BLASTX nr result

ID: Glycyrrhiza24_contig00003225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003225
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608452.1| Polyadenylate-binding protein [Medicago trun...   336   5e-90
gb|AFK37484.1| unknown [Lotus japonicus]                              334   2e-89
gb|AFK38116.1| unknown [Medicago truncatula]                          334   2e-89
ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycin...   322   1e-85
ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycin...   320   2e-85

>ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355509507|gb|AES90649.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 199

 Score =  336 bits (861), Expect = 5e-90
 Identities = 169/199 (84%), Positives = 181/199 (90%), Gaps = 3/199 (1%)
 Frame = -2

Query: 936 MENDDVEMLGADNNEAELDDMKKRLKEMEDEAAALRDMQAKVEKEMGSVQDPANAAASQT 757
           MENDDV+M+GADNNEA+LDDMKKRLKEMEDEAAAL++MQAKVEKEMGSVQDPANA+ASQ 
Sbjct: 1   MENDDVDMIGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSVQDPANASASQI 60

Query: 756 NREEVDSRSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 577
           NREEVD+RSIFVGNVDY+CTPE+VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF+EVEA
Sbjct: 61  NREEVDARSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEA 120

Query: 576 VQEALSLNESELHGRQLKVTAKRTNVPGMKQYRPRRP-NPYMGFRGRT--XXXXXXXXXX 406
           VQEAL LNESELHGRQLKVTAKRTNVPGMKQ+RPRRP NPYMGFRGRT            
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAP 180

Query: 405 XXXGKVPRFRMGMRYSPYY 349
              GK+PRFRMGMRYSPYY
Sbjct: 181 YGYGKIPRFRMGMRYSPYY 199


>gb|AFK37484.1| unknown [Lotus japonicus]
          Length = 200

 Score =  334 bits (857), Expect = 2e-89
 Identities = 170/200 (85%), Positives = 179/200 (89%), Gaps = 4/200 (2%)
 Frame = -2

Query: 936 MENDDVEMLGADNN---EAELDDMKKRLKEMEDEAAALRDMQAKVEKEMGSVQDPANAAA 766
           MENDDV+M+GA+NN   EAELDDMKKRLKEMEDEAAALR+MQAKVEKEMGSV DPANA+A
Sbjct: 1   MENDDVDMVGAENNNNNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVPDPANASA 60

Query: 765 SQTNREEVDSRSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLE 586
           SQTNREEVDSRS+FVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLE
Sbjct: 61  SQTNREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLE 120

Query: 585 VEAVQEALSLNESELHGRQLKVTAKRTNVPGMKQYRPRRPNPYMGFRGRT-XXXXXXXXX 409
           VEAVQEAL+LNESELHGRQLKV+ KRTNVPGMKQ+RPR PNPYMGFRGR           
Sbjct: 121 VEAVQEALALNESELHGRQLKVSGKRTNVPGMKQFRPRAPNPYMGFRGRALFAPPPFAFA 180

Query: 408 XXXXGKVPRFRMGMRYSPYY 349
               GKVPRFRMGMRYSPYY
Sbjct: 181 PYGYGKVPRFRMGMRYSPYY 200


>gb|AFK38116.1| unknown [Medicago truncatula]
          Length = 199

 Score =  334 bits (856), Expect = 2e-89
 Identities = 167/199 (83%), Positives = 180/199 (90%), Gaps = 3/199 (1%)
 Frame = -2

Query: 936 MENDDVEMLGADNNEAELDDMKKRLKEMEDEAAALRDMQAKVEKEMGSVQDPANAAASQT 757
           MENDDV+M+GADNNEA+LDDMKKRLKEMEDEAAAL++MQAKVEKEMGS+QDPANA+ASQ 
Sbjct: 1   MENDDVDMIGADNNEADLDDMKKRLKEMEDEAAALKEMQAKVEKEMGSIQDPANASASQI 60

Query: 756 NREEVDSRSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 577
           NREEVD+RSIFVGNVDY+CTPE+VQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEF+EVEA
Sbjct: 61  NREEVDARSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEA 120

Query: 576 VQEALSLNESELHGRQLKVTAKRTNVPGMKQYRPRRP-NPYMGFRGRT--XXXXXXXXXX 406
            QEAL LNESELHGRQLKVTAKRTNVPGMKQ+RPRRP NPYMGFRGRT            
Sbjct: 121 AQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPSNPYMGFRGRTPYAPPFAYAPAP 180

Query: 405 XXXGKVPRFRMGMRYSPYY 349
              GK+PRFRMGMRYSPYY
Sbjct: 181 YGYGKIPRFRMGMRYSPYY 199


>ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
           gi|255647673|gb|ACU24298.1| unknown [Glycine max]
          Length = 197

 Score =  322 bits (824), Expect = 1e-85
 Identities = 166/198 (83%), Positives = 174/198 (87%), Gaps = 2/198 (1%)
 Frame = -2

Query: 936 MENDDVEMLGADNNEAELDDMKKRLKEMEDEAAALRDMQAKVEKEMGSVQDPANAAASQT 757
           MENDDV+M  AD +E ELDDMKKRLKEMEDEAAALR+MQAKVEKEMGS QDPANA+ASQ 
Sbjct: 1   MENDDVDMHAADTSE-ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQA 59

Query: 756 NREEVDSRSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 577
           N+EE+DSRS+FVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA
Sbjct: 60  NKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 119

Query: 576 VQEALSLNESELHGRQLKVTAKRTNVPGMKQYRPRRP-NPYM-GFRGRTXXXXXXXXXXX 403
           VQEAL LNESELHGRQLKVTAKRTN+PGMKQYRPRR  NPYM GFRGRT           
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRTINPYMGGFRGRTPYAPPFIYSPY 179

Query: 402 XXGKVPRFRMGMRYSPYY 349
             GKVPRFRM MRYSPYY
Sbjct: 180 GYGKVPRFRMAMRYSPYY 197


>ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
           gi|255635956|gb|ACU18324.1| unknown [Glycine max]
          Length = 197

 Score =  320 bits (821), Expect = 2e-85
 Identities = 165/198 (83%), Positives = 174/198 (87%), Gaps = 2/198 (1%)
 Frame = -2

Query: 936 MENDDVEMLGADNNEAELDDMKKRLKEMEDEAAALRDMQAKVEKEMGSVQDPANAAASQT 757
           MENDDV+M  AD NE ELDDMKKRLKEMEDEAAALR+MQAKVEKEMGSVQDPANA+ASQ 
Sbjct: 1   MENDDVDMHAADTNE-ELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANASASQA 59

Query: 756 NREEVDSRSIFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEA 577
           N+EE+DSRS+FVGNVDYSCTPEEVQQHFQSCGTVNR+TIRTDKFGQPKGYAYVEFLEVEA
Sbjct: 60  NKEEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEA 119

Query: 576 VQEALSLNESELHGRQLKVTAKRTNVPGMKQYRPRR-PNPYM-GFRGRTXXXXXXXXXXX 403
           VQEAL LNESELHGRQLKVTAKRTN+PGMKQYRPRR  NPYM G RGRT           
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSTNPYMGGLRGRTPYAAPFIYSPY 179

Query: 402 XXGKVPRFRMGMRYSPYY 349
             GKVPRFRM MR+SPYY
Sbjct: 180 GYGKVPRFRMAMRHSPYY 197


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