BLASTX nr result

ID: Glycyrrhiza24_contig00002974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002974
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   197   1e-48
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   184   8e-45
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]   181   9e-44

>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  204 bits (518), Expect = 1e-50
 Identities = 88/158 (55%), Positives = 120/158 (75%), Gaps = 5/158 (3%)
 Frame = -3

Query: 538 EAGESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQDSITVVSCPGLKCE 359
           EAGESSL  CEICAE K +++M ++  C HSFC +C+++HVATK+QD+I +V+CPGL C 
Sbjct: 93  EAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCR 152

Query: 358 GVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALILLDEGEEEIRESEC 179
            VLE+D CRP+L + +I+RW++ALCE ++  + +FYCPF+DC+AL++ D   E IRESEC
Sbjct: 153 AVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDDNEGETIRESEC 212

Query: 178 PFCHRLICARCHVPWHPEVPC-----XXXXERGRKNLL 80
           PFCHRL CA+C VPWHP V C         ERGR++L+
Sbjct: 213 PFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLM 250


>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  204 bits (518), Expect = 1e-50
 Identities = 88/158 (55%), Positives = 120/158 (75%), Gaps = 5/158 (3%)
 Frame = -3

Query: 538 EAGESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQDSITVVSCPGLKCE 359
           EAGESSL  CEICAE K +++M ++  C HSFC +C+++HVATK+QD+I +V+CPGL C 
Sbjct: 93  EAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLSCR 152

Query: 358 GVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALILLDEGEEEIRESEC 179
            VLE+D CRP+L + +I+RW++ALCE ++  + +FYCPF+DC+AL++ D   E IRESEC
Sbjct: 153 AVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDDNEGETIRESEC 212

Query: 178 PFCHRLICARCHVPWHPEVPC-----XXXXERGRKNLL 80
           PFCHRL CA+C VPWHP V C         ERGR++L+
Sbjct: 213 PFCHRLFCAQCSVPWHPGVDCDEYQRLNEDERGREDLM 250


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  197 bits (501), Expect = 1e-48
 Identities = 88/170 (51%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
 Frame = -3

Query: 574 VDVSPVVPETEEEAGESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQDS 395
           ++  PVVP +  E G+SS I CEIC E K +++M  +  C HSFC +CV K+V TKIQ+S
Sbjct: 84  IEPPPVVPNSPTETGQSSQIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQES 143

Query: 394 ITVVSCPGLKCEGVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALILL 215
            T+V+CPG+ C  VLELD CR  L K +I+ W++ALC+ ++ T   FYCPFRDC+AL++ 
Sbjct: 144 QTIVTCPGMNCRAVLELDICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLVN 203

Query: 214 DEGEEEIRESECPFCHRLICARCHVPWHPEVPC-----XXXXERGRKNLL 80
           D   E IRESECPFCHRL CA+C+VPWH  + C         ERGR++L+
Sbjct: 204 DNEGEVIRESECPFCHRLFCAQCYVPWHSGIECEAFQRLNEDERGREDLM 253


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  184 bits (468), Expect = 8e-45
 Identities = 79/154 (51%), Positives = 113/154 (73%)
 Frame = -3

Query: 577 AVDVSPVVPETEEEAGESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQD 398
           AVD++ V      E G++S   CEICAE +G +EM RS +C H+FC  C++KHVA KIQ+
Sbjct: 82  AVDMAVV------EEGQTSENFCEICAERRGLDEMFRSGKCCHTFCSYCISKHVAVKIQE 135

Query: 397 SITVVSCPGLKCEGVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALIL 218
           S+ +V+CP L CEGVLE+D CR ++ ++++E+W++  CE+++  + +FYCPFRDC+A+++
Sbjct: 136 SVRMVTCPALSCEGVLEVDDCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLV 195

Query: 217 LDEGEEEIRESECPFCHRLICARCHVPWHPEVPC 116
            D G E IRESECP C RL CA C+VPWH  V C
Sbjct: 196 DDNGGEVIRESECPVCRRLFCAACYVPWHSGVGC 229


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score =  181 bits (459), Expect = 9e-44
 Identities = 78/154 (50%), Positives = 112/154 (72%)
 Frame = -3

Query: 577 AVDVSPVVPETEEEAGESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQD 398
           AVD++ V      E G++S   CEICAE +  +EM RS +C H+FC  C++KHVA KIQ+
Sbjct: 46  AVDMAVV------EEGQTSENFCEICAEMREVDEMFRSGKCCHTFCSYCISKHVAVKIQE 99

Query: 397 SITVVSCPGLKCEGVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALIL 218
           S+ +V+CP L CEGVLE+D CR ++ ++++E+W++  CE+++  + +FYCPFRDC+A+++
Sbjct: 100 SVRMVTCPALXCEGVLEVDDCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCSAMLV 159

Query: 217 LDEGEEEIRESECPFCHRLICARCHVPWHPEVPC 116
            D G E IRESECP C RL CA C+VPWH  V C
Sbjct: 160 DDNGGEVIRESECPVCRRLFCAXCYVPWHSGVGC 193



 Score =  160 bits (404), Expect = 2e-37
 Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 13/176 (7%)
 Frame = -3

Query: 559  VVPETEEEAGESS------LIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKIQD 398
            V+ E+ ++ GE S        +CEIC E K S  M R+  C HS C +C++KHV  KI+ 
Sbjct: 565  VLGESGKKVGEPSQGRFRFYGMCEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIES 624

Query: 397  SITVVSCPGLKCEGVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDCAALIL 218
            +  ++ CPG+ C GVL+ + CR  LPK ++ERW+ A+ E L+L + KFYCPF+DC+A++L
Sbjct: 625  NSGMILCPGMDCRGVLDPERCRGFLPKTVVERWEXAIIETLILDSEKFYCPFKDCSAMLL 684

Query: 217  LDEGEE--EIRESECPFCHRLICARCHVPWHPEVPC-----XXXXERGRKNLLDQK 71
             D  E    +RESECP C RL C +C VPWH  + C         ERGR+++L +K
Sbjct: 685  NDNAEAVMMMRESECPHCRRLFCVQCRVPWHSGMECREVQRLNADERGREDMLLKK 740



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
 Frame = -3

Query: 532 GESSLIICEICAEPKGSEEMLRSHRCDHSFCWECVTKHVATKI---QDSITVVSCPGLKC 362
           GE S I+C +C +   SEE  R+  C HS+C +C++ +V  +I   + + ++  CP  KC
Sbjct: 443 GEPSKILCLLCMKSMESEETYRNSSCSHSYCIKCISMYVPLRIVLNKGTSSMFRCPAYKC 502

Query: 361 EGVLELDACRPMLPKDLIERWDDALCEALLLTAPKFYCPFRDC 233
           + +LEL     ++P  + +RW+ A  EAL + + K   PF DC
Sbjct: 503 KAILELSP--GIVPGPVFQRWNAAKYEALHIESKKNQSPFEDC 543


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