BLASTX nr result

ID: Glycyrrhiza24_contig00003140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003140
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27147.3| unnamed protein product [Vitis vinifera]              228   1e-57
emb|CBI24890.3| unnamed protein product [Vitis vinifera]              225   5e-57
ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [V...   224   2e-56
gb|AAA34366.1| ribosomal protein L41 [Candida maltosa]                223   3e-56
ref|XP_002278803.2| PREDICTED: 60S ribosomal protein L44-like [V...   222   6e-56

>emb|CBI27147.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  228 bits (580), Expect = 1e-57
 Identities = 106/108 (98%), Positives = 108/108 (100%)
 Frame = +3

Query: 81  AVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPV 260
           +VTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPV
Sbjct: 207 SVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPV 266

Query: 261 FHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 404
           FHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 267 FHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 314


>emb|CBI24890.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  225 bits (574), Expect = 5e-57
 Identities = 105/111 (94%), Positives = 107/111 (96%)
 Frame = +3

Query: 72  PTRAVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQT 251
           P +   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQT
Sbjct: 30  PPKPPKMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQT 89

Query: 252 KPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 404
           KPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 90  KPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 140


>ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
           gi|255543771|ref|XP_002512948.1| 60S ribosomal protein
           L44 [Ricinus communis] gi|449436355|ref|XP_004135958.1|
           PREDICTED: 60S ribosomal protein L44-like [Cucumis
           sativus] gi|449461677|ref|XP_004148568.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449488799|ref|XP_004158175.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449524246|ref|XP_004169134.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|2500380|sp|Q96499.3|RL44_GOSHI RecName: Full=60S
           ribosomal protein L44 gi|1553129|gb|AAB08726.1|
           ribosomal protein L44 isoform a [Gossypium hirsutum]
           gi|1553131|gb|AAB08727.1| ribosomal protein L44 isoform
           b [Gossypium hirsutum] gi|223547959|gb|EEF49451.1| 60S
           ribosomal protein L44 [Ricinus communis]
          Length = 105

 Score =  224 bits (570), Expect = 2e-56
 Identities = 104/105 (99%), Positives = 105/105 (100%)
 Frame = +3

Query: 90  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 269
           MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 270 KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 404
           KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105


>gb|AAA34366.1| ribosomal protein L41 [Candida maltosa]
          Length = 105

 Score =  223 bits (567), Expect = 3e-56
 Identities = 103/105 (98%), Positives = 105/105 (100%)
 Frame = +3

Query: 90  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 269
           MVNVPKTKKTYCKSKEC+KHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 270 KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 404
           KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_002278803.2| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
          Length = 190

 Score =  222 bits (565), Expect = 6e-56
 Identities = 103/104 (99%), Positives = 104/104 (100%)
 Frame = +3

Query: 93  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKK 272
           VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHKK
Sbjct: 87  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 146

Query: 273 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 404
           AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF
Sbjct: 147 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 190



 Score =  183 bits (464), Expect = 3e-44
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +3

Query: 90  MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 269
           MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 270 KAKTTKKIVLRLQCQGCKHVSQHPIK 347
           KAKTTKKIVLRLQCQGCKHVSQHPIK
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHPIK 86


Top