BLASTX nr result

ID: Glycyrrhiza24_contig00003165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003165
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636173.1| Elongator complex protein [Medicago truncatu...   561   e-157
ref|NP_001241905.1| uncharacterized protein LOC100799237 [Glycin...   505   e-149
ref|XP_003521057.1| PREDICTED: elongator complex protein 4-like ...   489   e-142
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   499   e-139
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              495   e-137

>ref|XP_003636173.1| Elongator complex protein [Medicago truncatula]
            gi|355502108|gb|AES83311.1| Elongator complex protein
            [Medicago truncatula]
          Length = 349

 Score =  561 bits (1446), Expect = e-157
 Identities = 287/344 (83%), Positives = 305/344 (88%)
 Frame = -2

Query: 1287 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1108
            QNSG+KHGPNGT FLSSGIPDLDKILGGGFSLGSLVM+MEDAEAPHHMLLLRN MSQGLV
Sbjct: 21   QNSGLKHGPNGTTFLSSGIPDLDKILGGGFSLGSLVMIMEDAEAPHHMLLLRNLMSQGLV 80

Query: 1107 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHEKDLRIAWQYKKYFGDPQLN 928
            HKQPLLYASAS RDPKGFLGTLPAP  +KEDK  ++DL +EKDLRIAWQYKKYFG     
Sbjct: 81   HKQPLLYASAS-RDPKGFLGTLPAPAPAKEDK--SQDLTNEKDLRIAWQYKKYFG----- 132

Query: 927  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 748
                   AQ DYCN+FDLRKPLDR F+SGMNVDCVSIQDSPNLA+LQD+CA FL+QFSR+
Sbjct: 133  -------AQHDYCNEFDLRKPLDRHFYSGMNVDCVSIQDSPNLASLQDQCAKFLSQFSRS 185

Query: 747  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 568
            E++ISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSL+SPSC
Sbjct: 186  EANISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLVSPSC 245

Query: 567  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFS 388
            SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLN+HKVARLNTQVPVILEATTFS
Sbjct: 246  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNIHKVARLNTQVPVILEATTFS 305

Query: 387  IKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 256
            IKLQKRR+LVLECLNQAP+D               STKAG LDF
Sbjct: 306  IKLQKRRYLVLECLNQAPVDGSSGSSYNTSGSCSGSTKAGSLDF 349


>ref|NP_001241905.1| uncharacterized protein LOC100799237 [Glycine max]
            gi|255641986|gb|ACU21260.1| unknown [Glycine max]
          Length = 335

 Score =  505 bits (1300), Expect(2) = e-149
 Identities = 251/288 (87%), Positives = 266/288 (92%)
 Frame = -2

Query: 1287 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1108
            QN G+KHGPNGTMF+SSGIPDLDKILGGGFSLGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 21   QNHGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDPEAPHHMLLLRNFMSQGLV 80

Query: 1107 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHEKDLRIAWQYKKYFGDPQLN 928
             KQPLLYASAS RDPK FLGTLP+P S K D +K+ DL HEKDLRIAWQYKKYFG+PQLN
Sbjct: 81   QKQPLLYASAS-RDPKSFLGTLPSPASPKGD-NKSSDLSHEKDLRIAWQYKKYFGEPQLN 138

Query: 927  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 748
            +N+NN G Q DYCNDFDLRKPLDR FFSG NVDCVSI+DSPNL ALQD CAGFLA+FSRN
Sbjct: 139  LNTNNGG-QHDYCNDFDLRKPLDRHFFSGNNVDCVSIKDSPNLTALQDCCAGFLAKFSRN 197

Query: 747  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 568
            E SISSAGRIAIQSFCSPQCKY+N EWHMLSFIRSLK MARSSNAV+VVTFPPSLL PSC
Sbjct: 198  EGSISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKSMARSSNAVIVVTFPPSLLPPSC 257

Query: 567  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNT 424
            SKRLQHMADTLLSV+AIPDEDKE+AKLLTGYQDM+GLLNVHKVARLNT
Sbjct: 258  SKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMIGLLNVHKVARLNT 305



 Score = 51.6 bits (122), Expect(2) = e-149
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -1

Query: 424 TGTCDS*GHNILNKIAKT*IFGSRMSKSSP 335
           TG+CDS GHNIL+KIAKT +FG RMSKSSP
Sbjct: 305 TGSCDSGGHNILHKIAKTKVFGFRMSKSSP 334


>ref|XP_003521057.1| PREDICTED: elongator complex protein 4-like [Glycine max]
          Length = 334

 Score =  489 bits (1260), Expect(2) = e-142
 Identities = 244/287 (85%), Positives = 262/287 (91%)
 Frame = -2

Query: 1287 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1108
            QN G+KHGPNGTMF+SSGIPDLDKILGGGFSLGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 21   QNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDPEAPHHMLLLRNFMSQGLV 80

Query: 1107 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHEKDLRIAWQYKKYFGDPQLN 928
             KQPLLYASAS RDPK FLGTLP+  S K DK    DLG EKDLRIAWQYKKYFG+PQLN
Sbjct: 81   QKQPLLYASAS-RDPKSFLGTLPSLVSPKGDKSS--DLGQEKDLRIAWQYKKYFGEPQLN 137

Query: 927  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 748
            +N+NN G   DYCNDFDLRKPLDR FFSG+NVDCVSI+DSPNL +LQDRCAGFLA+FSRN
Sbjct: 138  LNTNNGG-HHDYCNDFDLRKPLDRHFFSGINVDCVSIKDSPNLTSLQDRCAGFLAKFSRN 196

Query: 747  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 568
            E SISSAGRIAIQSFCSPQCKY+N EWHMLSFIRSLKG+ARSSNAV+VVTFPPSLLSPSC
Sbjct: 197  EGSISSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKGLARSSNAVIVVTFPPSLLSPSC 256

Query: 567  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLN 427
            SKRLQHMADTLLSV+AIPDED+E+AKLLTGYQDM+GLLNV K+  LN
Sbjct: 257  SKRLQHMADTLLSVKAIPDEDQELAKLLTGYQDMIGLLNVTKLRGLN 303



 Score = 43.1 bits (100), Expect(2) = e-142
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -1

Query: 421 GTCDS*GHNILNKIAKT*IFGSRMSKSSP 335
           G+ DS  HNILNKI KT +FG RMSKSSP
Sbjct: 305 GSSDSGRHNILNKITKTEVFGFRMSKSSP 333


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  499 bits (1285), Expect = e-139
 Identities = 253/344 (73%), Positives = 282/344 (81%)
 Frame = -2

Query: 1287 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1108
            Q  G+K GPNGT+FLSSGIPDLDKILGGGF LGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 22   QAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLV 81

Query: 1107 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGHEKDLRIAWQYKKYFGDPQLN 928
            H QPLLYAS S +DP+ FLGTLP+P  SK+D+   RD   EK LRIAWQYKKYFG+ Q N
Sbjct: 82   HNQPLLYASPS-KDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLRIAWQYKKYFGEHQPN 140

Query: 927  INSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFSRN 748
             +S+ +  + +YCNDFDLRKPL+R F +  N+ C+SIQD PNLAA +D CA FLAQFSRN
Sbjct: 141  FDSHRD-TKHEYCNDFDLRKPLERXFLTAQNICCLSIQDPPNLAAXRDCCAKFLAQFSRN 199

Query: 747  ESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSPSC 568
             SSIS AGR+AIQSFC+PQC+Y+NMEW MLSFIRSLKGM R  NAV V+TFPPSLLSPS 
Sbjct: 200  NSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGMIRDLNAVAVITFPPSLLSPSS 259

Query: 567  SKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATTFS 388
            SKR QH+ADTLLSV+AIPDEDKE+A LLTGYQDMVGLLNVHKVA +NTQVPVILEATTFS
Sbjct: 260  SKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFS 319

Query: 387  IKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 256
            IKLQKRR+LVLECLNQAP+D               STK G LDF
Sbjct: 320  IKLQKRRYLVLECLNQAPVDGSSGSSYASTGSCSGSTKTGTLDF 363


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  495 bits (1275), Expect = e-137
 Identities = 253/346 (73%), Positives = 283/346 (81%), Gaps = 2/346 (0%)
 Frame = -2

Query: 1287 QNSGIKHGPNGTMFLSSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLLLRNFMSQGLV 1108
            Q  G+K GPNGT+FLSSGIPDLDKILGGGF LGSLVMVMED EAPHHMLLLRNFMSQGLV
Sbjct: 19   QAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHHMLLLRNFMSQGLV 78

Query: 1107 HKQPLLYASASSRDPKGFLGTLPAPGSSKEDKDKTRDLGH--EKDLRIAWQYKKYFGDPQ 934
            H QPLLYAS S +DP+ FLGTLP+P  SK+D+   RD     EK LRIAWQYKKYFG+ +
Sbjct: 79   HNQPLLYASPS-KDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEKGLRIAWQYKKYFGEHR 137

Query: 933  LNINSNNNGAQQDYCNDFDLRKPLDRQFFSGMNVDCVSIQDSPNLAALQDRCAGFLAQFS 754
             N +S+ +  + +YCNDFDLRKPL+R F +  N+ C+SIQD PNLAA +D CA FLAQFS
Sbjct: 138  PNFDSHRD-TKHEYCNDFDLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFS 196

Query: 753  RNESSISSAGRIAIQSFCSPQCKYANMEWHMLSFIRSLKGMARSSNAVVVVTFPPSLLSP 574
            RN SSIS AGR+AIQSFC+PQC+Y+NMEW MLSFIRSLKGM R SNAV V+TFPPSLLSP
Sbjct: 197  RNNSSISCAGRVAIQSFCAPQCEYSNMEWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSP 256

Query: 573  SCSKRLQHMADTLLSVRAIPDEDKEMAKLLTGYQDMVGLLNVHKVARLNTQVPVILEATT 394
            S SKR QH+ADTLLSV+AIPDEDKE+A LLTGYQDMVGLLNVHKVA +NTQVPVILEATT
Sbjct: 257  SSSKRWQHIADTLLSVKAIPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATT 316

Query: 393  FSIKLQKRRFLVLECLNQAPIDXXXXXXXXXXXXXXXSTKAGPLDF 256
            FSIKLQKRR+LVLECLNQAP+D               STK G LDF
Sbjct: 317  FSIKLQKRRYLVLECLNQAPVDGSSGSSYASTGSCSGSTKTGTLDF 362


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