BLASTX nr result

ID: Glycyrrhiza24_contig00003254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003254
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] ...   452   e-124
ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycin...   445   e-122
ref|XP_003538687.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like pr...   430   e-118
emb|CBI34418.3| unnamed protein product [Vitis vinifera]              412   e-112
ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplasti...   412   e-112

>ref|XP_003611045.1| Transmembrane protein [Medicago truncatula]
            gi|355512380|gb|AES94003.1| Transmembrane protein
            [Medicago truncatula]
          Length = 403

 Score =  452 bits (1162), Expect = e-124
 Identities = 257/341 (75%), Positives = 279/341 (81%), Gaps = 7/341 (2%)
 Frame = -2

Query: 1221 FARSPISSCIF-----RNEIKL--RMLLSEPPRGTGGFTRAYKHCSAASNNRHHSVAENS 1063
            F  S ISS IF     R  +KL  R   +   R T GF RA         +   SVAENS
Sbjct: 79   FTTSLISSSIFPPPTPRCNLKLPPRFQFTNIFRSTTGFVRA---------SEDDSVAENS 129

Query: 1062 NWERHLAPPIVSSAGDKGSIGLVKFMLFFAFLTLQDSYPXXXXXXASDFATGLNSVPIFG 883
            + +  LA   VSS  D  S+ ++KFMLF AF  LQD++P       SDFATGLNS+PIFG
Sbjct: 130  DSQCQLATQNVSS--DDASMTVLKFMLFSAFFALQDAFPAVAA---SDFATGLNSIPIFG 184

Query: 882  DIGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFLGTFGALAAMTLISVALG 703
            D+GDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSA VVF+GTFGALAAMT+ISVALG
Sbjct: 185  DVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALG 244

Query: 702  RTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSNGQKSDDEQKEAELAV 523
            RTFHYVDE+LPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSS+ QKSDDEQKEAELAV
Sbjct: 245  RTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAV 304

Query: 522  SDFSGNGAGILAAAGTVVSTFLVVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVA 343
            SDFSG+GAGILAAA T+VSTFL+VFVAEWGDKSFFSTI    +SSPLGVIAGSLAGHGVA
Sbjct: 305  SDFSGDGAGILAAASTIVSTFLLVFVAEWGDKSFFSTI--GESSSPLGVIAGSLAGHGVA 362

Query: 342  TLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTLFEIVQ 220
            TL+AVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVT+FEIVQ
Sbjct: 363  TLIAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ 403


>ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max]
            gi|255636411|gb|ACU18544.1| unknown [Glycine max]
          Length = 347

 Score =  445 bits (1144), Expect = e-122
 Identities = 247/306 (80%), Positives = 263/306 (85%), Gaps = 3/306 (0%)
 Frame = -2

Query: 1128 TRAYKHCSAASNNRHHSVAENSNWERHLAPPIVSS---AGDKGSIGLVKFMLFFAFLTLQ 958
            T+ YK+    SNN   S+A  SN +  LA P+VSS   A    S  L+  ML FAFLTLQ
Sbjct: 54   TQPYKN----SNNSSQSLAHISNCKFPLARPLVSSSHPASTNSSTKLLNSMLLFAFLTLQ 109

Query: 957  DSYPXXXXXXASDFATGLNSVPIFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAAR 778
             SYP       SDF+T      IFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAAR
Sbjct: 110  PSYPALAAS--SDFST------IFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAAR 161

Query: 777  NSAGVVFLGTFGALAAMTLISVALGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGV 598
            NSAGVVF+GTFGALAAMTLISV LGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGV
Sbjct: 162  NSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGV 221

Query: 597  STLLDASSSNGQKSDDEQKEAELAVSDFSGNGAGILAAAGTVVSTFLVVFVAEWGDKSFF 418
            STLLDASSS+GQKSD+EQKEAELAVS+FSGNGAGIL+AA TV STFL+VFVAEWGDKSFF
Sbjct: 222  STLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAASTVASTFLLVFVAEWGDKSFF 281

Query: 417  STIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVT 238
            STIALAAASSPLGVIAG+LAGHGVATLLAVLGGSLLGT+LSEKVIAYIGGVLFLVFAA+T
Sbjct: 282  STIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKVIAYIGGVLFLVFAAIT 341

Query: 237  LFEIVQ 220
            LFEIVQ
Sbjct: 342  LFEIVQ 347


>ref|XP_003538687.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 1,
            chloroplastic-like, partial [Glycine max]
          Length = 321

 Score =  430 bits (1105), Expect = e-118
 Identities = 244/312 (78%), Positives = 261/312 (83%), Gaps = 9/312 (2%)
 Frame = -2

Query: 1128 TRAYKHCSAASNNRHHSVAENSNWERHLAPP----IVSSAGD---KGSIGLVKFMLFFAF 970
            T+AY++    SNN   S+A  SNW+  L PP    +VSS+       S  L+ FML F F
Sbjct: 22   TQAYRN----SNNSPGSLAHISNWKFSLPPPPPPPLVSSSAPAITNLSTKLLNFMLLFGF 77

Query: 969  LTLQDSYPXXXXXXASDFATGLNSVPIFGDIGDLSTGFASAFLLIFFSELGDKTFFIAAL 790
            LTLQDSYP       SD +T      IFGDIGDLSTGFASAFLLIFFSELGDKTFFIAAL
Sbjct: 78   LTLQDSYPALASS--SDIST------IFGDIGDLSTGFASAFLLIFFSELGDKTFFIAAL 129

Query: 789  LAARNSAGVVFLGTFGALAAMTLISVALGRTFHYVDEILPFRFGETDLPIDDIAAVCLLV 610
            LAARNSAGVVF+GTFGALAAMTLISV LGRTFHYVDEILPFRF ETDLPIDDIAAV LLV
Sbjct: 130  LAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFXETDLPIDDIAAVGLLV 189

Query: 609  YFGVSTLLDASSSNGQKSDDEQKEA--ELAVSDFSGNGAGILAAAGTVVSTFLVVFVAEW 436
            YFGVSTLLDASSS+ QKSD+EQKE   ELAVSDFSGNGAGIL+AA TV STFL+VFVAEW
Sbjct: 190  YFGVSTLLDASSSDSQKSDEEQKEIIFELAVSDFSGNGAGILSAASTVASTFLLVFVAEW 249

Query: 435  GDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFL 256
            GDKSFFSTIALAAASSPLGVIAG+LAGHGVATLLAVLGGSLLGT+LSEKVIAYIGGVLFL
Sbjct: 250  GDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSEKVIAYIGGVLFL 309

Query: 255  VFAAVTLFEIVQ 220
            VFAA+TLFEIVQ
Sbjct: 310  VFAAITLFEIVQ 321


>emb|CBI34418.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  412 bits (1060), Expect = e-112
 Identities = 215/260 (82%), Positives = 234/260 (90%)
 Frame = -2

Query: 1002 GLVKFMLFFAFLTLQDSYPXXXXXXASDFATGLNSVPIFGDIGDLSTGFASAFLLIFFSE 823
            GL+KFML F FLTLQDS         SDFA+GL      GD+GD+STGF SAFLLIFFSE
Sbjct: 136  GLLKFMLVFGFLTLQDSQQAVAG---SDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSE 192

Query: 822  LGDKTFFIAALLAARNSAGVVFLGTFGALAAMTLISVALGRTFHYVDEILPFRFGETDLP 643
            LGDKTFFIAALLAARNS  VVF+GTFGALA MT+ISV LGRTFHYVDEILPFRFGETDLP
Sbjct: 193  LGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLP 252

Query: 642  IDDIAAVCLLVYFGVSTLLDASSSNGQKSDDEQKEAELAVSDFSGNGAGILAAAGTVVST 463
            IDDIAAVCLLVYFGVSTLL+A+SSNG K+++EQKEAE+AVS+FSGNGAGIL++A TV+ST
Sbjct: 253  IDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVIST 312

Query: 462  FLVVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVI 283
            FL+VFVAEWGDKSFFSTIALAAASSPLGVI G+LAGHGVATLLAVLGGSLLGTFLSEKVI
Sbjct: 313  FLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVI 372

Query: 282  AYIGGVLFLVFAAVTLFEIV 223
            AYIGGVLFL+FAAVTL EIV
Sbjct: 373  AYIGGVLFLIFAAVTLIEIV 392


>ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]
          Length = 260

 Score =  412 bits (1060), Expect = e-112
 Identities = 215/260 (82%), Positives = 234/260 (90%)
 Frame = -2

Query: 1002 GLVKFMLFFAFLTLQDSYPXXXXXXASDFATGLNSVPIFGDIGDLSTGFASAFLLIFFSE 823
            GL+KFML F FLTLQDS         SDFA+GL      GD+GD+STGF SAFLLIFFSE
Sbjct: 3    GLLKFMLVFGFLTLQDSQQAVAG---SDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSE 59

Query: 822  LGDKTFFIAALLAARNSAGVVFLGTFGALAAMTLISVALGRTFHYVDEILPFRFGETDLP 643
            LGDKTFFIAALLAARNS  VVF+GTFGALA MT+ISV LGRTFHYVDEILPFRFGETDLP
Sbjct: 60   LGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLP 119

Query: 642  IDDIAAVCLLVYFGVSTLLDASSSNGQKSDDEQKEAELAVSDFSGNGAGILAAAGTVVST 463
            IDDIAAVCLLVYFGVSTLL+A+SSNG K+++EQKEAE+AVS+FSGNGAGIL++A TV+ST
Sbjct: 120  IDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVIST 179

Query: 462  FLVVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLLAVLGGSLLGTFLSEKVI 283
            FL+VFVAEWGDKSFFSTIALAAASSPLGVI G+LAGHGVATLLAVLGGSLLGTFLSEKVI
Sbjct: 180  FLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVI 239

Query: 282  AYIGGVLFLVFAAVTLFEIV 223
            AYIGGVLFL+FAAVTL EIV
Sbjct: 240  AYIGGVLFLIFAAVTLIEIV 259


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