BLASTX nr result

ID: Glycyrrhiza24_contig00002938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002938
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237638.1| transcription factor [Glycine max] gi|166203...   270   7e-70
ref|XP_003526799.1| PREDICTED: probable WRKY transcription facto...   262   1e-67
gb|ACU19563.1| unknown [Glycine max]                                  262   1e-67
gb|AFK39788.1| unknown [Lotus japonicus]                              238   2e-60
ref|XP_003544261.1| PREDICTED: probable WRKY transcription facto...   217   7e-54

>ref|NP_001237638.1| transcription factor [Glycine max] gi|166203244|gb|ABY84662.1|
            transcription factor [Glycine max]
          Length = 317

 Score =  270 bits (690), Expect = 7e-70
 Identities = 186/343 (54%), Positives = 215/343 (62%), Gaps = 19/343 (5%)
 Frame = -2

Query: 1243 KRKRVIRELVKGREYATQLNHFLLHRQNPTAAAVGSPSAKELVTNVLRSFADTLSVLTSS 1064
            KRKRVIRELV+GR+YATQL   L     P     GS SAKELV NVLRSF +TLSVLTSS
Sbjct: 13   KRKRVIRELVQGRDYATQLKFLLQKPIGPD----GSVSAKELVANVLRSFTETLSVLTSS 68

Query: 1063 EAG----------------TGSNDNPXXXXXXXXXXXRLLPAPTKDRRGSYKRRKTEQTW 932
            E                  +G + +                  +KDRRGSYKRRKTEQTW
Sbjct: 69   EVAISGDHHRDEVAQNLVISGEDASQVESIDPRSEGSTESKKGSKDRRGSYKRRKTEQTW 128

Query: 931  TKVSHTTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYEQGCRATRQVQRIQENPAKYQI 752
            T V+  TTDDNHAWRKYGQKEILNSQFPRSYFRCTRK+EQGCRAT+QVQRIQENP  Y I
Sbjct: 129  TIVAQ-TTDDNHAWRKYGQKEILNSQFPRSYFRCTRKFEQGCRATKQVQRIQENPDMYTI 187

Query: 751  TYIGFHTCKPTTTTLEEAPQAQMVTYNSDTTSCWDSFDLVNSQPDESKITSPTESQDPPQ 572
            TYIGFHTCK T     +AP  QMVT+    +  WDSF      PD + + +  +S    Q
Sbjct: 188  TYIGFHTCKDTL----KAP--QMVTH----SETWDSF----LGPDANDVPNEHDSTIGSQ 233

Query: 571  SSLSIKQEYPNDDRTTSPSDLITDNLLDPNLWSDYLKDFELS--KPPAINIRFKMASHDN 398
             SL +KQEYPND+  T PSD     L D N WSD+ KDFELS  KP  +    K+AS + 
Sbjct: 234  -SLIVKQEYPNDE--TDPSD-----LTDANFWSDF-KDFELSNDKPAGL----KIASEN- 279

Query: 397  IADTVYSSCCTDHDDHSQNLHEMDHFGVFSSDPHF-TTDFIHF 272
             ADTVYS  CT     S++L +MD FG+FSS  HF +T+  HF
Sbjct: 280  -ADTVYS--CTG----SRSL-DMD-FGIFSS--HFCSTEDFHF 311


>ref|XP_003526799.1| PREDICTED: probable WRKY transcription factor 70-like [Glycine max]
          Length = 319

 Score =  262 bits (670), Expect = 1e-67
 Identities = 186/346 (53%), Positives = 215/346 (62%), Gaps = 22/346 (6%)
 Frame = -2

Query: 1243 KRKRVIRELVKGREYATQLNHFLLHRQNPTAAAVGSPSAKELVTNVLRSFADTLSVLTSS 1064
            KRKRVIRELV+GR+YATQL   L     P     GS SAKELV NVLRSFA+TLSVLTSS
Sbjct: 13   KRKRVIRELVQGRDYATQLKFLLQKPIGPD----GSVSAKELVANVLRSFAETLSVLTSS 68

Query: 1063 -EAGTGSNDNPXXXXXXXXXXXRLLPAP------------------TKDRRGSYKRRKTE 941
             E  T  +D+                +                   +KDRRGSYKRRKTE
Sbjct: 69   SEDSTSGHDHDDEVIAQNLVISGEDASQVASINDPSSEDSTESRKGSKDRRGSYKRRKTE 128

Query: 940  QTWTKVSHTTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYEQGCRATRQVQRIQENPAK 761
            QTWT V+ TT DDNHAWRKYGQKEILNSQFPRSYFRCTRK+EQGCRAT+QVQRIQENP +
Sbjct: 129  QTWTIVAQTT-DDNHAWRKYGQKEILNSQFPRSYFRCTRKFEQGCRATKQVQRIQENPDR 187

Query: 760  YQITYIGFHTCKPTTTTLEEAPQAQMVTYNSDTTSCWDSFDLVNSQPDESKITSPTESQD 581
            Y ITYIGFHTCK T     +AP  Q+VT+    +  WDSF        ES + +   S  
Sbjct: 188  YNITYIGFHTCKDTL----KAP--QVVTH----SKTWDSF-----LGPESNVPNEHYSTI 232

Query: 580  PPQSSLSIKQEYPNDDRTTSPSDLITDNLLDPNLWSDYLKDFELS--KPPAINIRFKMAS 407
              QS + I QEYPND+  T PSD     L D NLWSD LKDFELS  KP  + I     +
Sbjct: 233  GSQSQIVI-QEYPNDE--TDPSD-----LTDANLWSD-LKDFELSNDKPAGLKI-----A 278

Query: 406  HDNIADTVYSSCCTDHDDHSQNLHEMDHFGVFSSDPHF-TTDFIHF 272
             +N AD+VYS  CT     S++L +MD FG+FS  PHF +T+  HF
Sbjct: 279  PEN-ADSVYS--CTG----SRSL-DMD-FGIFS--PHFCSTEDFHF 313


>gb|ACU19563.1| unknown [Glycine max]
          Length = 319

 Score =  262 bits (670), Expect = 1e-67
 Identities = 186/346 (53%), Positives = 215/346 (62%), Gaps = 22/346 (6%)
 Frame = -2

Query: 1243 KRKRVIRELVKGREYATQLNHFLLHRQNPTAAAVGSPSAKELVTNVLRSFADTLSVLTSS 1064
            KRKRVIRELV+GR+YATQL   L     P     GS SAKELV NVLRSFA+TLSVLTSS
Sbjct: 13   KRKRVIRELVQGRDYATQLKFLLQKPIGPD----GSVSAKELVANVLRSFAETLSVLTSS 68

Query: 1063 -EAGTGSNDNPXXXXXXXXXXXRLLPAP------------------TKDRRGSYKRRKTE 941
             E  T  +D+                +                   +KDRRGSYKRRKTE
Sbjct: 69   SEDSTSGHDHDDGVIAQNLVISGEDASQVASINDPSSEDSTESRKGSKDRRGSYKRRKTE 128

Query: 940  QTWTKVSHTTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYEQGCRATRQVQRIQENPAK 761
            QTWT V+ TT DDNHAWRKYGQKEILNSQFPRSYFRCTRK+EQGCRAT+QVQRIQENP +
Sbjct: 129  QTWTIVAQTT-DDNHAWRKYGQKEILNSQFPRSYFRCTRKFEQGCRATKQVQRIQENPDR 187

Query: 760  YQITYIGFHTCKPTTTTLEEAPQAQMVTYNSDTTSCWDSFDLVNSQPDESKITSPTESQD 581
            Y ITYIGFHTCK T     +AP  Q+VT+    +  WDSF        ES + +   S  
Sbjct: 188  YNITYIGFHTCKDTL----KAP--QVVTH----SKTWDSF-----LGPESNVPNEHYSTI 232

Query: 580  PPQSSLSIKQEYPNDDRTTSPSDLITDNLLDPNLWSDYLKDFELS--KPPAINIRFKMAS 407
              QS + I QEYPND+  T PSD     L D NLWSD LKDFELS  KP  + I     +
Sbjct: 233  GSQSQIVI-QEYPNDE--TDPSD-----LTDANLWSD-LKDFELSNDKPAGLKI-----A 278

Query: 406  HDNIADTVYSSCCTDHDDHSQNLHEMDHFGVFSSDPHF-TTDFIHF 272
             +N AD+VYS  CT     S++L +MD FG+FS  PHF +T+  HF
Sbjct: 279  PEN-ADSVYS--CTG----SRSL-DMD-FGIFS--PHFCSTEDFHF 313


>gb|AFK39788.1| unknown [Lotus japonicus]
          Length = 312

 Score =  238 bits (608), Expect = 2e-60
 Identities = 173/351 (49%), Positives = 204/351 (58%), Gaps = 27/351 (7%)
 Frame = -2

Query: 1243 KRKRVIRELVKGREYATQLNHFLLHRQNPTAAAVGSPSAKELVTNVLRSFADTLSVLT-- 1070
            KRK+VIRELVKGRE+ATQL  FLL   N      GS SAKE+  +VLRSF+ +LSV+T  
Sbjct: 13   KRKQVIRELVKGREHATQLK-FLLQNLNG-----GSLSAKEMAASVLRSFSVSLSVITSD 66

Query: 1069 --SSEAGTG-----------------------SNDNPXXXXXXXXXXXRLLPAPTKDRRG 965
              S EAG+G                       ++ N            R+    TKDRRG
Sbjct: 67   SLSEEAGSGGGGEVADQNHSEDGSLVMAAAAAASSNIGPEDSSESCGKRIFVQATKDRRG 126

Query: 964  SYKRRKTEQTWTKVSHTTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYEQGCRATRQVQ 785
            SYKRRK+EQT T VS  TTDD+H+WRKYGQK+ILNSQFPRSYFRCTRK++QGCRA +QVQ
Sbjct: 127  SYKRRKSEQTRTIVS-PTTDDDHSWRKYGQKDILNSQFPRSYFRCTRKHDQGCRANKQVQ 185

Query: 784  RIQENPAKYQITYIGFHTCKPTTTTLEEAPQAQMVTYNSDTTSCWDSFDLVNSQPDESKI 605
            RIQENP  YQITYIGFHTCK T     +AP  +MVT+    ++ WDSF LVNS PD +  
Sbjct: 186  RIQENPDMYQITYIGFHTCKDTPI---KAP--EMVTF----SNTWDSF-LVNSHPDSN-- 233

Query: 604  TSPTESQDPPQSSLSIKQEYPNDDRTTSPSDLITDNLLDPNLWSDYLKDFELSKPPAINI 425
                E  DP      IK E P    T  PSD +T N LD +LWS+ LKDFELSKP     
Sbjct: 234  ----EHHDP-----IIKLECPCSGET--PSD-VTGNNLDHSLWSE-LKDFELSKP----- 275

Query: 424  RFKMASHDNIADTVYSSCCTDHDDHSQNLHEMDHFGVFSSDPHFTTDFIHF 272
                      ++ + SS     D           FGV SS  HF+TDF HF
Sbjct: 276  ----------SNIIPSSSAVHMD-----------FGVLSS--HFSTDF-HF 302


>ref|XP_003544261.1| PREDICTED: probable WRKY transcription factor 70-like [Glycine max]
          Length = 329

 Score =  217 bits (552), Expect = 7e-54
 Identities = 149/347 (42%), Positives = 188/347 (54%), Gaps = 13/347 (3%)
 Frame = -2

Query: 1273 EKESVIEWGNKRKRVI-RELVKGREYATQLNHFLLHRQNPTAAAVGSPSAKELVTNVLRS 1097
            E ES I    K KR+I +ELVKG+E ATQL   L   + P  +  GS S +EL  NVLRS
Sbjct: 8    ESESEISISAKNKRMIMKELVKGQESATQLKVLL---EKPFGSE-GSLSCQELTANVLRS 63

Query: 1096 FADTLSVLTSSEA---------GTGSNDNPXXXXXXXXXXXRLLPAPTKDRRGSYKRRKT 944
            F   +S++ SS A          +G N +P                  K RRG Y RRK 
Sbjct: 64   FTQAISIINSSSADEVAHRSLLNSGQNGSPVAVSGENRSQ--------KGRRGRYNRRKN 115

Query: 943  EQTWTKVSHTTTDDNHAWRKYGQKEILNSQFPRSYFRCTRKYEQGCRATRQVQRIQENPA 764
              TWT +S  TTDDNHAWRKYGQK ILNS+FPRSYFRC+ KY+QGCRA +QVQ  QENP 
Sbjct: 116  ALTWTILS-CTTDDNHAWRKYGQKRILNSEFPRSYFRCSHKYDQGCRAIKQVQVDQENPN 174

Query: 763  KYQITYIGFHTCKPTTTTLEEAPQAQMVTYNSDTTSCWDSFDLVNSQPDESKITSPTESQ 584
              Q TYIG HTC  T       P A      S +T  W+S  L+N    +SK+ +  +  
Sbjct: 175  MLQTTYIGIHTCNGT-------PMATHSAIGSSSTE-WESSYLLNFDHHDSKVPN-VQDH 225

Query: 583  DPPQSSLSIKQEYPNDDRTTSPSDLITDNLLDPNLWSDYLKDFELSKPPAINIRFKMASH 404
                 +L+IKQE+P +D   + SD+      DPNLWSD LKDF+  KP  +  R +  ++
Sbjct: 226  HISSPNLTIKQEFPKED---THSDVADHKYSDPNLWSD-LKDFQPFKPTIMPFRMESDNN 281

Query: 403  DN---IADTVYSSCCTDHDDHSQNLHEMDHFGVFSSDPHFTTDFIHF 272
            +N    AD V+SS CTD+   + N           +  HF TDF HF
Sbjct: 282  NNNNTNADNVHSS-CTDYQRLNMNFE--------MASVHFDTDF-HF 318


Top