BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003179
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]         699   0.0  
gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycin...   699   0.0  
ref|NP_084778.1| photosystem II protein D1 [Lotus japonicus] gi|...   691   0.0  
ref|YP_002149715.1| photosystem II protein D1 [Cicer arietinum] ...   690   0.0  
gb|AFU95387.1| PsbA, partial (chloroplast) [Byrsonima crassifolia]    689   0.0  

>gb|ABH88068.1| photosystem II protein D1 [Phaseolus vulgaris]
          Length = 359

 Score =  699 bits (1804), Expect = 0.0
 Identities = 341/359 (94%), Positives = 345/359 (96%)
 Frame = +2

Query: 137  INQDFTMTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 316
            +NQDFTMTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1    MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60

Query: 317  APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 496
            APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61   APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120

Query: 497  IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPL 676
            IVLHFLLGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPL
Sbjct: 121  IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180

Query: 677  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 856
            GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240

Query: 857  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 1036
            EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA
Sbjct: 241  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 300

Query: 1037 FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 1213
            FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS+NG
Sbjct: 301  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 359


>gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycine max]
          Length = 359

 Score =  699 bits (1804), Expect = 0.0
 Identities = 341/359 (94%), Positives = 345/359 (96%)
 Frame = +2

Query: 137  INQDFTMTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 316
            +NQDFTMTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA
Sbjct: 1    MNQDFTMTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIA 60

Query: 317  APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 496
            APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL
Sbjct: 61   APPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEL 120

Query: 497  IVLHFLLGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPL 676
            IVLHFLLGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPL
Sbjct: 121  IVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPL 180

Query: 677  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 856
            GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN
Sbjct: 181  GISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN 240

Query: 857  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 1036
            EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA
Sbjct: 241  EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 300

Query: 1037 FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 1213
            FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA++APSING
Sbjct: 301  FNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 359


>ref|NP_084778.1| photosystem II protein D1 [Lotus japonicus]
            gi|23821997|sp|Q9BBU3.1|PSBA_LOTJA RecName:
            Full=Photosystem Q(B) protein; AltName: Full=32 kDa
            thylakoid membrane protein; AltName: Full=Photosystem II
            protein D1; Flags: Precursor gi|13358959|dbj|BAB33176.1|
            PSII 32 KDa protein [Lotus japonicus]
          Length = 353

 Score =  691 bits (1784), Expect = 0.0
 Identities = 339/353 (96%), Positives = 339/353 (96%)
 Frame = +2

Query: 155  MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 334
            MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 335  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 514
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 515  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 694
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 695  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 874
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 875  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1054
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1055 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 1213
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353


>ref|YP_002149715.1| photosystem II protein D1 [Cicer arietinum]
            gi|219673953|ref|YP_002456437.1| photosystem II protein
            D1 [Trifolium subterraneum]
            gi|295136976|ref|YP_003587522.1| photosystem II protein
            D1 [Pisum sativum] gi|131252|sp|P06585.3|PSBA_PEA
            RecName: Full=Photosystem Q(B) protein; AltName: Full=32
            kDa thylakoid membrane protein; AltName: Full=Photosystem
            II protein D1; Flags: Precursor gi|343032|gb|AAA84547.1|
            34.5 Kd protein [Pisum sativum]
            gi|193788922|gb|ACF20518.1| photosystem II protein D1
            [Trifolium subterraneum] gi|197089782|gb|ACH41052.1|
            photosystem II protein D1 [Cicer arietinum]
            gi|293338548|gb|ADE43521.1| photosystem II protein D1
            (chloroplast) [Pisum sativum]
          Length = 353

 Score =  690 bits (1781), Expect = 0.0
 Identities = 338/353 (95%), Positives = 339/353 (96%)
 Frame = +2

Query: 155  MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 334
            MTAILERR+SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 335  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 514
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 515  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 694
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 695  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 874
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 875  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1054
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1055 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 1213
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353


>gb|AFU95387.1| PsbA, partial (chloroplast) [Byrsonima crassifolia]
          Length = 353

 Score =  689 bits (1779), Expect = 0.0
 Identities = 338/353 (95%), Positives = 339/353 (96%)
 Frame = +2

Query: 155  MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 334
            MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1    MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60

Query: 335  DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 514
            DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61   DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120

Query: 515  LGVACYMGREWELSFRLGMRPWIXXXXXXXXXXXXXXFLIYPIGQGSFSDGMPLGISGTF 694
            LGVACYMGREWELSFRLGMRPWI              FLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121  LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180

Query: 695  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 874
            NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181  NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240

Query: 875  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 1054
            QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300

Query: 1055 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 1213
            NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301  NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353