BLASTX nr result

ID: Glycyrrhiza24_contig00003205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003205
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]       328   9e-88
gb|AFK38884.1| unknown [Lotus japonicus]                              327   3e-87
ref|XP_003621615.1| Protein YIF1B-B [Medicago truncatula] gi|355...   327   3e-87
gb|AFK45302.1| unknown [Medicago truncatula]                          323   4e-86
ref|XP_003552633.1| PREDICTED: protein YIF1B-like [Glycine max]       322   1e-85

>ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]
          Length = 273

 Score =  328 bits (842), Expect = 9e-88
 Identities = 158/176 (89%), Positives = 164/176 (93%)
 Frame = -2

Query: 957 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 778
           TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK
Sbjct: 98  TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 157

Query: 777 GLVGWFVQTTVLKMTLFSLGSGEAPLLDIIAYAGYTFPGLCLAVLGRIVGGYSYYIVMPW 598
           GLVGWF+QT +LK+TL SLGSGEAPLLDIIAYAGYTFPGLCLAV GRI+  YSYY +M W
Sbjct: 158 GLVGWFMQTALLKVTLLSLGSGEAPLLDIIAYAGYTFPGLCLAVSGRIIWSYSYYFLMLW 217

Query: 597 TCLCMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALVQIPLFIWLGNITVNWFI 430
           TCLCMAV+LVKTMKRVLFAEVRSYDSSKHHYLLL IAL Q PLF WLGNITVNW I
Sbjct: 218 TCLCMAVYLVKTMKRVLFAEVRSYDSSKHHYLLLLIALAQFPLFTWLGNITVNWLI 273


>gb|AFK38884.1| unknown [Lotus japonicus]
          Length = 269

 Score =  327 bits (837), Expect = 3e-87
 Identities = 156/176 (88%), Positives = 166/176 (94%)
 Frame = -2

Query: 957 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 778
           TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAG+SLGL GKFSPEALN LFIK
Sbjct: 94  TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIK 153

Query: 777 GLVGWFVQTTVLKMTLFSLGSGEAPLLDIIAYAGYTFPGLCLAVLGRIVGGYSYYIVMPW 598
           GL+GWF+Q ++LKMTL SLGSGEAPLLDIIAYAGYTF G+CLAVLGRI+ GYSYY +MPW
Sbjct: 154 GLLGWFMQASLLKMTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPW 213

Query: 597 TCLCMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALVQIPLFIWLGNITVNWFI 430
           TCLCMAVFLVKTMKRVLFAEVR+YDSSKHHYLLLFIALVQ PLF WLGNITVNW +
Sbjct: 214 TCLCMAVFLVKTMKRVLFAEVRTYDSSKHHYLLLFIALVQFPLFTWLGNITVNWLL 269


>ref|XP_003621615.1| Protein YIF1B-B [Medicago truncatula] gi|355496630|gb|AES77833.1|
           Protein YIF1B-B [Medicago truncatula]
          Length = 382

 Score =  327 bits (837), Expect = 3e-87
 Identities = 153/176 (86%), Positives = 165/176 (93%)
 Frame = -2

Query: 957 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 778
           TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK
Sbjct: 207 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 266

Query: 777 GLVGWFVQTTVLKMTLFSLGSGEAPLLDIIAYAGYTFPGLCLAVLGRIVGGYSYYIVMPW 598
           G+VGW +QT +LK+TL SLGSGEAPLLDI+AYAGYTF G+ LA LG+I+ GYSYY++MPW
Sbjct: 267 GMVGWCMQTALLKLTLLSLGSGEAPLLDIVAYAGYTFAGMSLAALGKIISGYSYYVLMPW 326

Query: 597 TCLCMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALVQIPLFIWLGNITVNWFI 430
            CLCM +FLVKTMKRVLFAEVRSYDSSKHHYLLLFIAL Q PLF+WLGNITVNWFI
Sbjct: 327 FCLCMGIFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFMWLGNITVNWFI 382


>gb|AFK45302.1| unknown [Medicago truncatula]
          Length = 273

 Score =  323 bits (828), Expect = 4e-86
 Identities = 152/176 (86%), Positives = 164/176 (93%)
 Frame = -2

Query: 957 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 778
           TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK
Sbjct: 98  TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 157

Query: 777 GLVGWFVQTTVLKMTLFSLGSGEAPLLDIIAYAGYTFPGLCLAVLGRIVGGYSYYIVMPW 598
           G+VGW +QT +LK+TL SLGSGEAPLLDI+AYAGYTF G+ LA LG+I+ GYS+Y +MPW
Sbjct: 158 GMVGWCMQTALLKLTLLSLGSGEAPLLDIVAYAGYTFAGMSLAALGKIISGYSHYALMPW 217

Query: 597 TCLCMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALVQIPLFIWLGNITVNWFI 430
            CLCM +FLVKTMKRVLFAEVRSYDSSKHHYLLLFIAL Q PLF+WLGNITVNWFI
Sbjct: 218 FCLCMGIFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFMWLGNITVNWFI 273


>ref|XP_003552633.1| PREDICTED: protein YIF1B-like [Glycine max]
          Length = 273

 Score =  322 bits (824), Expect = 1e-85
 Identities = 155/176 (88%), Positives = 162/176 (92%)
 Frame = -2

Query: 957 TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIK 778
           TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRG FSPEALNWLFIK
Sbjct: 98  TRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVVLAGISLGLRGMFSPEALNWLFIK 157

Query: 777 GLVGWFVQTTVLKMTLFSLGSGEAPLLDIIAYAGYTFPGLCLAVLGRIVGGYSYYIVMPW 598
           GLVGWF+QT +LK+TL SLGSGEAPLLDIIA AGYTF GLCLAV GR++  YSYY +M W
Sbjct: 158 GLVGWFMQTALLKVTLLSLGSGEAPLLDIIANAGYTFAGLCLAVCGRMIWSYSYYFLMLW 217

Query: 597 TCLCMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALVQIPLFIWLGNITVNWFI 430
           TC+CMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIAL Q PLF WLGNITVNW I
Sbjct: 218 TCICMAVFLVKTMKRVLFAEVRSYDSSKHHYLLLFIALAQFPLFTWLGNITVNWLI 273


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