BLASTX nr result

ID: Glycyrrhiza24_contig00003104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003104
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...    98   6e-19
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...    97   1e-18
gb|ACU18621.1| unknown [Glycine max]                                   97   1e-18
gb|AFK41560.1| unknown [Medicago truncatula]                           94   9e-18
gb|ACJ84959.1| unknown [Medicago truncatula]                           94   9e-18

>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/75 (73%), Positives = 63/75 (84%), Gaps = 5/75 (6%)
 Frame = +2

Query: 170 MAALTSLSFSAVNRCLERKVTLPSTRFV----EVFGIRTHFSYHHCVGVRAANSASKMVI 337
           MAALTSLSFSAV  C ERKVTL STRF+    E+FG RT FSYH+ VGVRA+NSASKMV+
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSELFGFRTDFSYHY-VGVRASNSASKMVV 59

Query: 338 QCMSSSTDL-PTVAE 379
           QCMSS+TD+ PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 5/75 (6%)
 Frame = +2

Query: 170 MAALTSLSFSAVNRCLERKVTLPSTRFV----EVFGIRTHFSYHHCVGVRAANSASKMVI 337
           MAALTSLSFSAV  C ERKVTL STRF+    E+FG RT FSYH+ VGVRA+NS SKMV+
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSEIFGFRTDFSYHY-VGVRASNSPSKMVV 59

Query: 338 QCMSSSTDL-PTVAE 379
           QCMSS+TD+ PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>gb|ACU18621.1| unknown [Glycine max]
          Length = 297

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 55/75 (73%), Positives = 63/75 (84%), Gaps = 5/75 (6%)
 Frame = +2

Query: 170 MAALTSLSFSAVNRCLERKVTLPSTRFV----EVFGIRTHFSYHHCVGVRAANSASKMVI 337
           MAALTSLSFSAV  C ERKVTL STRF+    E+FG RT FSYH+ VGVRA+NSASKMV+
Sbjct: 1   MAALTSLSFSAVIHCSERKVTLSSTRFLASSSELFGFRTDFSYHY-VGVRASNSASKMVV 59

Query: 338 QCMSSSTDL-PTVAE 379
           QCMSS+TD+ PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>gb|AFK41560.1| unknown [Medicago truncatula]
          Length = 287

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
 Frame = +2

Query: 170 MAALTSLSFSAVNRCLERKVTLPSTRFV----EVFGIRTHFSYHHCVGVRAANSASKMVI 337
           MAALTSLSFSA ++C +RK TL STRF+    ++FGIRT  SYH CVGVR  NSASKMVI
Sbjct: 1   MAALTSLSFSATSQCSQRKSTLSSTRFLASSSDMFGIRTDSSYH-CVGVRVGNSASKMVI 59

Query: 338 QCMSSSTDLPTVAE 379
           QCMSS TD+P+V+E
Sbjct: 60  QCMSSVTDVPSVSE 73


>gb|ACJ84959.1| unknown [Medicago truncatula]
          Length = 287

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
 Frame = +2

Query: 170 MAALTSLSFSAVNRCLERKVTLPSTRFV----EVFGIRTHFSYHHCVGVRAANSASKMVI 337
           MAALTSLSFSA ++C +RK TL STRF+    ++FGIRT  SYH CVGVR  NSASKMVI
Sbjct: 1   MAALTSLSFSATSQCSQRKSTLSSTRFLASSSDMFGIRTDSSYH-CVGVRVGNSASKMVI 59

Query: 338 QCMSSSTDLPTVAE 379
           QCMSS TD+P+V+E
Sbjct: 60  QCMSSVTDVPSVSE 73


Top