BLASTX nr result

ID: Glycyrrhiza24_contig00002930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002930
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41594.1| unknown [Medicago truncatula]                          197   1e-48
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   196   4e-48
ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycin...   194   9e-48
ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like prote...   194   1e-47
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   194   2e-47

>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  197 bits (501), Expect = 1e-48
 Identities = 98/99 (98%), Positives = 99/99 (100%)
 Frame = -2

Query: 527 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 348
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 347 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 231
           TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  196 bits (497), Expect = 4e-48
 Identities = 97/99 (97%), Positives = 99/99 (100%)
 Frame = -2

Query: 527 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 348
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 347 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 231
           TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPFIQPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99


>ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
           gi|255628715|gb|ACU14702.1| unknown [Glycine max]
          Length = 99

 Score =  194 bits (494), Expect = 9e-48
 Identities = 96/99 (96%), Positives = 99/99 (100%)
 Frame = -2

Query: 527 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 348
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 347 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 231
           TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS 99


>ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449463765|ref|XP_004149602.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
           gi|449530742|ref|XP_004172352.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 1
           [Cucumis sativus] gi|449530744|ref|XP_004172353.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Cucumis sativus]
          Length = 99

 Score =  194 bits (493), Expect = 1e-47
 Identities = 97/99 (97%), Positives = 97/99 (97%)
 Frame = -2

Query: 527 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 348
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 347 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 231
           TDQTR LGLIVCRGTAVMLVSP DGTDEIANPFIQPDGA
Sbjct: 61  TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  194 bits (492), Expect = 2e-47
 Identities = 97/99 (97%), Positives = 97/99 (97%)
 Frame = -2

Query: 527 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 348
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDP KT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKT 60

Query: 347 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 231
           TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99


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