BLASTX nr result

ID: Glycyrrhiza24_contig00003247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003247
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38427.3| unnamed protein product [Vitis vinifera]              259   1e-66
ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|2...   252   1e-64
ref|XP_002532882.1| conserved hypothetical protein [Ricinus comm...   248   3e-63
gb|ABR18048.1| unknown [Picea sitchensis]                             195   2e-47
ref|XP_002520169.1| conserved hypothetical protein [Ricinus comm...   144   6e-32

>emb|CBI38427.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  259 bits (661), Expect = 1e-66
 Identities = 140/292 (47%), Positives = 167/292 (57%), Gaps = 8/292 (2%)
 Frame = +3

Query: 180  PVCRDTCGSVQVKYPFGTGPGCGSPVFNQYITCTSS----DQLILKTHTGXXXXXXXXXX 347
            P CRDTCGS+ VK+PFGTG GCGSP F  YI+C+ S    DQL+L+THTG          
Sbjct: 27   PACRDTCGSLSVKFPFGTGVGCGSPRFQPYISCSQSSDGGDQLLLRTHTGVYPITSISYE 86

Query: 348  XXXXXXXXXHMSTCTTMQPLYPSSSNNFGLDLTSPFQIGSSTFILLSCTHPHPIIT---- 515
                      MS CT+MQP     S N GLD  SPFQ+G S FILLSC    P +T    
Sbjct: 87   AAAFTVTPPLMSNCTSMQP-----SPNLGLDWASPFQLGPSAFILLSCP---PSLTSKAS 138

Query: 516  PQICDPSFDYLCASIYSCPAVIHLGLPLFPPPTNTCCVYSPANXXXXXXXXXXXIGCGAY 695
            P ICDPS  +LCASIY+CP+V+ LGLPLFPP TN+CCVYSPAN           + C AY
Sbjct: 139  PPICDPSLSHLCASIYTCPSVVSLGLPLFPP-TNSCCVYSPANFNTKGELDLHALKCAAY 197

Query: 696  TSVVSLGDNPTDPTHWVYGVALKYSHGAIDNNFVSTKXXXXXXXXXXXXFAPPGNGFVCV 875
             SVV+LGD PTDPT W YGV  KY+ G  DN  + TK            +APP N FVCV
Sbjct: 198  ASVVTLGDYPTDPTRWEYGVVFKYTQGKFDNYGMDTKCYACDSSGGVCGYAPPSNSFVCV 257

Query: 876  CKSGFNTSLDCSGTYNQNQGYLWDDSVSPPCFSTTPGNVWSFVLAGIILSLV 1031
            C +GFNTS +C+G    +   +W     P          W  +LA ++  LV
Sbjct: 258  CGNGFNTSSNCNG---YSFAGIWSSGSRP------TRKAWWGILAWLVFWLV 300


>ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|222852876|gb|EEE90423.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  252 bits (643), Expect = 1e-64
 Identities = 137/280 (48%), Positives = 164/280 (58%), Gaps = 4/280 (1%)
 Frame = +3

Query: 186  CRDTCGSVQVKYPFGTGPGCGSPVFNQYITCT-SSDQLILKTHTGXXXXXXXXXXXXXXX 362
            CR TCGS+QVKYPFG+G GCGSP F+ YI C+   DQL+L THTG               
Sbjct: 33   CRTTCGSIQVKYPFGSGHGCGSPRFHPYIACSPEGDQLLLTTHTGSYPITSISYTTSTFI 92

Query: 363  XXXXHMSTCTTMQPLYPSSSNNFGLDLTSPFQIGSSTFILLSCTHPHPIITPQ---ICDP 533
                HMSTCT+MQ      S N GLD  SPFQ+GSSTF+LLSCT P   +  +   +CD 
Sbjct: 93   ITPPHMSTCTSMQ-----QSPNLGLDWASPFQLGSSTFLLLSCTPPTSSLNIKGSPVCDT 147

Query: 534  SFDYLCASIYSCPAVIHLGLPLFPPPTNTCCVYSPANXXXXXXXXXXXIGCGAYTSVVSL 713
            S  YLCASIY+CP+VI LGLPLFPP TNTCCVYSPAN           + C  Y SVVSL
Sbjct: 148  S-SYLCASIYTCPSVIGLGLPLFPP-TNTCCVYSPANFNSKGELDLQKLKCMGYASVVSL 205

Query: 714  GDNPTDPTHWVYGVALKYSHGAIDNNFVSTKXXXXXXXXXXXXFAPPGNGFVCVCKSGFN 893
             ++PTDP+ W YGV LK   GA+D+ ++  K            +APP N FVCVC    N
Sbjct: 206  QEHPTDPSQWQYGVELKSRGGALDDYYIDNKCNTCEISGGVCGYAPPVNSFVCVCSDTIN 265

Query: 894  TSLDCSGTYNQNQGYLWDDSVSPPCFSTTPGNVWSFVLAG 1013
            T++DC+    QNQ  L  +SVS P      G +   V  G
Sbjct: 266  TTMDCNARSLQNQPELTWNSVSLPSRKLWMGFLGGLVFVG 305


>ref|XP_002532882.1| conserved hypothetical protein [Ricinus communis]
            gi|223527367|gb|EEF29511.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 302

 Score =  248 bits (632), Expect = 3e-63
 Identities = 135/283 (47%), Positives = 163/283 (57%), Gaps = 5/283 (1%)
 Frame = +3

Query: 186  CRDTCGSVQVKYPFGTGPGCGSPVFNQYITCTSS-DQLILKTHTGXXXXXXXXXXXXXXX 362
            CR TCGS+QVKYPFGT  GCGSP F  YITC S  DQL+L THTG               
Sbjct: 29   CRTTCGSLQVKYPFGTAYGCGSPRFYPYITCASGGDQLLLTTHTGSYPITSISYTATTIT 88

Query: 363  XXXXHMSTCTTMQPLYPSSSNNFGLDLTSPFQIGSSTFILLSCTHPHPIITPQ---ICDP 533
                 MSTCT+M       S N GLD  SPFQ+G STF+LLSC  P   +T +   +CD 
Sbjct: 89   ISPPSMSTCTSMH-----QSPNLGLDWASPFQLGPSTFLLLSCPPPTSSLTMKGSPVCDA 143

Query: 534  SFDYLCASIYSCPAVIHLGLPLFPPPTNTCCVYSPANXXXXXXXXXXXIGCGAYTSVVSL 713
            S  YLCASIY+CP+VI LGLPLFPP TNTCCVY+PAN           + C  Y S++SL
Sbjct: 144  SSSYLCASIYTCPSVIGLGLPLFPP-TNTCCVYAPANFNGKSELDLHMLKCSGYASIISL 202

Query: 714  GDNPTDPTHWVYGVALKYSHGAIDNNFVSTKXXXXXXXXXXXXFAPPGNGFVCVCKSGFN 893
             D PTDPT W YGV L Y  GA D+ ++ TK            +A PG  F+C+C SG N
Sbjct: 203  QDYPTDPTRWEYGVVLNYRSGAFDDFYMDTKCNTCESSGGVCGYAAPGYSFLCLCNSGIN 262

Query: 894  TSLDCSGTYNQNQGYLWDDSVSP-PCFSTTPGNVWSFVLAGII 1019
            T+ DC+  Y+Q       D V P    ST+   +W  +LAG++
Sbjct: 263  TTTDCN-AYSQ-------DVVFPSSSVSTSSWKMWLGILAGLV 297


>gb|ABR18048.1| unknown [Picea sitchensis]
          Length = 323

 Score =  195 bits (496), Expect = 2e-47
 Identities = 106/284 (37%), Positives = 152/284 (53%), Gaps = 2/284 (0%)
 Frame = +3

Query: 186  CRDTCGSVQVKYPFGTGPGCGSPVFNQYITCTSSDQLILKTHTGXXXXXXXXXXXXXXXX 365
            CRDTCG++QVKYPFGTGPGCG P F   ++C +  +L+  TH+G                
Sbjct: 54   CRDTCGNLQVKYPFGTGPGCGDPRFQNSVSCVNQ-KLMFTTHSGSYPISSIDYSQTTIYL 112

Query: 366  XXXHMSTCTTMQPLYPSSSNNFGLDLTSPFQIGSSTFILLSCTHPHPIITPQ--ICDPSF 539
                MSTC  M     +SS +FGLD  +PF+  +  F+LL+C+    + +P   +CD   
Sbjct: 113  ADPQMSTCAAM-----TSSGSFGLDAAAPFKFKNDIFVLLNCSLSSCLYSPTNYLCDTGS 167

Query: 540  DYLCASIYSCPAVIHLGLPLFPPPTNTCCVYSPANXXXXXXXXXXXIGCGAYTSVVSLGD 719
              +C+S+Y+CP V+ LGL  + P  +TCCVY+P N           + C +YTS+ S GD
Sbjct: 168  SQICSSLYTCPGVLGLGLQQYSP-ISTCCVYAPINLGSAAEINLAKLQCQSYTSIYSFGD 226

Query: 720  NPTDPTHWVYGVALKYSHGAIDNNFVSTKXXXXXXXXXXXXFAPPGNGFVCVCKSGFNTS 899
            + TDPT W YG+ALKYS   +DN+   T             F    N F CVC++G NT+
Sbjct: 227  DATDPTRWNYGIALKYSFN-LDNSNFPTACVSCEQSKGVCGFTGMYNSFTCVCRNGVNTT 285

Query: 900  LDCSGTYNQNQGYLWDDSVSPPCFSTTPGNVWSFVLAGIILSLV 1031
             +C+G     Q Y W  + S     +    +W   +AGI+L++V
Sbjct: 286  TNCNG-----QEYYWSRAQS---HRSAAFGLW---IAGIVLAIV 318


>ref|XP_002520169.1| conserved hypothetical protein [Ricinus communis]
            gi|223540661|gb|EEF42224.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 304

 Score =  144 bits (362), Expect = 6e-32
 Identities = 97/294 (32%), Positives = 128/294 (43%), Gaps = 21/294 (7%)
 Frame = +3

Query: 186  CRDTCGSVQVKYPFGTGPGCGSPVFNQYITCTSSDQLILKTHTGXXXXXXXXXXXXXXXX 365
            C+++CG + VKYPFGTG GCG P   +Y+TC + D+L L THTG                
Sbjct: 30   CKNSCGKIPVKYPFGTGLGCGDPRLQKYVTC-NQDKLTLTTHTGCYPVTNIDYTNQVIYI 88

Query: 366  XXXHMSTCTTMQPLYPSSSNNFGLDLTSPFQIGSST-FILLSC-THPHPI---------- 509
                MSTC   QP     S  FGLD  +PF     T F LL C T   PI          
Sbjct: 89   SDPSMSTCACTQP-----SKGFGLDWDAPFSFCDDTVFTLLDCSTSSSPIYRTNTNSDSN 143

Query: 510  --ITPQICDPSFDYLCASIYSCPAVIHLGLPLFPPPTNTCCVYSPANXXXXXXXXXXXIG 683
              I PQ CD +   +C+ +YSC A+  L LP+     +TCCVY+P +           + 
Sbjct: 144  ATIVPQ-CDRTGAPICSFLYSCQAISMLNLPI-----STCCVYTPVDLGPSFEMDLEKLQ 197

Query: 684  CGAYTSVVSLGDNPTDPTHWVYGVALKYSHGAIDNNFVSTKXXXXXXXXXXXXFAPPGNG 863
            C +Y+   S      +P +W YG+ALKY       N   T             +    N 
Sbjct: 198  CRSYSGFYSFSGQKANPENWKYGIALKYKFNVY--NDYPTSCANCEKSDGVCGYGGAFNS 255

Query: 864  FVCVCKSGFNTSLDCSGTYNQNQG---YLWDDSV----SPPCFSTTPGNVWSFV 1004
            FVC C +G NT+ DC    + N G   + W        S  CF      VW+F+
Sbjct: 256  FVCNCPNGLNTTSDCLFGASYNHGSSLFPWQTGTWLIYSLACFL-----VWAFL 304


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