BLASTX nr result

ID: Glycyrrhiza24_contig00003245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003245
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]                          265   6e-69
ref|XP_002725328.2| PREDICTED: uncharacterized protein LOC680498...   265   6e-69
gb|AFW58221.1| histone H3.2 [Zea mays]                                265   8e-69
ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   264   1e-68
ref|XP_003612851.1| Histone H3 [Medicago truncatula] gi|35551418...   263   2e-68

>tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]
          Length = 245

 Score =  265 bits (677), Expect = 6e-69
 Identities = 138/143 (96%), Positives = 139/143 (97%)
 Frame = +1

Query: 64  PFFQRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR 243
           P  Q S MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR
Sbjct: 103 PCPQPSPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR 162

Query: 244 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAI 423
           KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAI
Sbjct: 163 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAI 222

Query: 424 HAKRVTIMPKDIQLARRIRGERA 492
           HAKRVTIMPKDIQLARRIRGERA
Sbjct: 223 HAKRVTIMPKDIQLARRIRGERA 245


>ref|XP_002725328.2| PREDICTED: uncharacterized protein LOC680498 [Rattus norvegicus]
           gi|392354401|ref|XP_001057443.2| PREDICTED:
           uncharacterized protein LOC680498 [Rattus norvegicus]
          Length = 325

 Score =  265 bits (677), Expect = 6e-69
 Identities = 136/140 (97%), Positives = 138/140 (98%)
 Frame = +1

Query: 73  QRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 252
           QRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQ
Sbjct: 186 QRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQ 245

Query: 253 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 432
           KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA EAYLVGLFEDTNLCAIHAK
Sbjct: 246 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAK 305

Query: 433 RVTIMPKDIQLARRIRGERA 492
           RVTIMPKDIQLARRIRGERA
Sbjct: 306 RVTIMPKDIQLARRIRGERA 325



 Score =  258 bits (658), Expect = 1e-66
 Identities = 132/136 (97%), Positives = 135/136 (99%)
 Frame = +1

Query: 85  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 264
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 265 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 444
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVIALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 445 MPKDIQLARRIRGERA 492
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136


>gb|AFW58221.1| histone H3.2 [Zea mays]
          Length = 171

 Score =  265 bits (676), Expect = 8e-69
 Identities = 137/140 (97%), Positives = 138/140 (98%)
 Frame = +1

Query: 73  QRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 252
           Q S MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 32  QLSPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 91

Query: 253 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 432
           KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAK
Sbjct: 92  KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAK 151

Query: 433 RVTIMPKDIQLARRIRGERA 492
           RVTIMPKDIQLARRIRGERA
Sbjct: 152 RVTIMPKDIQLARRIRGERA 171


>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  264 bits (674), Expect = 1e-68
 Identities = 137/141 (97%), Positives = 137/141 (97%)
 Frame = +1

Query: 70  FQRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 249
           F    MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY
Sbjct: 95  FSLFPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKY 154

Query: 250 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHA 429
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 155 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHA 214

Query: 430 KRVTIMPKDIQLARRIRGERA 492
           KRVTIMPKDIQLARRIRGERA
Sbjct: 215 KRVTIMPKDIQLARRIRGERA 235


>ref|XP_003612851.1| Histone H3 [Medicago truncatula] gi|355514186|gb|AES95809.1|
           Histone H3 [Medicago truncatula]
          Length = 223

 Score =  263 bits (673), Expect = 2e-68
 Identities = 137/141 (97%), Positives = 138/141 (97%)
 Frame = +1

Query: 85  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 264
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 265 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 444
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 445 MPKDIQLARRIRGERA*SSSL 507
           MPKDIQLARRIRGER   +SL
Sbjct: 121 MPKDIQLARRIRGERMGKNSL 141


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