BLASTX nr result

ID: Glycyrrhiza24_contig00003246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003246
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136113.1| PREDICTED: uncharacterized protein LOC101209...   118   6e-25
ref|XP_001177217.2| PREDICTED: histone H3, embryonic-like [Stron...   115   3e-24
gb|AAO06264.1| histone protein Hist2h3c1 [Mus musculus] gi|62739...   115   4e-24
ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   115   4e-24
ref|XP_002721686.1| PREDICTED: histone H3-like [Oryctolagus cuni...   115   4e-24

>ref|XP_004136113.1| PREDICTED: uncharacterized protein LOC101209420 [Cucumis sativus]
          Length = 274

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/67 (89%), Positives = 61/67 (91%)
 Frame = +2

Query: 2   AVRIQSSRIFLMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 181
           A RI+  R   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL
Sbjct: 128 ARRIRGERFARMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVAL 187

Query: 182 REIRKYQ 202
           REIRKYQ
Sbjct: 188 REIRKYQ 194



 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/56 (100%), Positives = 56/56 (100%)
 Frame = +2

Query: 35  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 202
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 56


>ref|XP_001177217.2| PREDICTED: histone H3, embryonic-like [Strongylocentrotus
           purpuratus] gi|390369621|ref|XP_794816.3| PREDICTED:
           histone H3, embryonic-like [Strongylocentrotus
           purpuratus]
          Length = 145

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +2

Query: 11  IQSSRIFLMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 190
           I  S IF MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREI
Sbjct: 2   IALSSIFSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREI 61

Query: 191 RKYQ 202
           R+YQ
Sbjct: 62  RRYQ 65


>gb|AAO06264.1| histone protein Hist2h3c1 [Mus musculus] gi|62739244|gb|AAH94041.1|
           Histone cluster 2, H3c1 [Mus musculus]
           gi|148706930|gb|EDL38877.1| mCG140445 [Mus musculus]
          Length = 181

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +2

Query: 20  SRIFLMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 199
           S +F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+Y
Sbjct: 41  SSVFAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRY 100

Query: 200 Q 202
           Q
Sbjct: 101 Q 101


>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = +2

Query: 26  IFLMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 202
           +F MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 97  LFPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 155


>ref|XP_002721686.1| PREDICTED: histone H3-like [Oryctolagus cuniculus]
          Length = 224

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/61 (93%), Positives = 59/61 (96%)
 Frame = +2

Query: 20  SRIFLMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 199
           S IF MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+Y
Sbjct: 84  SGIFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRY 143

Query: 200 Q 202
           Q
Sbjct: 144 Q 144


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