BLASTX nr result

ID: Glycyrrhiza24_contig00002998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002998
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38283.1| unknown [Lotus japonicus]                              362   1e-97
ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycin...   359   9e-97
ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatul...   348   3e-93
gb|ACJ85270.1| unknown [Medicago truncatula]                          348   3e-93
ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   347   5e-93

>gb|AFK38283.1| unknown [Lotus japonicus]
          Length = 273

 Score =  362 bits (930), Expect = 1e-97
 Identities = 204/284 (71%), Positives = 222/284 (78%), Gaps = 3/284 (1%)
 Frame = +1

Query: 238  MAATAAT-GIAS-LFSSSINNTVKCCLRSKNNCFMLAS-AVSHSLEPLSIGTTISAHKLW 408
            MAATAA  GIAS LFSSSIN  VKC LRSKN C +LAS + S+ +EPLSIG TIS +KLW
Sbjct: 1    MAATAAAAGIASSLFSSSINTNVKC-LRSKN-CSVLASVSQSYLVEPLSIGGTISHNKLW 58

Query: 409  VPRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTDSSVRSTKLYFGNLP 588
            VPRIS                                        +SSV +TKLYFGNLP
Sbjct: 59   VPRISAAVAQEEVALAAEADDGLVEEKVEEVVAEEE--------ANSSV-NTKLYFGNLP 109

Query: 589  YSVDSAQLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMTCIEDCHAVIENLDGKEFMG 768
            YSVDSAQLAGLIEEYGSAELIEVLYDRD+GKSRGFAFVTM+C+EDC+ VIENLDGKEF+G
Sbjct: 110  YSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIENLDGKEFLG 169

Query: 769  RTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLAEAFQDYGTVVGARVLYDGET 948
            RTLRVN SDKPKPKEPLYPETE+KLFVGNLSWTVTSESL + FQ+YGTVVGARVLYDGET
Sbjct: 170  RTLRVNLSDKPKPKEPLYPETEHKLFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGET 229

Query: 949  GRSRGYGFVCYSKKSEMEAALSYLNNVELEGRPMRVSLAEGKRS 1080
            GRSRGYGFVCYSK+SE+E AL  LNNVELEGR +RVSLAEGKRS
Sbjct: 230  GRSRGYGFVCYSKRSELETALISLNNVELEGRAIRVSLAEGKRS 273


>ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
            gi|255645445|gb|ACU23218.1| unknown [Glycine max]
            gi|255645775|gb|ACU23380.1| unknown [Glycine max]
          Length = 289

 Score =  359 bits (922), Expect = 9e-97
 Identities = 193/292 (66%), Positives = 217/292 (74%), Gaps = 11/292 (3%)
 Frame = +1

Query: 238  MAATAATGIASLFSSSINNTVKCCLRSKNNCFML-----------ASAVSHSLEPLSIGT 384
            MAATAA GIASLFSSSIN+    CLRS  NC ++              VSH +EPLSIG 
Sbjct: 1    MAATAAAGIASLFSSSINSVK--CLRSSKNCSIIDPLITTVPSNRGMFVSHLVEPLSIGG 58

Query: 385  TISAHKLWVPRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTDSSVRST 564
             I++HKLW PRIS                                        DS   +T
Sbjct: 59   AINSHKLWGPRISAAVAQEEAVVVADDEVDDGAGLVEEEKVEENEGEVVAE-QDSDSSAT 117

Query: 565  KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMTCIEDCHAVIEN 744
            KLYFGNLPYSVDSA+LAGLI+++GSAELIEVLYDRDTGKSRGFAFVTM+CIEDC+AVIEN
Sbjct: 118  KLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 177

Query: 745  LDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLAEAFQDYGTVVGA 924
            LDGKEF+GRTLRVNFS KPKPKEPLYPETE+KLFVGNLSW+VT+E L +AFQ+YGTVVGA
Sbjct: 178  LDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGA 237

Query: 925  RVLYDGETGRSRGYGFVCYSKKSEMEAALSYLNNVELEGRPMRVSLAEGKRS 1080
            RVLYDGETGRSRGYGFVCYS K+EMEAAL+ LN+VELEGR MRVSLA+GKR+
Sbjct: 238  RVLYDGETGRSRGYGFVCYSTKAEMEAALAALNDVELEGRAMRVSLAQGKRA 289


>ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
            gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein
            [Medicago truncatula]
          Length = 387

 Score =  348 bits (892), Expect = 3e-93
 Identities = 196/289 (67%), Positives = 219/289 (75%), Gaps = 10/289 (3%)
 Frame = +1

Query: 244  ATAATGIASLFSSSINNTVKCCLRSKNNCF------MLASAVSHS-LEPLSIGTTISAHK 402
            ATAA G+ASLFSSSIN TVKC LRSKN+        M  S +S S +EPLSIGTT+S HK
Sbjct: 104  ATAA-GMASLFSSSIN-TVKC-LRSKNSSLDTSSNRMFVSLISQSSVEPLSIGTTVS-HK 159

Query: 403  LWVPRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TVTDSSVRSTKLY 573
            LW PRIS                                        TV +   R TKLY
Sbjct: 160  LWFPRISVAVAQEEAVVAVEDEEKVVVEEEEKEEEEVVEEKENIGGETVAEVDTR-TKLY 218

Query: 574  FGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMTCIEDCHAVIENLDG 753
            FGNLPYSVDSA LAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTM+C+EDC+AVI+NLDG
Sbjct: 219  FGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDG 278

Query: 754  KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLAEAFQDYGTVVGARVL 933
            KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNL+WTVTSESL +AFQ++GTVVGARVL
Sbjct: 279  KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVL 338

Query: 934  YDGETGRSRGYGFVCYSKKSEMEAALSYLNNVELEGRPMRVSLAEGKRS 1080
            +DGETG+SRGYGFV Y+ KSEM+ AL+ ++NVELEGR +RVSLA+GKRS
Sbjct: 339  FDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGKRS 387


>gb|ACJ85270.1| unknown [Medicago truncatula]
          Length = 285

 Score =  348 bits (892), Expect = 3e-93
 Identities = 196/289 (67%), Positives = 219/289 (75%), Gaps = 10/289 (3%)
 Frame = +1

Query: 244  ATAATGIASLFSSSINNTVKCCLRSKNNCF------MLASAVSHS-LEPLSIGTTISAHK 402
            ATAA G+ASLFSSSIN TVKC LRSKN+        M  S +S S +EPLSIGTT+S HK
Sbjct: 2    ATAA-GMASLFSSSIN-TVKC-LRSKNSSLDTSSNRMFVSLISQSSVEPLSIGTTVS-HK 57

Query: 403  LWVPRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TVTDSSVRSTKLY 573
            LW PRIS                                        TV +   R TKLY
Sbjct: 58   LWFPRISVAVAQEEAVVAVEDEEKAVVEEEEKEEEEVVEEKENIGGETVAEVDTR-TKLY 116

Query: 574  FGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMTCIEDCHAVIENLDG 753
            FGNLPYSVDSA LAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTM+C+EDC+AVI+NLDG
Sbjct: 117  FGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDG 176

Query: 754  KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLAEAFQDYGTVVGARVL 933
            KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNL+WTVTSESL +AFQ++GTVVGARVL
Sbjct: 177  KEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVL 236

Query: 934  YDGETGRSRGYGFVCYSKKSEMEAALSYLNNVELEGRPMRVSLAEGKRS 1080
            +DGETG+SRGYGFV Y+ KSEM+ AL+ ++NVELEGR +RVSLA+GKRS
Sbjct: 237  FDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGKRS 285


>ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 282

 Score =  347 bits (890), Expect = 5e-93
 Identities = 188/292 (64%), Positives = 215/292 (73%), Gaps = 11/292 (3%)
 Frame = +1

Query: 238  MAATAATGIASLFSSSINNTVKCCLRSKNNCFMLASAV-----------SHSLEPLSIGT 384
            MAATAA GIASLFSSSIN+    CLRS  NC ++   +           SH +EPLSI  
Sbjct: 1    MAATAAAGIASLFSSSINSVK--CLRSSKNCSIIDPLITTVPSNRGMFGSHLVEPLSI-- 56

Query: 385  TISAHKLWVPRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTDSSVRST 564
              ++HKLW PRIS                                        DS   +T
Sbjct: 57   --NSHKLWGPRISAAVAQEEAVVVVDDDGAGLVEEEKVEENEGEAVAEQ----DSDSSAT 110

Query: 565  KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMTCIEDCHAVIEN 744
            KLYFGNLPYSVDSA+LAGLI++YGSAELIEVLYDRD+GKSRGFAFVTM+CIEDC+AVIEN
Sbjct: 111  KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVIEN 170

Query: 745  LDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLAEAFQDYGTVVGA 924
            LDGKEF+GRTLRVNFS KPKPKEPLYPETE+KLFVGNLSW+VT+E L +AFQ+YGTVVGA
Sbjct: 171  LDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGA 230

Query: 925  RVLYDGETGRSRGYGFVCYSKKSEMEAALSYLNNVELEGRPMRVSLAEGKRS 1080
            RVLYDGETGRSRGYGFVCYS ++EMEAA++ LN+VELEGR MRVSLA+GKR+
Sbjct: 231  RVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLAQGKRA 282


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