BLASTX nr result

ID: Glycyrrhiza24_contig00003162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003162
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   208   8e-52
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic...   207   2e-51
gb|AFK39424.1| unknown [Lotus japonicus]                              206   4e-51
gb|AFK46353.1| unknown [Lotus japonicus]                              205   9e-51
ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|2...   203   3e-50

>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  208 bits (530), Expect = 8e-52
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +1

Query: 91  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 270
           MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 271 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 399
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103


>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|355524159|gb|AET04613.1| Small nuclear
           ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|388503694|gb|AFK39913.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 91  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 270
           MSRSLGIPVKLLHEASGHVVTVELKSGELYRG+MIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 271 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 399
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103


>gb|AFK39424.1| unknown [Lotus japonicus]
          Length = 133

 Score =  206 bits (524), Expect = 4e-51
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +1

Query: 91  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 270
           MSRSLGIPVKLLHEASGHVVTVELKSGELYRG+MIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 3   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL 62

Query: 271 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 399
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDA+IKGKGASLGVGR
Sbjct: 63  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGASLGVGR 105


>gb|AFK46353.1| unknown [Lotus japonicus]
          Length = 132

 Score =  205 bits (521), Expect = 9e-51
 Identities = 99/103 (96%), Positives = 103/103 (100%)
 Frame = +1

Query: 91  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 270
           MSRSLGIPVKLLHE+SGH+V+VELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1   MSRSLGIPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 271 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 399
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+KGKGASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGR 103


>ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|222843648|gb|EEE81195.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  203 bits (517), Expect = 3e-50
 Identities = 99/103 (96%), Positives = 101/103 (98%)
 Frame = +1

Query: 91  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 270
           MSRSLGIPVKLLHEASGH+VTVELKSGELYRGSM+ECEDNWNCQLESITYTAKDGK SQL
Sbjct: 1   MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL 60

Query: 271 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 399
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGK ASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASLGVGR 103


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