BLASTX nr result

ID: Glycyrrhiza24_contig00003171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003171
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago trun...   169   1e-39
gb|AFK46395.1| unknown [Lotus japonicus]                              166   7e-39
gb|ACU18771.1| unknown [Glycine max]                                  164   4e-38
ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycin...   162   1e-37
ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati...   157   6e-36

>ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago truncatula]
           gi|355513595|gb|AES95218.1| Scaffold attachment factor
           B1 [Medicago truncatula]
          Length = 303

 Score =  169 bits (428), Expect = 1e-39
 Identities = 85/104 (81%), Positives = 88/104 (84%)
 Frame = -3

Query: 828 RTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSV 649
           R+ DRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD+ 
Sbjct: 123 RSPDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTA 182

Query: 648 EDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXPGHYLGLKNT 517
           EDANRCIKYLNQS+LEGRYI              PGHYLGLKNT
Sbjct: 183 EDANRCIKYLNQSILEGRYITVERSKRKRPRTPTPGHYLGLKNT 226


>gb|AFK46395.1| unknown [Lotus japonicus]
          Length = 268

 Score =  166 bits (421), Expect = 7e-39
 Identities = 97/184 (52%), Positives = 103/184 (55%)
 Frame = -3

Query: 822 EDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSVED 643
           EDRNGG+TLYVTGLSSRVTERDLEEHF+KEGKVASCFLVVEPRTRISRGFAF+TMD+VED
Sbjct: 85  EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVED 144

Query: 642 ANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXPGHYLGLKNTXXXXXXXXXXXXXXXXXX 463
           ANRC+KYLNQSVLEGRYI              PGHYLGLK+T                  
Sbjct: 145 ANRCVKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDRDYGHRGGDRGRYRGG 204

Query: 462 XXXXXXXXXXXXXXXXXXXXXXXXXXXSPRHXXXXXXXXXXXXXXXXXXXXYGSPDRRYA 283
                                      SPR                     Y SPDRRYA
Sbjct: 205 GGGGSGRDDYQHRRSPRRSPYRGGRDYSPRRSSPYAGSSRRERSRSLPYSPYASPDRRYA 264

Query: 282 RGSR 271
           RGSR
Sbjct: 265 RGSR 268


>gb|ACU18771.1| unknown [Glycine max]
          Length = 246

 Score =  164 bits (415), Expect = 4e-38
 Identities = 83/106 (78%), Positives = 89/106 (83%)
 Frame = -3

Query: 834 HERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 655
           +ER+E +N G TLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF+TMD
Sbjct: 59  NERSEAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMD 118

Query: 654 SVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXPGHYLGLKNT 517
           +VEDANRCIKYLNQSVLEGRYI              PGHYLGLK+T
Sbjct: 119 TVEDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKST 164


>ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycine max]
           gi|255629542|gb|ACU15118.1| unknown [Glycine max]
          Length = 238

 Score =  162 bits (410), Expect = 1e-37
 Identities = 83/106 (78%), Positives = 86/106 (81%)
 Frame = -3

Query: 834 HERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 655
           H R+E  N GDTLYVTGLSSRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTM+
Sbjct: 61  HGRSEPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTME 120

Query: 654 SVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXPGHYLGLKNT 517
           S EDA RCIKYLNQSVLEGRYI              PGHYLGLKNT
Sbjct: 121 SAEDAERCIKYLNQSVLEGRYITIERSRRKRARTPTPGHYLGLKNT 166


>ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223529816|gb|EEF31751.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 248

 Score =  157 bits (396), Expect = 6e-36
 Identities = 80/105 (76%), Positives = 86/105 (81%)
 Frame = -3

Query: 834 HERTEDRNGGDTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMD 655
           H RTE  N G+TLYVTGLS+RVTER LEEHF+KEGKVASCFLVVEPRTRISRGFAFVTMD
Sbjct: 64  HGRTEAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMD 123

Query: 654 SVEDANRCIKYLNQSVLEGRYIXXXXXXXXXXXXXXPGHYLGLKN 520
           +VEDANRC+KYLNQSVLEGRYI              PGHYLGLK+
Sbjct: 124 NVEDANRCVKYLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKS 168


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