BLASTX nr result

ID: Glycyrrhiza24_contig00003163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003163
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39424.1| unknown [Lotus japonicus]                              214   1e-53
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic...   214   1e-53
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   212   5e-53
gb|AFK46353.1| unknown [Lotus japonicus]                              209   5e-52
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   206   3e-51

>gb|AFK39424.1| unknown [Lotus japonicus]
          Length = 133

 Score =  214 bits (545), Expect = 1e-53
 Identities = 106/107 (99%), Positives = 107/107 (100%)
 Frame = -2

Query: 671 VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 492
           VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS
Sbjct: 11  VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 70

Query: 491 KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQS 351
           KVRFMVIPDMLKNAPMFKRLDA+IKGKGASLGVGRGRAVAMRAKAQS
Sbjct: 71  KVRFMVIPDMLKNAPMFKRLDAKIKGKGASLGVGRGRAVAMRAKAQS 117


>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|355524159|gb|AET04613.1| Small nuclear
           ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|388503694|gb|AFK39913.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  214 bits (545), Expect = 1e-53
 Identities = 106/107 (99%), Positives = 107/107 (100%)
 Frame = -2

Query: 671 VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 492
           VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 491 KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQS 351
           KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQ+
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQA 115


>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  212 bits (540), Expect = 5e-53
 Identities = 105/107 (98%), Positives = 107/107 (100%)
 Frame = -2

Query: 671 VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 492
           VKLLHEASGHVVTVELKSGELYRG+MIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 491 KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQS 351
           KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQ+
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQA 115


>gb|AFK46353.1| unknown [Lotus japonicus]
          Length = 132

 Score =  209 bits (531), Expect = 5e-52
 Identities = 101/107 (94%), Positives = 107/107 (100%)
 Frame = -2

Query: 671 VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 492
           VKLLHE+SGH+V+VELKSGELYRG+MIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS
Sbjct: 9   VKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 491 KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQS 351
           KVRFMVIPDMLKNAPMFKRLDAR+KGKGASLGVGRGRAVAMRAKAQ+
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGRGRAVAMRAKAQA 115


>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  206 bits (525), Expect = 3e-51
 Identities = 101/107 (94%), Positives = 106/107 (99%)
 Frame = -2

Query: 671 VKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 492
           VKLLHEA+GHVV+VELKSGELYRG+MIECEDNWNCQLE+ITYTAKDGK SQLEHVFIRGS
Sbjct: 9   VKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQLEHVFIRGS 68

Query: 491 KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQS 351
           KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQ+
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGRGRAVAMRAKAQA 115


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