BLASTX nr result

ID: Glycyrrhiza24_contig00003004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003004
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycin...   291   2e-76
ref|NP_001236439.1| uncharacterized protein LOC100526953 [Glycin...   290   5e-76
gb|AFK36859.1| unknown [Lotus japonicus]                              288   1e-75
ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus...   251   2e-64
ref|XP_002317356.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64

>ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycine max]
           gi|255628105|gb|ACU14397.1| unknown [Glycine max]
          Length = 207

 Score =  291 bits (744), Expect = 2e-76
 Identities = 145/170 (85%), Positives = 153/170 (90%), Gaps = 4/170 (2%)
 Frame = +3

Query: 210 TLRLTSPKPLHSPTVVYAAPEVLDSP----DPPQETREDESEPTTFQVGDLETPSTSSVS 377
           TLR+T PKPLHS TVV+ A E LDS     DPP ET +D+S+ TTF+VGDL TPSTS++S
Sbjct: 38  TLRVTCPKPLHSSTVVHVATEALDSSPDPLDPPPETLDDDSDATTFEVGDLGTPSTSAIS 97

Query: 378 IGADADAMAPKQKIRIKLRSYWAPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVL 557
           IG DAD MAPKQKIRIKLRSYW PLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVL
Sbjct: 98  IGGDADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVL 157

Query: 558 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 707
           KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 158 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207


>ref|NP_001236439.1| uncharacterized protein LOC100526953 [Glycine max]
           gi|255631238|gb|ACU15986.1| unknown [Glycine max]
          Length = 205

 Score =  290 bits (741), Expect = 5e-76
 Identities = 144/171 (84%), Positives = 152/171 (88%), Gaps = 4/171 (2%)
 Frame = +3

Query: 207 NTLRLTSPKPLHSPTVVYAAPEVLDSP----DPPQETREDESEPTTFQVGDLETPSTSSV 374
           NTLR+  PKP HS TVV+ APE LDS     DPP ET +D+S+ TTF+VGDL TPSTS++
Sbjct: 35  NTLRVKCPKPSHSTTVVHVAPEALDSSLDPLDPPPETLDDDSDATTFEVGDLGTPSTSAI 94

Query: 375 SIGADADAMAPKQKIRIKLRSYWAPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCV 554
           SIG DAD MAPKQKIRIKLRSYW PLIEDSCKQILDAAR TNAKTMGPVPLPTKKRIYCV
Sbjct: 95  SIGGDADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCV 154

Query: 555 LKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 707
           LKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 155 LKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 205


>gb|AFK36859.1| unknown [Lotus japonicus]
          Length = 196

 Score =  288 bits (738), Expect = 1e-75
 Identities = 147/168 (87%), Positives = 153/168 (91%)
 Frame = +3

Query: 204 GNTLRLTSPKPLHSPTVVYAAPEVLDSPDPPQETREDESEPTTFQVGDLETPSTSSVSIG 383
           GNTLRLT+ KPLHS TV+ AAPEVLDS     ET ED+SE +T QVGDL TPSTSS+SIG
Sbjct: 33  GNTLRLTTLKPLHSSTVLKAAPEVLDST----ETLEDDSESSTLQVGDLGTPSTSSISIG 88

Query: 384 ADADAMAPKQKIRIKLRSYWAPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVLKS 563
            DADAMAPKQKIRIKLRSYW PLIEDSCKQIL+AAR TNAKTMGPVPLPTKKRIYCVLKS
Sbjct: 89  GDADAMAPKQKIRIKLRSYWVPLIEDSCKQILEAARNTNAKTMGPVPLPTKKRIYCVLKS 148

Query: 564 PHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 707
           PHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 149 PHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 196


>ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus communis]
           gi|223537962|gb|EEF39575.1| 30S ribosomal protein S10,
           putative [Ricinus communis]
          Length = 208

 Score =  251 bits (641), Expect = 2e-64
 Identities = 131/170 (77%), Positives = 144/170 (84%), Gaps = 3/170 (1%)
 Frame = +3

Query: 207 NTLRLTSPKPLHSPTVVYAAPEVLDSP---DPPQETREDESEPTTFQVGDLETPSTSSVS 377
           +TL+L++     S + + AAPE LDS    DPP ET  DE +  +FQ+GD ET S+ S+S
Sbjct: 45  STLKLST-----STSRLCAAPETLDSQATLDPPLETT-DEPDSDSFQIGDSETSSSPSIS 98

Query: 378 IGADADAMAPKQKIRIKLRSYWAPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVL 557
           I ADAD +APKQKIRIKLRSYW PLIEDSCKQI+DAAR TNAKTMGPVPLPTKKRIYCVL
Sbjct: 99  IAADADKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVL 158

Query: 558 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 707
           KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 159 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 208


>ref|XP_002317356.1| predicted protein [Populus trichocarpa] gi|222860421|gb|EEE97968.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  251 bits (641), Expect = 2e-64
 Identities = 133/170 (78%), Positives = 139/170 (81%), Gaps = 3/170 (1%)
 Frame = +3

Query: 207 NTLRLTSPKPLHSPTVVYAAPEVLDSP---DPPQETREDESEPTTFQVGDLETPSTSSVS 377
           N L+ T      S   V+AAPE LDS    DP  +T  D  E  TFQVGD ETPS  SVS
Sbjct: 37  NVLKTTLKPSSLSTCRVFAAPEALDSQTTLDPLPDTL-DGPESDTFQVGDSETPSHQSVS 95

Query: 378 IGADADAMAPKQKIRIKLRSYWAPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVL 557
           I ADAD MAPKQKIRIKLRS+W  LIEDSCKQI+DAARTTNAKTMGPVPLPTKKR+YCVL
Sbjct: 96  IAADADMMAPKQKIRIKLRSFWVKLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRVYCVL 155

Query: 558 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 707
           KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 156 KSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 205


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