BLASTX nr result

ID: Glycyrrhiza24_contig00002990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002990
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542475.1| PREDICTED: probable pectate lyase 4-like [Gl...   603   e-170
ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vi...   554   e-155
gb|ABK93648.1| unknown [Populus trichocarpa]                          554   e-155
gb|ABK96132.1| unknown [Populus trichocarpa]                          552   e-154
emb|CBI32661.3| unnamed protein product [Vitis vinifera]              546   e-153

>ref|XP_003542475.1| PREDICTED: probable pectate lyase 4-like [Glycine max]
          Length = 366

 Score =  603 bits (1554), Expect = e-170
 Identities = 295/372 (79%), Positives = 317/372 (85%), Gaps = 7/372 (1%)
 Frame = +3

Query: 162  MGNSHVHR--KHRNSDPP-----PYKYGTSSTQPQPPPCHNNNMLSLPYSHVDSTLRALA 320
            MGNSH HR  KH NS PP     P+KY         P   N+ MLSLPY+HVD+TLR+LA
Sbjct: 1    MGNSHGHRHRKHGNSVPPNTVPPPHKYNPH------PTTSNSTMLSLPYTHVDTTLRSLA 54

Query: 321  GQAEGFGRFAIGGLHGPLYHVTSLADDGPGSLRDACRRKEPLWIVFEVSGTIHXXXXXXX 500
             QAEGFGRFAIGGLHGPL+ VTSLADDGPGSLRDACRRKEPLWIVFEVSGTI        
Sbjct: 55   AQAEGFGRFAIGGLHGPLHPVTSLADDGPGSLRDACRRKEPLWIVFEVSGTIQLSSYLNV 114

Query: 501  XXXKTIDGRGQRIKLTGKGLRMKECEHVIVCNLELEGGKGPDADAIQIKPNSKHIWIDRC 680
               KTIDGRGQRIKL+GKGLR+KECEHVI+CNLE EGG+G D DAIQIKPNSKHIWIDRC
Sbjct: 115  SSHKTIDGRGQRIKLSGKGLRLKECEHVIICNLEFEGGRGHDVDAIQIKPNSKHIWIDRC 174

Query: 681  TLSDFDDGLIDITRQSTDITISRCHFCQHDKTMLIGADPSHVGDRCVRVTIHHCFFNGTR 860
            TLSDFDDGLIDITR+STDITISRCHF QHDK MLIGADP+HVGDRC+RVTIHHCFFNGTR
Sbjct: 175  TLSDFDDGLIDITRESTDITISRCHFSQHDKAMLIGADPTHVGDRCMRVTIHHCFFNGTR 234

Query: 861  QRHPRVRFARVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEAGQKKLVFKYLTEKAADK 1040
            QR PRVRFA+VHLYNNY RNWGIYAVCASVESQIFSQHNIYEAGQKK+ FKYLTEKAADK
Sbjct: 235  QRQPRVRFAKVHLYNNYIRNWGIYAVCASVESQIFSQHNIYEAGQKKVAFKYLTEKAADK 294

Query: 1041 EAGATGHIRSEGDLFLNGAQPGLMTEDVGGNMFHPSEYQLTCTVEPPTDDLKHVLHRFTG 1220
            E GATG IRSEGD+FLNGAQ GLMTEDVG NMFHPSE+  + TVE PTDDLK +LH  TG
Sbjct: 295  EVGATGTIRSEGDIFLNGAQKGLMTEDVGCNMFHPSEHYPSWTVEAPTDDLKQILHHCTG 354

Query: 1221 WQSVARPADQTV 1256
            WQS+A+PADQT+
Sbjct: 355  WQSLAKPADQTL 366


>ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vitis vinifera]
          Length = 373

 Score =  554 bits (1428), Expect = e-155
 Identities = 274/378 (72%), Positives = 294/378 (77%), Gaps = 11/378 (2%)
 Frame = +3

Query: 162  MGNSH-----VHRKHRNSDPPPYKYGTSSTQP------QPPPCHNNNMLSLPYSHVDSTL 308
            MG +H      HRKH     P Y     +T P       P      NM  LPY+HVDS L
Sbjct: 1    MGGAHGRCSGTHRKHPT---PAYTTFPDTTAPASAFGRDPSNTVRTNMSCLPYAHVDSNL 57

Query: 309  RALAGQAEGFGRFAIGGLHGPLYHVTSLADDGPGSLRDACRRKEPLWIVFEVSGTIHXXX 488
            RALAGQAEGFGR AIGGLHGPLYHVT+LADDGPGSLRD CR+KEPLWIVFEVSG IH   
Sbjct: 58   RALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVFEVSGIIHLSS 117

Query: 489  XXXXXXXKTIDGRGQRIKLTGKGLRMKECEHVIVCNLELEGGKGPDADAIQIKPNSKHIW 668
                   KTIDGRGQRIKLTGKGLR+KECEHVI+CNLE EGG+GPD D IQIKPNSKHIW
Sbjct: 118  YLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSKHIW 177

Query: 669  IDRCTLSDFDDGLIDITRQSTDITISRCHFCQHDKTMLIGADPSHVGDRCVRVTIHHCFF 848
            IDRC+L DFDDGLIDITR STDITISRCHF QHDKTMLIGADPSH GDRC+RVTIHHCFF
Sbjct: 178  IDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIHHCFF 237

Query: 849  NGTRQRHPRVRFARVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEAGQKKLVFKYLTEK 1028
            +GTRQRHPRVR+ +VHLYNNYTRNWGIYAVCASVESQI+SQ NIYEAG KK+ FKYLTEK
Sbjct: 238  DGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKYLTEK 297

Query: 1029 AADKEAGATGHIRSEGDLFLNGAQPGLMTEDVGGNMFHPSEYQLTCTVEPPTDDLKHVLH 1208
            AADKE   TG +RSEGDLF+NG Q GLMT  V   MFHP E+  T TVE P+D LK VLH
Sbjct: 298  AADKEEERTGCLRSEGDLFINGTQAGLMT--VASEMFHPREFYPTWTVEAPSDALKQVLH 355

Query: 1209 RFTGWQSVARPADQTVCA 1262
              TGWQ V RPAD+   A
Sbjct: 356  HCTGWQCVPRPADEAAIA 373


>gb|ABK93648.1| unknown [Populus trichocarpa]
          Length = 386

 Score =  554 bits (1427), Expect = e-155
 Identities = 274/386 (70%), Positives = 305/386 (79%), Gaps = 18/386 (4%)
 Frame = +3

Query: 162  MGNSHVH---RKHRNSDPPPYKYGT----SSTQPQPPPCHNNNM-----------LSLPY 287
            MGNSH H   RK R++   P+   T    S++QP PP  +   +            +LPY
Sbjct: 1    MGNSHDHGHRRKFRDNGNVPFPDKTAAVPSASQPVPPFIYQPQIPTSSTRTPKMATALPY 60

Query: 288  SHVDSTLRALAGQAEGFGRFAIGGLHGPLYHVTSLADDGPGSLRDACRRKEPLWIVFEVS 467
             HVDS+LRALA QAEGFGR A GGLHGP+Y+VT+LADDGPGSLRD CR+KEPLWIVFEVS
Sbjct: 61   PHVDSSLRALAAQAEGFGRSANGGLHGPIYYVTTLADDGPGSLRDGCRKKEPLWIVFEVS 120

Query: 468  GTIHXXXXXXXXXXKTIDGRGQRIKLTGKGLRMKECEHVIVCNLELEGGKGPDADAIQIK 647
            GTI           KTIDGRGQRIKLTGKGLR+KECEHVI+CNLE EGG+GPD D IQIK
Sbjct: 121  GTIQLRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIK 180

Query: 648  PNSKHIWIDRCTLSDFDDGLIDITRQSTDITISRCHFCQHDKTMLIGADPSHVGDRCVRV 827
            P SKHIWIDRC+L D+DDGLIDITR+STDITISRC+F QHDKTMLIGADP+HVGDRC+RV
Sbjct: 181  PKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCYFGQHDKTMLIGADPTHVGDRCIRV 240

Query: 828  TIHHCFFNGTRQRHPRVRFARVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEAGQKKLV 1007
            TIHHCFF+GTRQRHPRVRF +VHLYNNYTRNWGIYAVCASVESQI+SQ NIYEAGQKK+ 
Sbjct: 241  TIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQSNIYEAGQKKIA 300

Query: 1008 FKYLTEKAADKEAGATGHIRSEGDLFLNGAQPGLMTEDVGGNMFHPSEYQLTCTVEPPTD 1187
            FKYL+EKAADKE   +G IRSEGDLF+ G Q GLMTED    MFHPSEY  T TVEPPTD
Sbjct: 301  FKYLSEKAADKEKARSGSIRSEGDLFVTGTQAGLMTEDGECCMFHPSEYYPTWTVEPPTD 360

Query: 1188 DLKHVLHRFTGWQSVARPADQTVCAE 1265
             LK VL   TGWQ V RPADQ + A+
Sbjct: 361  SLKQVLQHCTGWQCVPRPADQPLAAQ 386


>gb|ABK96132.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  552 bits (1422), Expect = e-154
 Identities = 273/389 (70%), Positives = 304/389 (78%), Gaps = 21/389 (5%)
 Frame = +3

Query: 162  MGNSHVH---RKHRNSD--PPPYKYGTSSTQPQPPP---------------CHNNNML-S 278
            MGNSH H   RK RN+   P P K  ++ +  QP P                H ++M  S
Sbjct: 1    MGNSHAHGHHRKFRNNGNVPSPDKTASAPSPSQPVPPSIYQPEHPLIPNSSIHASSMATS 60

Query: 279  LPYSHVDSTLRALAGQAEGFGRFAIGGLHGPLYHVTSLADDGPGSLRDACRRKEPLWIVF 458
            LPYSHVDS LRALA QAEGFGR AIGGLHGP+Y+VT+L DDGPGSLRD CR+KEPLWIVF
Sbjct: 61   LPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWIVF 120

Query: 459  EVSGTIHXXXXXXXXXXKTIDGRGQRIKLTGKGLRMKECEHVIVCNLELEGGKGPDADAI 638
            EVSGTI           KTIDGRGQRIKLTGKGLR+KECEHVI+CNLE EGG+GPD D I
Sbjct: 121  EVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGI 180

Query: 639  QIKPNSKHIWIDRCTLSDFDDGLIDITRQSTDITISRCHFCQHDKTMLIGADPSHVGDRC 818
            QIKP SKHIWIDRC+L D+DDGLIDI R+STDIT+SRCHF QHDKT+LIGADP+HVGDRC
Sbjct: 181  QIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGDRC 240

Query: 819  VRVTIHHCFFNGTRQRHPRVRFARVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEAGQK 998
            +RVTIHHCFF+GTRQRHPRVRF +VHLYNNY RNWGIYAVCASVESQI+SQ NIYEAGQK
Sbjct: 241  IRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAGQK 300

Query: 999  KLVFKYLTEKAADKEAGATGHIRSEGDLFLNGAQPGLMTEDVGGNMFHPSEYQLTCTVEP 1178
            K+ FKYL+EKAADKE  ++G IRSEGDLF+ GAQ GLM ED    MFHPSEY  T T+EP
Sbjct: 301  KIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMAEDGEFCMFHPSEYYPTWTIEP 360

Query: 1179 PTDDLKHVLHRFTGWQSVARPADQTVCAE 1265
            PTD LK VL   TGWQ V RPAD  + A+
Sbjct: 361  PTDSLKQVLQHCTGWQCVPRPADHPLAAQ 389


>emb|CBI32661.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  546 bits (1407), Expect = e-153
 Identities = 261/331 (78%), Positives = 279/331 (84%)
 Frame = +3

Query: 270  MLSLPYSHVDSTLRALAGQAEGFGRFAIGGLHGPLYHVTSLADDGPGSLRDACRRKEPLW 449
            M  LPY+HVDS LRALAGQAEGFGR AIGGLHGPLYHVT+LADDGPGSLRD CR+KEPLW
Sbjct: 1    MSCLPYAHVDSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLW 60

Query: 450  IVFEVSGTIHXXXXXXXXXXKTIDGRGQRIKLTGKGLRMKECEHVIVCNLELEGGKGPDA 629
            IVFEVSG IH          KTIDGRGQRIKLTGKGLR+KECEHVI+CNLE EGG+GPD 
Sbjct: 61   IVFEVSGIIHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDV 120

Query: 630  DAIQIKPNSKHIWIDRCTLSDFDDGLIDITRQSTDITISRCHFCQHDKTMLIGADPSHVG 809
            D IQIKPNSKHIWIDRC+L DFDDGLIDITR STDITISRCHF QHDKTMLIGADPSH G
Sbjct: 121  DGIQIKPNSKHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTG 180

Query: 810  DRCVRVTIHHCFFNGTRQRHPRVRFARVHLYNNYTRNWGIYAVCASVESQIFSQHNIYEA 989
            DRC+RVTIHHCFF+GTRQRHPRVR+ +VHLYNNYTRNWGIYAVCASVESQI+SQ NIYEA
Sbjct: 181  DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 990  GQKKLVFKYLTEKAADKEAGATGHIRSEGDLFLNGAQPGLMTEDVGGNMFHPSEYQLTCT 1169
            G KK+ FKYLTEKAADKE   TG +RSEGDLF+NG Q GLMT  V   MFHP E+  T T
Sbjct: 241  GHKKVAFKYLTEKAADKEEERTGCLRSEGDLFINGTQAGLMT--VASEMFHPREFYPTWT 298

Query: 1170 VEPPTDDLKHVLHRFTGWQSVARPADQTVCA 1262
            VE P+D LK VLH  TGWQ V RPAD+   A
Sbjct: 299  VEAPSDALKQVLHHCTGWQCVPRPADEAAIA 329


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