BLASTX nr result

ID: Glycyrrhiza24_contig00003231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003231
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543421.1| PREDICTED: probable CCR4-associated factor 1...   451   e-124
ref|XP_003540260.1| PREDICTED: probable CCR4-associated factor 1...   449   e-124
gb|ACU19702.1| unknown [Glycine max]                                  447   e-123
ref|XP_003539842.1| PREDICTED: probable CCR4-associated factor 1...   432   e-119
ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119

>ref|XP_003543421.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like
           [Glycine max]
          Length = 312

 Score =  451 bits (1161), Expect = e-124
 Identities = 224/294 (76%), Positives = 253/294 (86%), Gaps = 1/294 (0%)
 Frame = -2

Query: 965 VIKKAAFRMGVAKEDPNSNSKPILIREVWASNLESEFELIRDVIDQYPIISMDTEFPGVI 786
           V+ +  F MGV  E+PNS SKPI+IREVWASNLESEFE+IR+VID YP ISMDTEFPGV+
Sbjct: 19  VLLQKRFEMGVIVENPNS-SKPIVIREVWASNLESEFEVIREVIDDYPFISMDTEFPGVV 77

Query: 785 YRPHV-DPTRPYLRRRLQPSDNYRLLKANVDALNLIQVGLTFSDANGNLPDLGTGNRFIW 609
           +RPHV DPT+PYL R L+PSD+YR LK NVDALNLIQVG+T SDA+GNLP L TGNRFIW
Sbjct: 78  FRPHVVDPTKPYLFR-LRPSDHYRFLKFNVDALNLIQVGITLSDADGNLPHLETGNRFIW 136

Query: 608 EFNFRDFNVERDPHALDSIELLRLQGIDFSRNAAEGVESRRFAELMMSSGLVCNDSVSWV 429
           EFNFRDF+++RD +A DSI+LLR QGIDF RN AEG++S  FAEL+MSSGLVCNDSVSWV
Sbjct: 137 EFNFRDFDIDRDDYASDSIDLLRRQGIDFRRNTAEGIDSNLFAELVMSSGLVCNDSVSWV 196

Query: 428 TFHSAYDFGYLVKILTRRSLPNGLGEFLRTLRVLFGKQVYDVKHMMRFCKGLYGGLNHVA 249
           TFHSAYDFGYLVKILTRR+LPNGL EFL+ LR  FG  VYD+KHMM+FC  LYGGL+ +A
Sbjct: 197 TFHSAYDFGYLVKILTRRNLPNGLEEFLKMLRAFFGNNVYDIKHMMQFCDTLYGGLDRLA 256

Query: 248 LTLNVDRAVGKCHQAGSDSLLTWHTFQKMRDVYFVNDNYGPQKLAGVLFGLEVT 87
            TLNVDRAVGKCHQAGSDSLLTWH FQKMRD+YFV D  GP K  GVLFGLE+T
Sbjct: 257 RTLNVDRAVGKCHQAGSDSLLTWHVFQKMRDIYFVKD--GPHKHVGVLFGLELT 308


>ref|XP_003540260.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like
           [Glycine max]
          Length = 309

 Score =  449 bits (1156), Expect = e-124
 Identities = 226/294 (76%), Positives = 252/294 (85%), Gaps = 1/294 (0%)
 Frame = -2

Query: 965 VIKKAAFRMGVAKEDPNSNSKPILIREVWASNLESEFELIRDVIDQYPIISMDTEFPGVI 786
           V+ +  F+MG+ +E+PN +SK ILIREVWASNLESEF+LIR VID YP ISMDTEFPGV+
Sbjct: 19  VLLQKRFQMGLLEENPN-HSKTILIREVWASNLESEFQLIRQVIDDYPFISMDTEFPGVV 77

Query: 785 YRPH-VDPTRPYLRRRLQPSDNYRLLKANVDALNLIQVGLTFSDANGNLPDLGTGNRFIW 609
           +RPH VDPT+PYL     PS +YR LK+NVDALNLIQ+GLT SD+NGNLP LGT NRFIW
Sbjct: 78  FRPHTVDPTKPYL----PPSVHYRFLKSNVDALNLIQIGLTLSDSNGNLPHLGTANRFIW 133

Query: 608 EFNFRDFNVERDPHALDSIELLRLQGIDFSRNAAEGVESRRFAELMMSSGLVCNDSVSWV 429
           EFNFRDF+VERD HA DSI+LLR QGIDF RNAAEGV+S  FAEL+MSSGLVCNDSVSWV
Sbjct: 134 EFNFRDFDVERDAHAPDSIDLLRRQGIDFRRNAAEGVDSYLFAELVMSSGLVCNDSVSWV 193

Query: 428 TFHSAYDFGYLVKILTRRSLPNGLGEFLRTLRVLFGKQVYDVKHMMRFCKGLYGGLNHVA 249
           TFHSAYDFGYLVKILTRRSLP+GL EFL  LR  FG  VYD+KHMMRFC  L+GGL+ +A
Sbjct: 194 TFHSAYDFGYLVKILTRRSLPSGLEEFLNMLRAFFGNNVYDIKHMMRFCDTLHGGLDRLA 253

Query: 248 LTLNVDRAVGKCHQAGSDSLLTWHTFQKMRDVYFVNDNYGPQKLAGVLFGLEVT 87
            TLNVDRAVGKCHQAGSDSLLTWH FQKMRD+YFV D  GPQK AGVLFGLE+T
Sbjct: 254 RTLNVDRAVGKCHQAGSDSLLTWHAFQKMRDIYFVTD--GPQKHAGVLFGLELT 305


>gb|ACU19702.1| unknown [Glycine max]
          Length = 309

 Score =  447 bits (1150), Expect = e-123
 Identities = 225/294 (76%), Positives = 252/294 (85%), Gaps = 1/294 (0%)
 Frame = -2

Query: 965 VIKKAAFRMGVAKEDPNSNSKPILIREVWASNLESEFELIRDVIDQYPIISMDTEFPGVI 786
           V+ +  F+MG+ +E+PN +SK ILIREVWASNLESEF+LIR VID YP+ISMDTEFPGV+
Sbjct: 19  VLLQKRFQMGLLEENPN-HSKTILIREVWASNLESEFQLIRQVIDDYPLISMDTEFPGVV 77

Query: 785 YRPH-VDPTRPYLRRRLQPSDNYRLLKANVDALNLIQVGLTFSDANGNLPDLGTGNRFIW 609
           +RPH VDPT+PYL     PS +YR LK+NVDALNLIQ+GLT SD+NGNLP LGT NRFIW
Sbjct: 78  FRPHTVDPTKPYL----PPSVHYRFLKSNVDALNLIQIGLTLSDSNGNLPHLGTANRFIW 133

Query: 608 EFNFRDFNVERDPHALDSIELLRLQGIDFSRNAAEGVESRRFAELMMSSGLVCNDSVSWV 429
           EFNFRDF+VERD HA DSI+LLR QGIDF RNAAEGV+S  FAEL+MSSGLVCNDSVSWV
Sbjct: 134 EFNFRDFDVERDAHAPDSIDLLRRQGIDFRRNAAEGVDSYLFAELVMSSGLVCNDSVSWV 193

Query: 428 TFHSAYDFGYLVKILTRRSLPNGLGEFLRTLRVLFGKQVYDVKHMMRFCKGLYGGLNHVA 249
           TFHSAYDFGYLVKILTRRSLP+GL EFL  LR  FG  VYD+KHMMR C  L+GGL+ +A
Sbjct: 194 TFHSAYDFGYLVKILTRRSLPSGLEEFLNMLRAFFGNNVYDIKHMMRSCDTLHGGLDRLA 253

Query: 248 LTLNVDRAVGKCHQAGSDSLLTWHTFQKMRDVYFVNDNYGPQKLAGVLFGLEVT 87
            TLNVDRAVGKCHQAGSDSLLTWH FQKMRD+YFV D  GPQK AGVLFGLE+T
Sbjct: 254 RTLNVDRAVGKCHQAGSDSLLTWHAFQKMRDIYFVTD--GPQKHAGVLFGLELT 305


>ref|XP_003539842.1| PREDICTED: probable CCR4-associated factor 1 homolog 9-like
           [Glycine max]
          Length = 278

 Score =  432 bits (1110), Expect = e-119
 Identities = 215/282 (76%), Positives = 243/282 (86%)
 Frame = -2

Query: 941 MGVAKEDPNSNSKPILIREVWASNLESEFELIRDVIDQYPIISMDTEFPGVIYRPHVDPT 762
           MGV  EDPN N  PI+IREVWASNLESEFELIR++ID+YP ISMDTEFPGVI+RPHVDPT
Sbjct: 1   MGVFSEDPNPNPNPIVIREVWASNLESEFELIRELIDRYPFISMDTEFPGVIFRPHVDPT 60

Query: 761 RPYLRRRLQPSDNYRLLKANVDALNLIQVGLTFSDANGNLPDLGTGNRFIWEFNFRDFNV 582
           +P+  R  +PSD+YRLLK+NVDALNLIQVGLT +DA GNLPDL  GNR IWEFNFRDF+V
Sbjct: 61  KPFNHRN-RPSDHYRLLKSNVDALNLIQVGLTLTDAAGNLPDLA-GNRSIWEFNFRDFDV 118

Query: 581 ERDPHALDSIELLRLQGIDFSRNAAEGVESRRFAELMMSSGLVCNDSVSWVTFHSAYDFG 402
            RD +A DSI+LLR QGIDF+RN A+GV+S  FAELMMSSGLVCND+VSWVTFHSAYDFG
Sbjct: 119 ARDAYAPDSIDLLRRQGIDFARNTADGVDSTCFAELMMSSGLVCNDAVSWVTFHSAYDFG 178

Query: 401 YLVKILTRRSLPNGLGEFLRTLRVLFGKQVYDVKHMMRFCKGLYGGLNHVALTLNVDRAV 222
           YLVKILTRR+LP  L EFL+T++V FG  VYDVKHMMRFC  LYGGL+ VA TLNVDRAV
Sbjct: 179 YLVKILTRRNLPTRLEEFLKTVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAV 238

Query: 221 GKCHQAGSDSLLTWHTFQKMRDVYFVNDNYGPQKLAGVLFGL 96
           GKCHQAGSDSLLTWH FQK+ D+YFV + +  +K AGVLFGL
Sbjct: 239 GKCHQAGSDSLLTWHAFQKIVDIYFVKEEH--RKHAGVLFGL 278


>ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|222837629|gb|EEE75994.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  432 bits (1110), Expect = e-119
 Identities = 215/275 (78%), Positives = 239/275 (86%), Gaps = 2/275 (0%)
 Frame = -2

Query: 908 SKPILIREVWASNLESEFELIRDVIDQYPIISMDTEFPGVIYRPHVDPT--RPYLRRRLQ 735
           SK I+IREVW+ NLESEFELIRD+ID++P ISMDTEFPGV++RP VDPT  R Y R+ L+
Sbjct: 4   SKEIVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFRQ-LK 62

Query: 734 PSDNYRLLKANVDALNLIQVGLTFSDANGNLPDLGTGNRFIWEFNFRDFNVERDPHALDS 555
           PSD+Y++LK+NVDALNLIQVGLT SDA GNLPDLGTGNRFIWEFNFRDF+VERD HA DS
Sbjct: 63  PSDHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDFDVERDSHAPDS 122

Query: 554 IELLRLQGIDFSRNAAEGVESRRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRR 375
           IELLR QGIDF RN  EGV+S RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTRR
Sbjct: 123 IELLRRQGIDFERNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRR 182

Query: 374 SLPNGLGEFLRTLRVLFGKQVYDVKHMMRFCKGLYGGLNHVALTLNVDRAVGKCHQAGSD 195
            LP+GL  FL  LRV FG  +YDVKHMMRFCK LYGGL+ VA TL V+R VGKCHQAGSD
Sbjct: 183 ELPSGLVGFLSLLRVFFGNNIYDVKHMMRFCKSLYGGLDRVARTLEVNREVGKCHQAGSD 242

Query: 194 SLLTWHTFQKMRDVYFVNDNYGPQKLAGVLFGLEV 90
           SLLTWH FQKMRDV+FV D  GP++ AGVL+GLEV
Sbjct: 243 SLLTWHAFQKMRDVFFVKD--GPEQHAGVLYGLEV 275


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