BLASTX nr result

ID: Glycyrrhiza24_contig00003181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003181
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glyc...   212   4e-53
ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like ...   212   5e-53
ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like ...   210   2e-52
gb|AFK38454.1| unknown [Lotus japonicus]                              208   7e-52
ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isofo...   206   2e-51

>ref|XP_003555154.1| PREDICTED: 60S ribosomal protein L36-3 [Glycine max]
          Length = 110

 Score =  212 bits (540), Expect = 4e-53
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = -2

Query: 534 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 355
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKHPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 354 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 214
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 107


>ref|XP_003536462.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
          Length = 110

 Score =  212 bits (539), Expect = 5e-53
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = -2

Query: 534 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 355
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 354 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 214
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 107


>ref|XP_003556111.1| PREDICTED: 60S ribosomal protein L36-3-like [Glycine max]
           gi|356575978|ref|XP_003556112.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 1 [Glycine max]
           gi|356575980|ref|XP_003556113.1| PREDICTED: 60S
           ribosomal protein L36-3-like isoform 2 [Glycine max]
           gi|255645551|gb|ACU23270.1| unknown [Glycine max]
          Length = 110

 Score =  210 bits (534), Expect = 2e-52
 Identities = 105/107 (98%), Positives = 106/107 (99%)
 Frame = -2

Query: 534 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 355
           MAPK PSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 354 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 214
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMRAGGAGD
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGAGD 107


>gb|AFK38454.1| unknown [Lotus japonicus]
          Length = 110

 Score =  208 bits (529), Expect = 7e-52
 Identities = 104/107 (97%), Positives = 106/107 (99%)
 Frame = -2

Query: 534 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 355
           MAPKQPSTGLFVGLNKGHVVTKKEL PRPSDRKGKTSKRVHFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRI 60

Query: 354 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 214
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMRAGGAGD
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGD 107


>ref|XP_002268801.1| PREDICTED: 60S ribosomal protein L36-3 isoform 2 [Vitis vinifera]
           gi|225464489|ref|XP_002268754.1| PREDICTED: 60S
           ribosomal protein L36-3 isoform 1 [Vitis vinifera]
           gi|302143845|emb|CBI22706.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  206 bits (525), Expect = 2e-51
 Identities = 101/107 (94%), Positives = 106/107 (99%)
 Frame = -2

Query: 534 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 355
           MAPKQP+TGLFVGLNKGH+VTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRI 60

Query: 354 TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGD 214
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR+GG G+
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGE 107


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