BLASTX nr result

ID: Glycyrrhiza24_contig00003084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003084
         (1548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycin...   357   4e-96
gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK4217...   353   5e-95
ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homol...   345   2e-92
ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleop...   342   2e-91
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   320   6e-85

>ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
           gi|255636483|gb|ACU18580.1| unknown [Glycine max]
          Length = 377

 Score =  357 bits (917), Expect = 4e-96
 Identities = 181/208 (87%), Positives = 187/208 (89%)
 Frame = +2

Query: 152 MESPGTDHHVVGTGEPNDVVRPFXXXXXXXXXXXXXXPLSGDGASPGKIFIGGLARETTI 331
           MESPG +H VVG  EPNDVV PF              PL+GDGASPGKIFIGGLARETTI
Sbjct: 1   MESPGNEH-VVGGAEPNDVVTPFSHREEPHNSQ----PLTGDGASPGKIFIGGLARETTI 55

Query: 332 AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINGKQVEIKR 511
           AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIE+ H+INGKQVEIKR
Sbjct: 56  AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEEPHVINGKQVEIKR 115

Query: 512 TIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGF 691
           TIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGF
Sbjct: 116 TIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGF 175

Query: 692 ITFDSEEAVDDLLSMGNKIEFAGTQVEI 775
           ITF+SEEAVDDLLSMGNKI+FAG QVEI
Sbjct: 176 ITFESEEAVDDLLSMGNKIDFAGAQVEI 203


>gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK42175.1| unknown
           [Lotus japonicus]
          Length = 373

 Score =  353 bits (907), Expect = 5e-95
 Identities = 180/208 (86%), Positives = 187/208 (89%)
 Frame = +2

Query: 152 MESPGTDHHVVGTGEPNDVVRPFXXXXXXXXXXXXXXPLSGDGASPGKIFIGGLARETTI 331
           MESPG DH VVG GE NDV R +              PL+GDGASPGKIFIGGLARETTI
Sbjct: 1   MESPGNDH-VVGGGESNDVARTYSHREDHDQHHNSQ-PLTGDGASPGKIFIGGLARETTI 58

Query: 332 AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINGKQVEIKR 511
           AQFIKHFGKYGEITDSVIMKDRKT QPRGFGFITYADPSVVDKVIED+HIINGKQVEIKR
Sbjct: 59  AQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKR 118

Query: 512 TIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGF 691
           TIPRGAVGSKDF+TKKIFVGGIPSNVTEDEFRDFFTRYGEVKD+QIMRDHSTNRSRGFGF
Sbjct: 119 TIPRGAVGSKDFKTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGF 178

Query: 692 ITFDSEEAVDDLLSMGNKIEFAGTQVEI 775
           ITFDSE+AVDDLLSMGNKI+FAGTQVEI
Sbjct: 179 ITFDSEDAVDDLLSMGNKIDFAGTQVEI 206


>ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
           max]
          Length = 372

 Score =  345 bits (885), Expect = 2e-92
 Identities = 177/210 (84%), Positives = 186/210 (88%), Gaps = 2/210 (0%)
 Frame = +2

Query: 152 MESPGTDHHVVGTGEPNDVVRPFXXXXXXXXXXXXXXPLSGDGASPGKIFIGGLARETTI 331
           M+SP ++HH V  G+ ND+VRPF              PL+GDGASPGKIFIGGLARETTI
Sbjct: 1   MDSPPSNHHAVD-GDANDLVRPFSHRDDDGKPQ----PLTGDGASPGKIFIGGLARETTI 55

Query: 332 AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINGKQVEIKR 511
           AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVD VIED+HIINGKQVEIKR
Sbjct: 56  AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKR 115

Query: 512 TIPRGAVG--SKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 685
           TIPRGAVG  SKDFRTKKIFVGGIPS VTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF
Sbjct: 116 TIPRGAVGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 175

Query: 686 GFITFDSEEAVDDLLSMGNKIEFAGTQVEI 775
           GFIT+DSEEAVDDLLS+GNKIEFAG QVEI
Sbjct: 176 GFITYDSEEAVDDLLSVGNKIEFAGAQVEI 205


>ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
           2-like [Glycine max]
          Length = 374

 Score =  342 bits (876), Expect = 2e-91
 Identities = 176/210 (83%), Positives = 184/210 (87%), Gaps = 2/210 (0%)
 Frame = +2

Query: 152 MESPGTDHHVVGTGEPNDVVRPFXXXXXXXXXXXXXXPLSGDGASPGKIFIGGLARETTI 331
           M+SP ++HH V  G+ NDVVR F              PL+GDGASPGKIFIGGLARETTI
Sbjct: 1   MDSPPSNHHAVD-GDANDVVRSFSHRDDDEDGKPQ--PLTGDGASPGKIFIGGLARETTI 57

Query: 332 AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINGKQVEIKR 511
           AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVD VIED+HIINGKQVEIKR
Sbjct: 58  AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKR 117

Query: 512 TIPRGAVG--SKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 685
           TIPRGA G  SKDFRTKKIFVGGIPS VTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF
Sbjct: 118 TIPRGAAGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 177

Query: 686 GFITFDSEEAVDDLLSMGNKIEFAGTQVEI 775
           GFIT+DSEEAVDDLLS+GNKIEFAG QVEI
Sbjct: 178 GFITYDSEEAVDDLLSVGNKIEFAGAQVEI 207


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  320 bits (820), Expect = 6e-85
 Identities = 158/161 (98%), Positives = 160/161 (99%)
 Frame = +2

Query: 293  KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED 472
            KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED
Sbjct: 1977 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED 2036

Query: 473  SHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIM 652
             HIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIM
Sbjct: 2037 PHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIM 2096

Query: 653  RDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIEFAGTQVEI 775
            RDHSTNRSRGFGFITFDSEEAVDDLLSMGNKI+FAG+QVEI
Sbjct: 2097 RDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEI 2137


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