BLASTX nr result

ID: Glycyrrhiza24_contig00003103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003103
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   105   5e-21
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   103   1e-20
gb|ACU18621.1| unknown [Glycine max]                                  103   1e-20
gb|AFK41560.1| unknown [Medicago truncatula]                           96   4e-18
gb|ACJ84959.1| unknown [Medicago truncatula]                           96   4e-18

>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/75 (76%), Positives = 64/75 (85%), Gaps = 4/75 (5%)
 Frame = -1

Query: 213 MAALTSLSFSAVNRCSERKLTLPSTRF----AEVFGIRTDFSYHHCVGVRAANSASKMVI 46
           MAALTSLSFSAV  CSERK+TL STRF    +E+FG RTDFSYH+ VGVRA+NSASKMV+
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSELFGFRTDFSYHY-VGVRASNSASKMVV 59

Query: 45  QCMSSATDDLPTVAE 1
           QCMSSATD  PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 4/75 (5%)
 Frame = -1

Query: 213 MAALTSLSFSAVNRCSERKLTLPSTRF----AEVFGIRTDFSYHHCVGVRAANSASKMVI 46
           MAALTSLSFSAV  CSERK+TL STRF    +E+FG RTDFSYH+ VGVRA+NS SKMV+
Sbjct: 1   MAALTSLSFSAVTHCSERKVTLSSTRFLASSSEIFGFRTDFSYHY-VGVRASNSPSKMVV 59

Query: 45  QCMSSATDDLPTVAE 1
           QCMSSATD  PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>gb|ACU18621.1| unknown [Glycine max]
          Length = 297

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/75 (76%), Positives = 64/75 (85%), Gaps = 4/75 (5%)
 Frame = -1

Query: 213 MAALTSLSFSAVNRCSERKLTLPSTRF----AEVFGIRTDFSYHHCVGVRAANSASKMVI 46
           MAALTSLSFSAV  CSERK+TL STRF    +E+FG RTDFSYH+ VGVRA+NSASKMV+
Sbjct: 1   MAALTSLSFSAVIHCSERKVTLSSTRFLASSSELFGFRTDFSYHY-VGVRASNSASKMVV 59

Query: 45  QCMSSATDDLPTVAE 1
           QCMSSATD  PTV+E
Sbjct: 60  QCMSSATDVPPTVSE 74


>gb|AFK41560.1| unknown [Medicago truncatula]
          Length = 287

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
 Frame = -1

Query: 213 MAALTSLSFSAVNRCSERKLTLPSTRF----AEVFGIRTDFSYHHCVGVRAANSASKMVI 46
           MAALTSLSFSA ++CS+RK TL STRF    +++FGIRTD SYH CVGVR  NSASKMVI
Sbjct: 1   MAALTSLSFSATSQCSQRKSTLSSTRFLASSSDMFGIRTDSSYH-CVGVRVGNSASKMVI 59

Query: 45  QCMSSATDDLPTVAE 1
           QCMSS T D+P+V+E
Sbjct: 60  QCMSSVT-DVPSVSE 73


>gb|ACJ84959.1| unknown [Medicago truncatula]
          Length = 287

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
 Frame = -1

Query: 213 MAALTSLSFSAVNRCSERKLTLPSTRF----AEVFGIRTDFSYHHCVGVRAANSASKMVI 46
           MAALTSLSFSA ++CS+RK TL STRF    +++FGIRTD SYH CVGVR  NSASKMVI
Sbjct: 1   MAALTSLSFSATSQCSQRKSTLSSTRFLASSSDMFGIRTDSSYH-CVGVRVGNSASKMVI 59

Query: 45  QCMSSATDDLPTVAE 1
           QCMSS T D+P+V+E
Sbjct: 60  QCMSSVT-DVPSVSE 73


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