BLASTX nr result

ID: Glycyrrhiza24_contig00002928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002928
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycin...   295   4e-84
ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycin...   293   2e-83
ref|XP_003556523.1| PREDICTED: 60S ribosomal protein L18-3-like ...   292   3e-83
ref|NP_001237789.1| uncharacterized protein LOC100500164 [Glycin...   291   5e-83
ref|XP_002320999.1| predicted protein [Populus trichocarpa] gi|1...   293   7e-83

>ref|NP_001236071.1| uncharacterized protein LOC100499789 [Glycine max]
           gi|255626631|gb|ACU13660.1| unknown [Glycine max]
          Length = 187

 Score =  295 bits (756), Expect(2) = 4e-84
 Identities = 151/156 (96%), Positives = 153/156 (98%)
 Frame = +1

Query: 46  MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNRP 225
           MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVN+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 226 PLSLSRLIRYMKGKEGKIAVVVGTVTDDIRVHEVPALKVTALRFTETARARIEKAGGECL 405
           PLSLSRLIRY KGKE KIAVVVG VTDDIRV+EVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIRYAKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 406 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 513
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 156



 Score = 43.1 bits (100), Expect(2) = 4e-84
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 576 VPHSHTKPYVRAKGRKFE 629
           VPHSHTKPYVRAKGRKFE
Sbjct: 157 VPHSHTKPYVRAKGRKFE 174


>ref|NP_001236701.1| uncharacterized protein LOC100306301 [Glycine max]
           gi|255628147|gb|ACU14418.1| unknown [Glycine max]
          Length = 187

 Score =  293 bits (750), Expect(2) = 2e-83
 Identities = 149/156 (95%), Positives = 153/156 (98%)
 Frame = +1

Query: 46  MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNRP 225
           MGIDLKAGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVN+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKP 60

Query: 226 PLSLSRLIRYMKGKEGKIAVVVGTVTDDIRVHEVPALKVTALRFTETARARIEKAGGECL 405
           PLSLSRLIRY KGKE KIAVVVG VTDDIRV+EVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 406 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 513
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 156



 Score = 43.1 bits (100), Expect(2) = 2e-83
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 576 VPHSHTKPYVRAKGRKFE 629
           VPHSHTKPYVRAKGRKFE
Sbjct: 157 VPHSHTKPYVRAKGRKFE 174


>ref|XP_003556523.1| PREDICTED: 60S ribosomal protein L18-3-like [Glycine max]
          Length = 187

 Score =  292 bits (748), Expect(2) = 3e-83
 Identities = 148/156 (94%), Positives = 153/156 (98%)
 Frame = +1

Query: 46  MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNRP 225
           MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVN+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 226 PLSLSRLIRYMKGKEGKIAVVVGTVTDDIRVHEVPALKVTALRFTETARARIEKAGGECL 405
           PLSLSRLI+Y KGKE KIAVVVG++TDDIRV+EVP LKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIKYTKGKEDKIAVVVGSITDDIRVYEVPPLKVTALRFTETARARIEKAGGECL 120

Query: 406 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 513
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 156



 Score = 43.1 bits (100), Expect(2) = 3e-83
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 576 VPHSHTKPYVRAKGRKFE 629
           VPHSHTKPYVRAKGRKFE
Sbjct: 157 VPHSHTKPYVRAKGRKFE 174


>ref|NP_001237789.1| uncharacterized protein LOC100500164 [Glycine max]
           gi|255629506|gb|ACU15099.1| unknown [Glycine max]
          Length = 187

 Score =  291 bits (746), Expect(2) = 5e-83
 Identities = 148/156 (94%), Positives = 152/156 (97%)
 Frame = +1

Query: 46  MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNRP 225
           MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVN+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 226 PLSLSRLIRYMKGKEGKIAVVVGTVTDDIRVHEVPALKVTALRFTETARARIEKAGGECL 405
           PLSLSRLI+Y KGKE KIAVVVG +TDDIRV+EVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIKYTKGKEDKIAVVVGNITDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 406 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 513
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 156



 Score = 43.1 bits (100), Expect(2) = 5e-83
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 576 VPHSHTKPYVRAKGRKFE 629
           VPHSHTKPYVRAKGRKFE
Sbjct: 157 VPHSHTKPYVRAKGRKFE 174


>ref|XP_002320999.1| predicted protein [Populus trichocarpa] gi|118483859|gb|ABK93820.1|
           unknown [Populus trichocarpa]
           gi|222861772|gb|EEE99314.1| predicted protein [Populus
           trichocarpa]
          Length = 187

 Score =  293 bits (749), Expect(2) = 7e-83
 Identities = 148/156 (94%), Positives = 153/156 (98%)
 Frame = +1

Query: 46  MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNRP 225
           MGIDLKAGGKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSK N+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 60

Query: 226 PLSLSRLIRYMKGKEGKIAVVVGTVTDDIRVHEVPALKVTALRFTETARARIEKAGGECL 405
           PL+LSRLI YMKGKEGKIAVVVGT+TDDIRV+EVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLALSRLITYMKGKEGKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 406 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 513
           TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPG 156



 Score = 41.6 bits (96), Expect(2) = 7e-83
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +3

Query: 576 VPHSHTKPYVRAKGRKFE 629
           VPHSHTKPY+R+KGRKFE
Sbjct: 157 VPHSHTKPYIRSKGRKFE 174


Top