BLASTX nr result

ID: Glycyrrhiza24_contig00002907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002907
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycin...   201   4e-49
ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782...   201   5e-49
gb|ACU17178.1| unknown [Glycine max]                                  201   5e-49
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...   188   3e-45
ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-45

>ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
           gi|255645259|gb|ACU23127.1| unknown [Glycine max]
          Length = 275

 Score =  201 bits (512), Expect = 4e-49
 Identities = 101/123 (82%), Positives = 114/123 (92%), Gaps = 3/123 (2%)
 Frame = +1

Query: 76  MAFLNKLGNILRQSANRQICSELRSSPSVFQAIRCMSSS---KLFIGGVSYATDEQSLRE 246
           MAF  ++GN+LRQ+A+RQ+ S+LRS PS FQAIRCMSS+   KLFIGGVSY+TDEQSLRE
Sbjct: 1   MAFFGRIGNLLRQTASRQVSSKLRSPPSFFQAIRCMSSAPSTKLFIGGVSYSTDEQSLRE 60

Query: 247 AFSKYGEVVDARIIMDRETGRSRGFGFITYSSVEEASSAIQALDGQDLHGRRVKVNYAND 426
           AFSKYGEVVDARIIMDRETGRSRGFGFITY+SVEEASSAIQALDGQDLHGR ++VNYAN+
Sbjct: 61  AFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE 120

Query: 427 RPR 435
           RPR
Sbjct: 121 RPR 123


>ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
          Length = 274

 Score =  201 bits (511), Expect = 5e-49
 Identities = 102/123 (82%), Positives = 114/123 (92%), Gaps = 3/123 (2%)
 Frame = +1

Query: 76  MAFLNKLGNILRQSANRQICSELRSSPSVFQAIRCMSSS---KLFIGGVSYATDEQSLRE 246
           MAF  ++GN+LRQ+A+RQ+ SELRSSPS FQAIR MSS+   KLFIGGVSY+TDEQSLRE
Sbjct: 1   MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLRE 60

Query: 247 AFSKYGEVVDARIIMDRETGRSRGFGFITYSSVEEASSAIQALDGQDLHGRRVKVNYAND 426
           AFSKYGEVVDARIIMDRETGRSRGFGFITY+SVEEASSAIQALDGQDLHGR ++VNYAN+
Sbjct: 61  AFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE 120

Query: 427 RPR 435
           RPR
Sbjct: 121 RPR 123


>gb|ACU17178.1| unknown [Glycine max]
          Length = 196

 Score =  201 bits (511), Expect = 5e-49
 Identities = 102/123 (82%), Positives = 114/123 (92%), Gaps = 3/123 (2%)
 Frame = +1

Query: 76  MAFLNKLGNILRQSANRQICSELRSSPSVFQAIRCMSSS---KLFIGGVSYATDEQSLRE 246
           MAF  ++GN+LRQ+A+RQ+ SELRSSPS FQAIR MSS+   KLFIGGVSY+TDEQSLRE
Sbjct: 1   MAFFGRIGNLLRQTASRQVSSELRSSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLRE 60

Query: 247 AFSKYGEVVDARIIMDRETGRSRGFGFITYSSVEEASSAIQALDGQDLHGRRVKVNYAND 426
           AFSKYGEVVDARIIMDRETGRSRGFGFITY+SVEEASSAIQALDGQDLHGR ++VNYAN+
Sbjct: 61  AFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANE 120

Query: 427 RPR 435
           RPR
Sbjct: 121 RPR 123


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score =  188 bits (478), Expect = 3e-45
 Identities = 92/121 (76%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
 Frame = +1

Query: 76  MAFLNKLGNILRQSANRQICSELRSS-PSVFQAIRCMSSSKLFIGGVSYATDEQSLREAF 252
           MAFL+K+GN+LRQ+A +QI +EL +S PS+FQAIR MSSSK+F+GG+SY TD+ SLREAF
Sbjct: 1   MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAF 60

Query: 253 SKYGEVVDARIIMDRETGRSRGFGFITYSSVEEASSAIQALDGQDLHGRRVKVNYANDRP 432
            KYGEV++AR+I+DRETGRSRGF F+TY+S EEASSAIQALDGQDLHGRRV+VNYANDRP
Sbjct: 61  GKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRP 120

Query: 433 R 435
           R
Sbjct: 121 R 121


>ref|XP_002318570.1| predicted protein [Populus trichocarpa] gi|222859243|gb|EEE96790.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  188 bits (477), Expect = 4e-45
 Identities = 90/121 (74%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
 Frame = +1

Query: 76  MAFLNKLGNILRQSANRQICSELRSS-PSVFQAIRCMSSSKLFIGGVSYATDEQSLREAF 252
           MAFL K+GN+LRQ+A+RQ+ SE+ +S PS++QA+RCMSSSKLF+GG+S+ TD+ SL+EAF
Sbjct: 1   MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAF 60

Query: 253 SKYGEVVDARIIMDRETGRSRGFGFITYSSVEEASSAIQALDGQDLHGRRVKVNYANDRP 432
            KYG VV+ARIIMDRETGRSRGFGF+TY+S EEASSAIQALDGQDLHGRRV+VNYA +RP
Sbjct: 61  DKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATERP 120

Query: 433 R 435
           +
Sbjct: 121 Q 121


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