BLASTX nr result

ID: Glycyrrhiza24_contig00003102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003102
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   261   3e-68
gb|AFK45541.1| unknown [Medicago truncatula]                          257   6e-67
ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   257   6e-67
ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   257   6e-67
gb|ACU18621.1| unknown [Glycine max]                                  257   6e-67

>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  261 bits (668), Expect = 3e-68
 Identities = 127/143 (88%), Positives = 136/143 (95%)
 Frame = -1

Query: 431 PTVAETKMNFLKAYKRPIPSIYNTVLQDLIVQQHLMRYKASYRYDPVFALGFVTVYDKLM 252
           PTV+ETK+NFLKAYKRPIPSIYNTVLQ+LIVQQHLM+YK SYRYDPVFALGFVT+YDKLM
Sbjct: 70  PTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALGFVTIYDKLM 129

Query: 251 EGYPSDEDRDAIFKAYIKALNEDPEEYRIDAQKLEEWARAQNPTSLVEFSSREGEVEGKL 72
           EGYPSDEDRDAIF+AYIKAL EDPE+YRIDA+KLEEWAR Q PTSLVEFSS+EGEVEG L
Sbjct: 130 EGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQKPTSLVEFSSKEGEVEGIL 189

Query: 71  KDIAARAGRKGEFSYSRFFAVGL 3
           KDIA RAG KGEFSYSRFFAVGL
Sbjct: 190 KDIAERAGGKGEFSYSRFFAVGL 212


>gb|AFK45541.1| unknown [Medicago truncatula]
          Length = 303

 Score =  257 bits (657), Expect = 6e-67
 Identities = 125/145 (86%), Positives = 135/145 (93%)
 Frame = -1

Query: 437 DLPTVAETKMNFLKAYKRPIPSIYNTVLQDLIVQQHLMRYKASYRYDPVFALGFVTVYDK 258
           D PTV+ETK+NFLKAYKRPIPSIYN+VLQ+LIVQQHLMRYK SYRYDPVFALGFVTVYD+
Sbjct: 70  DPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQ 129

Query: 257 LMEGYPSDEDRDAIFKAYIKALNEDPEEYRIDAQKLEEWARAQNPTSLVEFSSREGEVEG 78
           LMEGYPSDEDRDAIF+AYI AL EDP +YR+DAQKLEEWARAQN TSL+EFSSREGEVEG
Sbjct: 130 LMEGYPSDEDRDAIFQAYINALKEDPAQYRVDAQKLEEWARAQNATSLIEFSSREGEVEG 189

Query: 77  KLKDIAARAGRKGEFSYSRFFAVGL 3
            LKDIA RAG  G+FSYSRFFAVGL
Sbjct: 190 TLKDIAERAGGNGDFSYSRFFAVGL 214


>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  257 bits (657), Expect = 6e-67
 Identities = 125/143 (87%), Positives = 135/143 (94%)
 Frame = -1

Query: 431 PTVAETKMNFLKAYKRPIPSIYNTVLQDLIVQQHLMRYKASYRYDPVFALGFVTVYDKLM 252
           PTV+ETK+NFLKAYKRPIPSIYNTVLQ+LIVQQHLM+YK SYRYDPVFALGFVT+YDKLM
Sbjct: 70  PTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALGFVTIYDKLM 129

Query: 251 EGYPSDEDRDAIFKAYIKALNEDPEEYRIDAQKLEEWARAQNPTSLVEFSSREGEVEGKL 72
           EGYPSDEDRDAIF+AYIKAL EDPE+YRIDA+KLEEWAR Q+PTSLVEFSS+EGE E  L
Sbjct: 130 EGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEFSSKEGEAERIL 189

Query: 71  KDIAARAGRKGEFSYSRFFAVGL 3
           KDIA RAG KGEFSYSRFFAVGL
Sbjct: 190 KDIAERAGGKGEFSYSRFFAVGL 212


>ref|XP_003527468.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  257 bits (657), Expect = 6e-67
 Identities = 124/143 (86%), Positives = 137/143 (95%)
 Frame = -1

Query: 431 PTVAETKMNFLKAYKRPIPSIYNTVLQDLIVQQHLMRYKASYRYDPVFALGFVTVYDKLM 252
           PTV+ETK+NFLKAYKRPIPSIYNTVLQ+LIVQQHLMRYK SYRYD VFALGFVTVY++LM
Sbjct: 66  PTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLM 125

Query: 251 EGYPSDEDRDAIFKAYIKALNEDPEEYRIDAQKLEEWARAQNPTSLVEFSSREGEVEGKL 72
           EGYPSDEDRDAIF+AYI+AL EDPE+YR+DA+KLEEWARAQNPTSLV+FSSREGEVEG L
Sbjct: 126 EGYPSDEDRDAIFQAYIQALKEDPEQYRVDAKKLEEWARAQNPTSLVDFSSREGEVEGIL 185

Query: 71  KDIAARAGRKGEFSYSRFFAVGL 3
           KDIA RAG KG+FSYSRFFA+GL
Sbjct: 186 KDIAERAGGKGDFSYSRFFAIGL 208


>gb|ACU18621.1| unknown [Glycine max]
          Length = 297

 Score =  257 bits (657), Expect = 6e-67
 Identities = 125/143 (87%), Positives = 135/143 (94%)
 Frame = -1

Query: 431 PTVAETKMNFLKAYKRPIPSIYNTVLQDLIVQQHLMRYKASYRYDPVFALGFVTVYDKLM 252
           PTV+ETK+NFLKAYKRPIPSIYNTVLQ+LIVQQHLM+YK SYRYDPVFALGFVT+YDKLM
Sbjct: 70  PTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMKYKRSYRYDPVFALGFVTIYDKLM 129

Query: 251 EGYPSDEDRDAIFKAYIKALNEDPEEYRIDAQKLEEWARAQNPTSLVEFSSREGEVEGKL 72
           EGYPSDEDRDAIF+AYIKAL EDPE+YRIDA+KLEEWAR Q+PTSLVEFSS+EGE E  L
Sbjct: 130 EGYPSDEDRDAIFQAYIKALKEDPEQYRIDARKLEEWARVQSPTSLVEFSSKEGEAERIL 189

Query: 71  KDIAARAGRKGEFSYSRFFAVGL 3
           KDIA RAG KGEFSYSRFFAVGL
Sbjct: 190 KDIAERAGGKGEFSYSRFFAVGL 212


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