BLASTX nr result

ID: Glycyrrhiza24_contig00003233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003233
         (1624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-li...   691   0.0  
ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-li...   632   e-179
ref|XP_003589939.1| Peptide chain release factor [Medicago trunc...   602   e-169
ref|XP_003518157.1| PREDICTED: peptide chain release factor 2-li...   575   e-162
emb|CBI30066.3| unnamed protein product [Vitis vinifera]              483   e-134

>ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 427

 Score =  691 bits (1784), Expect = 0.0
 Identities = 349/426 (81%), Positives = 381/426 (89%)
 Frame = -3

Query: 1493 MVMAATVFSEPAACARTAYDVASSFSSKWQSSLVRKKNPRTGLLLCSSRIRACHSMANNK 1314
            MVMA TV SEPA CART +DVASSFSSKWQ S   KK PR  +  CS RIRAC SMAN K
Sbjct: 1    MVMA-TVGSEPA-CARTVHDVASSFSSKWQHSSTVKKQPRARIPQCSLRIRACSSMANKK 58

Query: 1313 DIYKQVGLFSLRRKIEDAVLRAEMFASTALEMEEAMWTKQEEIVRDFDLWDDPAKSNDIL 1134
            DIY QVGLFSL+RKIEDAVLRAEMFASTALEMEEA W KQEE+VRDFD+WDDPAKSNDIL
Sbjct: 59   DIYNQVGLFSLKRKIEDAVLRAEMFASTALEMEEATWIKQEEMVRDFDMWDDPAKSNDIL 118

Query: 1133 VKLANSAKAVASLKDVRYKVEEAKLINQLAEMNVIDYGLYKQAYDASLDVGNILDQYEMS 954
            VKLANSAK V SLKD++YKVEEAKLINQLAE+N IDYGLYKQAY+ SLDV  I+D YE+S
Sbjct: 119  VKLANSAKVVDSLKDLKYKVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDLYEIS 178

Query: 953  KLLKGPFDMAGACLVIKAGSSGIYPKVWAEQLLSMYLRWAERQGYEGRIVDSCPFQNGGI 774
            KLLKGPFDMAGACLVIKAG  G+YPK+WAEQ+LSMYLRWA+RQGYEGRIVD C ++NGGI
Sbjct: 179  KLLKGPFDMAGACLVIKAGPKGMYPKLWAEQILSMYLRWAKRQGYEGRIVDKCLYKNGGI 238

Query: 773  ISASVEFEFECAYGYLSGEKGVHHLIRGSPNESSQLETSSATVDVIPMFFENARDLEIDS 594
             SA +EFEFECAYGYLSGEKGVH+LIRGSPNESSQLE SSATVDVIPMF E+A DLEIDS
Sbjct: 239  NSAIIEFEFECAYGYLSGEKGVHYLIRGSPNESSQLEASSATVDVIPMFLESACDLEIDS 298

Query: 593  EDLIISSPLIHGEQKRQTEHTVCIQHLPTGISVQSSGERSHFANKMKAINRLKAKLQVIA 414
            EDLIISSPLIHG+ KRQT+HTVCIQH+PTGISVQS GERSHFANKMKA+NRLKAKL V  
Sbjct: 299  EDLIISSPLIHGKNKRQTDHTVCIQHIPTGISVQSYGERSHFANKMKALNRLKAKLLVTT 358

Query: 413  REQGVASINSIRKDDIVNLWQEETRRYVSHPYKLVHDVKTGIETSDLNSVLDGNIGPLIA 234
            +EQGVASI SI+K++IVNLWQEE RRYVSHP+KLVHDVKTG+E  DLN VL+GNIGPLIA
Sbjct: 359  KEQGVASIKSIQKENIVNLWQEEIRRYVSHPHKLVHDVKTGVEVPDLNYVLEGNIGPLIA 418

Query: 233  AHINTR 216
            AHIN+R
Sbjct: 419  AHINSR 424


>ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 437

 Score =  632 bits (1630), Expect = e-179
 Identities = 320/386 (82%), Positives = 347/386 (89%)
 Frame = -3

Query: 1493 MVMAATVFSEPAACARTAYDVASSFSSKWQSSLVRKKNPRTGLLLCSSRIRACHSMANNK 1314
            MVMA TV SEPA CART +DVASSFSSKWQ S   KK PR  +L CS RIRAC SMAN K
Sbjct: 1    MVMA-TVGSEPA-CARTVHDVASSFSSKWQHSSTVKKQPRARILQCSLRIRACSSMANKK 58

Query: 1313 DIYKQVGLFSLRRKIEDAVLRAEMFASTALEMEEAMWTKQEEIVRDFDLWDDPAKSNDIL 1134
            DIYKQVGLFSL+RKIEDAVLRAE FASTALEMEEA W KQEE+VRDFD+WDDPAKSNDIL
Sbjct: 59   DIYKQVGLFSLKRKIEDAVLRAETFASTALEMEEATWIKQEEMVRDFDMWDDPAKSNDIL 118

Query: 1133 VKLANSAKAVASLKDVRYKVEEAKLINQLAEMNVIDYGLYKQAYDASLDVGNILDQYEMS 954
            VKLANSAK V SLKD++YKVEEAKLINQLAE+N IDYGLYKQAY+ SLDV  I+DQYE+S
Sbjct: 119  VKLANSAKVVDSLKDLKYKVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDQYEIS 178

Query: 953  KLLKGPFDMAGACLVIKAGSSGIYPKVWAEQLLSMYLRWAERQGYEGRIVDSCPFQNGGI 774
            KLLKGPFDMAGACLVIKAG  GIYPK+WAEQ+LSMYLRWA+R+GYEGRIVD CPF+NGGI
Sbjct: 179  KLLKGPFDMAGACLVIKAGPKGIYPKLWAEQILSMYLRWAKRRGYEGRIVDKCPFKNGGI 238

Query: 773  ISASVEFEFECAYGYLSGEKGVHHLIRGSPNESSQLETSSATVDVIPMFFENARDLEIDS 594
             SA +EFEFECAYGYLSGEKGVH+LIRGSPNESSQLE SSATVDVIPMF E+A DLEIDS
Sbjct: 239  NSAIIEFEFECAYGYLSGEKGVHYLIRGSPNESSQLEASSATVDVIPMFLESACDLEIDS 298

Query: 593  EDLIISSPLIHGEQKRQTEHTVCIQHLPTGISVQSSGERSHFANKMKAINRLKAKLQVIA 414
            EDLIISSPLIHG+ KRQT+HTVCIQH+PTGISVQS GERSHFANKMKA+NRLKAKL V  
Sbjct: 299  EDLIISSPLIHGKNKRQTDHTVCIQHIPTGISVQSYGERSHFANKMKALNRLKAKLLVTT 358

Query: 413  REQGVASINSIRKDDIVNLWQEETRR 336
            +EQGVASI SI+K++IVNLWQEE RR
Sbjct: 359  KEQGVASIKSIQKENIVNLWQEEIRR 384


>ref|XP_003589939.1| Peptide chain release factor [Medicago truncatula]
            gi|355478987|gb|AES60190.1| Peptide chain release factor
            [Medicago truncatula]
          Length = 538

 Score =  602 bits (1551), Expect = e-169
 Identities = 303/360 (84%), Positives = 327/360 (90%)
 Frame = -3

Query: 1295 GLFSLRRKIEDAVLRAEMFASTALEMEEAMWTKQEEIVRDFDLWDDPAKSNDILVKLANS 1116
            GLFSLRRKIED V+RAE++AS+ALEMEEA W KQEE+VRD DLWDDP KSNDILVKLANS
Sbjct: 179  GLFSLRRKIEDTVIRAELYASSALEMEEASWIKQEEMVRDSDLWDDPTKSNDILVKLANS 238

Query: 1115 AKAVASLKDVRYKVEEAKLINQLAEMNVIDYGLYKQAYDASLDVGNILDQYEMSKLLKGP 936
            AK V SLKD+RYKVEEAKLI QLAEMN IDYGLYKQAYDAS+DV NILDQYE+SKLLKGP
Sbjct: 239  AKVVDSLKDLRYKVEEAKLIKQLAEMNAIDYGLYKQAYDASVDVSNILDQYEISKLLKGP 298

Query: 935  FDMAGACLVIKAGSSGIYPKVWAEQLLSMYLRWAERQGYEGRIVDSCPFQNGGIISASVE 756
            FDMAGACLVIKA ++GI+ K+WAEQLL MYL WA+RQGYEGRIVD C  +NGGI SA++E
Sbjct: 299  FDMAGACLVIKA-ATGIFSKLWAEQLLQMYLGWAKRQGYEGRIVDRCLTENGGINSATIE 357

Query: 755  FEFECAYGYLSGEKGVHHLIRGSPNESSQLETSSATVDVIPMFFENARDLEIDSEDLIIS 576
            FEFECAYGYL GEKGVHHLIRGSPNESSQLETS+ATVDVIP+F E A DLEIDSEDLIIS
Sbjct: 358  FEFECAYGYLLGEKGVHHLIRGSPNESSQLETSTATVDVIPLFLEKALDLEIDSEDLIIS 417

Query: 575  SPLIHGEQKRQTEHTVCIQHLPTGISVQSSGERSHFANKMKAINRLKAKLQVIAREQGVA 396
            SPLIHGEQKRQT+  VCI H+PTGI+VQSSGERS FANKMKA+NRLKAKLQVIA EQGV 
Sbjct: 418  SPLIHGEQKRQTQRIVCIHHIPTGITVQSSGERSQFANKMKALNRLKAKLQVIAIEQGVG 477

Query: 395  SINSIRKDDIVNLWQEETRRYVSHPYKLVHDVKTGIETSDLNSVLDGNIGPLIAAHINTR 216
            SIN I KD IVNLW+E+TRRYVSHPYKLVHDVKT IE SDLNSVLDGNIGPLIAAHINTR
Sbjct: 478  SINGIVKDKIVNLWEEKTRRYVSHPYKLVHDVKTDIEMSDLNSVLDGNIGPLIAAHINTR 537



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = -3

Query: 1460 AACARTAYDVASSFSSKWQSSLVRKKNPRTGLLLCSSRIRACHSMA--NNKDIYKQVGLF 1287
            + CARTA+D+  S SSKW    +RKKNPR GL LCS R+RAC S A  NNKDIYKQVGLF
Sbjct: 5    SCCARTAHDIVPSVSSKW----LRKKNPRVGLFLCSFRVRACQSTANNNNKDIYKQVGLF 60


>ref|XP_003518157.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 385

 Score =  575 bits (1483), Expect = e-162
 Identities = 289/360 (80%), Positives = 320/360 (88%)
 Frame = -3

Query: 1295 GLFSLRRKIEDAVLRAEMFASTALEMEEAMWTKQEEIVRDFDLWDDPAKSNDILVKLANS 1116
            GLFSL+RKIEDAV RAE FA TALE          E+V DFD+W+DPAKSNDI+VKL NS
Sbjct: 33   GLFSLKRKIEDAVHRAENFALTALE----------EMVWDFDMWNDPAKSNDIIVKLENS 82

Query: 1115 AKAVASLKDVRYKVEEAKLINQLAEMNVIDYGLYKQAYDASLDVGNILDQYEMSKLLKGP 936
            AK V SL+D++YKVEEAKLINQLAE+NVIDYGLYKQAY+ SLDV  ILDQYE+SKLLKGP
Sbjct: 83   AKVVDSLRDLKYKVEEAKLINQLAEINVIDYGLYKQAYETSLDVSEILDQYEISKLLKGP 142

Query: 935  FDMAGACLVIKAGSSGIYPKVWAEQLLSMYLRWAERQGYEGRIVDSCPFQNGGIISASVE 756
            FDMAGACLVIKAG +GIY K+WAEQ+L MYLRWA+RQGY GRIVD C F+NGGI SA +E
Sbjct: 143  FDMAGACLVIKAGPNGIYSKLWAEQILIMYLRWAKRQGYAGRIVDKCLFKNGGINSAIIE 202

Query: 755  FEFECAYGYLSGEKGVHHLIRGSPNESSQLETSSATVDVIPMFFENARDLEIDSEDLIIS 576
            FEFECAYGYLSGEKGVH++IRGSPNESSQLE SSATVDVIPMF ENA DLEIDSEDLIIS
Sbjct: 203  FEFECAYGYLSGEKGVHYMIRGSPNESSQLEASSATVDVIPMFLENACDLEIDSEDLIIS 262

Query: 575  SPLIHGEQKRQTEHTVCIQHLPTGISVQSSGERSHFANKMKAINRLKAKLQVIAREQGVA 396
            SPLIHGE KRQT+HTVCIQH+PTGISVQSSGERS+FANKMKA+NRLKAKL V A+EQ VA
Sbjct: 263  SPLIHGENKRQTDHTVCIQHIPTGISVQSSGERSYFANKMKALNRLKAKLLVTAKEQRVA 322

Query: 395  SINSIRKDDIVNLWQEETRRYVSHPYKLVHDVKTGIETSDLNSVLDGNIGPLIAAHINTR 216
            SI SIRK++IVNLWQEE RRY+SHPYKLVHDVKTG+E  DLN+VL+GNIGPLI AHIN+R
Sbjct: 323  SIKSIRKENIVNLWQEEFRRYISHPYKLVHDVKTGVEVPDLNNVLEGNIGPLIVAHINSR 382


>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  483 bits (1243), Expect = e-134
 Identities = 243/402 (60%), Positives = 308/402 (76%)
 Frame = -3

Query: 1421 FSSKWQSSLVRKKNPRTGLLLCSSRIRACHSMANNKDIYKQVGLFSLRRKIEDAVLRAEM 1242
            FSSKWQ+S   K +         +++RA  SM +   ++K++GLFSLR+KIE  VL+A+M
Sbjct: 15   FSSKWQASRRDKLH---------TQVRASQSMDDKNKVFKELGLFSLRKKIEGVVLQADM 65

Query: 1241 FASTALEMEEAMWTKQEEIVRDFDLWDDPAKSNDILVKLANSAKAVASLKDVRYKVEEAK 1062
             A  ALE+EEA   +QEE++R ++LWDD  KSN+IL KLA+S+K V +LKD+ YK EEAK
Sbjct: 66   LAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAK 125

Query: 1061 LINQLAEMNVIDYGLYKQAYDASLDVGNILDQYEMSKLLKGPFDMAGACLVIKAGSSGIY 882
            LI QL EM+ I++GL++QAY+AS+DV   L QYEMSKLL+G FDM GACL IKAG  GIY
Sbjct: 126  LITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIY 185

Query: 881  PKVWAEQLLSMYLRWAERQGYEGRIVDSCPFQNGGIISASVEFEFECAYGYLSGEKGVHH 702
             ++WAEQLLSMY +WAE+QGY+GR+V+    +NGGI SA++EFE E  YGYLSGE+GVHH
Sbjct: 186  SEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHH 245

Query: 701  LIRGSPNESSQLETSSATVDVIPMFFENARDLEIDSEDLIISSPLIHGEQKRQTEHTVCI 522
            +IR S +ES   ET SA VDVIP+F E A DL+ID  DL ISSP  HG ++ +T H VCI
Sbjct: 246  MIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRISSPSCHGVEQGRTGHAVCI 305

Query: 521  QHLPTGISVQSSGERSHFANKMKAINRLKAKLQVIAREQGVASINSIRKDDIVNLWQEET 342
            QH+PTGISVQSSGERSHFANKM+A+NRLKAKL V A EQG+  +  I+++ I ++W++ET
Sbjct: 306  QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 365

Query: 341  RRYVSHPYKLVHDVKTGIETSDLNSVLDGNIGPLIAAHINTR 216
            RRYV HP KLV DVKT I+  DLNSVLDGNI PLI A+I+ R
Sbjct: 366  RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMR 407


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