609 SGDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNG 1430
            SGDTPYTSAARFEDLSLS  LLKG+YVEMKF+KPSKIQAISLPMIL+PP+RDLIAQAHNG
Sbjct: 75   SGDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPNRDLIAQAHNG 134

Query: 1429 SGKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDS 1250
            SGKTTCFVLGMLSRVDP V+APQALCICPTRELA+QNIEVLR+MGKYTGI+SEC +P D 
Sbjct: 135  SGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNIEVLRRMGKYTGIASECLVPLD- 193

Query: 1249 RDGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSL 1070
            RD   ++KRAPI AQVVIGTPGT++K++ FKKLG TRL+ILVFDEADQMLAEDGF++DSL
Sbjct: 194  RDAVHVSKRAPIMAQVVIGTPGTVKKFISFKKLGTTRLRILVFDEADQMLAEDGFRDDSL 253

Query: 1069 KIMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRC 890
            +IM  I+K NS CQVLLFSATFNDTVKNFVSRTV+ DHNKLFVKKEELSLDAVKQYKV C
Sbjct: 254  RIMKDIEKENSKCQVLLFSATFNDTVKNFVSRTVRMDHNKLFVKKEELSLDAVKQYKVYC 313

Query: 889  PDELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEER 710
            PDEL+KI+V+KDYIFE+GENVGQTIIFVR++ +A++ H+ALV  GYEVTSIQG+L +EER
Sbjct: 314  PDELAKIDVVKDYIFEIGENVGQTIIFVRSKITARLTHEALVKLGYEVTSIQGSLSNEER 373

Query: 709  DKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHR 530
            DK+VKEF+DGLTQVLISTD+LARGFDQQQVNLVINYDLP KY        EPDYEVYLHR
Sbjct: 374  DKVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYDLPKKYGVRD----EPDYEVYLHR 429

Query: 529  VGRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGLL 356
            VGRAGRFGRKGAVFNLIC E DE+LMSKIENHFGT +TEVR +SVE+YK ALK AGLL
Sbjct: 430  VGRAGRFGRKGAVFNLICGELDERLMSKIENHFGTRVTEVRAQSVEEYKAALKEAGLL 487


>ref|XP_003554752.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 38-like [Glycine max]
          Length = 495

 Score =  743 bits (1919), Expect = 0.0
 Identities = 372/477 (77%), Positives = 427/477 (89%)
 Frame = -2

Query: 1786 PPLANRSWADEAEEETDAPSSSGTETLSLSVDGLTIDENKKPPSKELDDPDDSNIQAVTS 1607
            P    +SWADEA+EET+  S++ +E+ S++++ LTID+ +   SK LDDPDDSNIQAVTS
Sbjct: 23   PAPVTKSWADEADEETNNTSTAESESSSINLEALTIDDKENNSSKFLDDPDDSNIQAVTS 82

Query: 1606 GDTPYTSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNGS 1427
            GDTPYTSAARFEDLSLS  LLKG+YVEMKF+KPSKIQAISLPMIL+PPHRDLIAQAHNGS
Sbjct: 83   GDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSPPHRDLIAQAHNGS 142

Query: 1426 GKTTCFVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDSR 1247
            GKTTCFVLGMLSRVDP V+APQALC+CPTRELA+QN+EVLR+MGKYTGI+SEC +  D R
Sbjct: 143  GKTTCFVLGMLSRVDPKVQAPQALCVCPTRELAIQNVEVLRRMGKYTGIASECLVRLD-R 201

Query: 1246 DGTTIAKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSLK 1067
            D   ++KRAPI AQVVIGTPGTI+K++ FKKLG +RLKILVFDEADQMLA++GF++DSLK
Sbjct: 202  DAVHVSKRAPIMAQVVIGTPGTIKKFISFKKLGTSRLKILVFDEADQMLAQEGFRDDSLK 261

Query: 1066 IMNAIKKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRCP 887
            IM  I+K N  CQVLLFSATFNDTVKNF+SRTVK DHNKLFVKKEELSLDAVKQYKV CP
Sbjct: 262  IMKDIEKDNKKCQVLLFSATFNDTVKNFISRTVKMDHNKLFVKKEELSLDAVKQYKVYCP 321

Query: 886  DELSKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEERD 707
            DEL+KI+VIKDYIFE+GENVGQTIIF+ TR+SA++LH+ALV+ GYEVTSIQG+L +EERD
Sbjct: 322  DELAKIDVIKDYIFEIGENVGQTIIFMATRDSARLLHQALVNLGYEVTSIQGSLSNEERD 381

Query: 706  KIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHRV 527
            K+VKEF+DGLTQVLISTD+LARGFDQQQVNLVINY+LP K+S       EPDYEVYLHRV
Sbjct: 382  KVVKEFKDGLTQVLISTDILARGFDQQQVNLVINYNLPNKHSLRD----EPDYEVYLHRV 437

Query: 526  GRAGRFGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVREKSVEDYKGALKAAGLL 356
            GRAGRFGRKGAVFNLICDE DE+LMSKIENHFGT +TEVR +SVE+YK ALK AGLL
Sbjct: 438  GRAGRFGRKGAVFNLICDENDERLMSKIENHFGTCVTEVRAQSVEEYKAALKEAGLL 494


>gb|ADG27844.1| RNA helicase-like protein [Gossypium hirsutum]
          Length = 501

 Score =  671 bits (1730), Expect = 0.0
 Identities = 341/473 (72%), Positives = 403/473 (85%), Gaps = 3/473 (0%)
 Frame = -2

Query: 1765 WADEAEEETDAPSSSGTE--TLSLSVDGLTIDENKKPPSKELDDPDDSNIQAVTSGDTPY 1592
            WAD  +E ++ PS+   +     L V+ L IDE+KK  +K LD+P+DSNI+AVT+G+TPY
Sbjct: 34   WADLEDEASEEPSALSEDKGAPELGVENLKIDESKKI-NKFLDEPEDSNIKAVTAGETPY 92

Query: 1591 TSAARFEDLSLSETLLKGIYVEMKFDKPSKIQAISLPMILNPPHRDLIAQAHNGSGKTTC 1412
            TSA  FE+L+LS  LLKG+YVEMKF+KPSKIQAISLPMIL PPH DLIAQAHNGSGKTTC
Sbjct: 93   TSAFTFEELNLSPELLKGLYVEMKFEKPSKIQAISLPMILTPPHLDLIAQAHNGSGKTTC 152

Query: 1411 FVLGMLSRVDPDVKAPQALCICPTRELALQNIEVLRKMGKYTGISSECAIPKDSRDGTTI 1232
            F LGMLSRVDP++KAPQALCICPTRELA+QN+EVLRKMGK+TGI+SECAIP DS +   I
Sbjct: 153  FTLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAIPMDSSNYIPI 212

Query: 1231 AKRAPITAQVVIGTPGTIQKWMGFKKLGVTRLKILVFDEADQMLAEDGFKEDSLKIMNAI 1052
             KRAPI AQVVIGTPGTI+KWM  KKLGV+ +K+LVFDEAD MLAEDGFK+DSL+IM  I
Sbjct: 213  NKRAPIIAQVVIGTPGTIKKWMSAKKLGVSNVKVLVFDEADHMLAEDGFKDDSLRIMRDI 272

Query: 1051 KKSNSNCQVLLFSATFNDTVKNFVSRTVKNDHNKLFVKKEELSLDAVKQYKVRCPDELSK 872
            +K +S+CQVLLFSATF+DTVKNFVS+ VK DHN+LFVKKEELSL++VKQYKV  PDELSK
Sbjct: 273  EKMSSHCQVLLFSATFSDTVKNFVSKIVKRDHNQLFVKKEELSLESVKQYKVNVPDELSK 332

Query: 871  IEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKALVDFGYEVTSIQGALEHEERDKIVKE 692
            + VIKD I E GE +GQTIIFVRTRNSA MLHKALV+FGY+VT+IQGAL   ERDKIVKE
Sbjct: 333  VLVIKDRILEFGERLGQTIIFVRTRNSASMLHKALVEFGYDVTTIQGALNQAERDKIVKE 392

Query: 691  FRDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRELEPDYEVYLHRVGRAGR 512
            F+DGLTQVLISTD+LARGFDQQQVNLVINYDLP+K+       +EPD EVYLHR+GRAGR
Sbjct: 393  FKDGLTQVLISTDLLARGFDQQQVNLVINYDLPVKHD----NRVEPDCEVYLHRIGRAGR 448

Query: 511  FGRKGAVFNLICDERDEKLMSKIENHFGTHLTEVRE-KSVEDYKGALKAAGLL 356
            FGRKGAVFNL+C + D+ ++SKIENHF + + EV + ++ ED+K AL++AGLL
Sbjct: 449  FGRKGAVFNLLCGDMDQMIISKIENHFDSKIAEVPDWRNEEDFKAALRSAGLL 501


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