BLASTX nr result

ID: Glycyrrhiza24_contig00002883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002883
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47194.1| unknown [Medicago truncatula]                          416   e-114
ref|XP_003611666.1| R2R3-MYB transcription factor [Medicago trun...   407   e-111
ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max...   405   e-110
gb|AFK46950.1| unknown [Medicago truncatula]                          404   e-110
ref|NP_001238087.1| MYB transcription factor MYB50 [Glycine max]...   402   e-109

>gb|AFK47194.1| unknown [Medicago truncatula]
          Length = 326

 Score =  416 bits (1070), Expect = e-114
 Identities = 226/324 (69%), Positives = 243/324 (75%), Gaps = 10/324 (3%)
 Frame = +3

Query: 162  NTAVTRKEMDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS 341
            NT + RKEMDRIKGPWSPEEDEALQKLVEKHGPRNWS+ISKSIPGRSGKSCRLRWCNQLS
Sbjct: 3    NTVINRKEMDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLS 62

Query: 342  PQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMID 521
            PQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC+SIMID
Sbjct: 63   PQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMID 122

Query: 522  DAQ--PLKRSVSAGAAIPVCTGLYMN---PPTXXXXXXXXXXXXXXXXXXXXXXFRPVP- 683
            D++  PLKRSVSAGAAIPV TGLY+N   P +                      +RPVP 
Sbjct: 123  DSESPPLKRSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPT 182

Query: 684  RTGAVLPPVETT--SSSNDPPTSLSLSLP--GVESSPEVSNRVTVTEPSTHVXXXXXXXX 851
            RT A LP VETT  S+SNDPPTSLSLSLP  GV+SS E SNRVT    +           
Sbjct: 183  RTVAPLPLVETTSPSNSNDPPTSLSLSLPGVGVDSSSEDSNRVTEPVNTASPPPPPPPPS 242

Query: 852  XXXXXXXMTAAAPIAVAQQFHDPSGSVSFNFSAELLTVMQDMIRKEVRSYMAGLEQQNGM 1031
                   MT A P+ +A         + F+FSAELL+VMQ+MIR EVRSYMAGLEQQNGM
Sbjct: 243  AIPLMPVMTTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGM 302

Query: 1032 CFQSAEDGFRNAAVKRIGISRIDS 1103
            CFQ AEDG RNA VKRIGIS IDS
Sbjct: 303  CFQKAEDGIRNALVKRIGISGIDS 326


>ref|XP_003611666.1| R2R3-MYB transcription factor [Medicago truncatula]
            gi|355513001|gb|AES94624.1| R2R3-MYB transcription factor
            [Medicago truncatula]
          Length = 316

 Score =  407 bits (1047), Expect = e-111
 Identities = 222/316 (70%), Positives = 238/316 (75%), Gaps = 10/316 (3%)
 Frame = +3

Query: 186  MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 365
            MDRIKGPWSPEEDEALQKLVEKHGPRNWS+ISKSIPGRSGKSCRLRWCNQLSPQVEHRAF
Sbjct: 1    MDRIKGPWSPEEDEALQKLVEKHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 366  TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMIDDAQ--PLK 539
            TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC+SIMIDD++  PLK
Sbjct: 61   TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDSESPPLK 120

Query: 540  RSVSAGAAIPVCTGLYMN---PPTXXXXXXXXXXXXXXXXXXXXXXFRPVP-RTGAVLPP 707
            RSVSAGAAIPV TGLY+N   P +                      +RPVP RT A LP 
Sbjct: 121  RSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPTRTVAPLPL 180

Query: 708  VETT--SSSNDPPTSLSLSLP--GVESSPEVSNRVTVTEPSTHVXXXXXXXXXXXXXXXM 875
            VETT  S+SNDPPTSLSLSLP  GV+SS E SNRVT    +                  M
Sbjct: 181  VETTSPSNSNDPPTSLSLSLPGVGVDSSSEDSNRVTEPVNTAPPPPPPPPPSAIPLMPVM 240

Query: 876  TAAAPIAVAQQFHDPSGSVSFNFSAELLTVMQDMIRKEVRSYMAGLEQQNGMCFQSAEDG 1055
            T A P+ +A         + F+FSAELL+VMQ+MIR EVRSYMAGLEQQNGMCFQ AEDG
Sbjct: 241  TTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAEDG 300

Query: 1056 FRNAAVKRIGISRIDS 1103
             RNA VKRIGISRIDS
Sbjct: 301  IRNALVKRIGISRIDS 316


>ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max]
            gi|110931706|gb|ABH02852.1| MYB transcription factor
            MYB112 [Glycine max]
          Length = 305

 Score =  405 bits (1042), Expect = e-110
 Identities = 222/311 (71%), Positives = 233/311 (74%), Gaps = 5/311 (1%)
 Frame = +3

Query: 186  MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 365
            MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF
Sbjct: 1    MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 366  TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMIDD--AQPLK 539
            T EEDDTIIRAHARFGNKWATIARLL GRTDNAIKNHWNSTLKRKC S MIDD    PLK
Sbjct: 61   THEEDDTIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCTSTMIDDDNTPPLK 120

Query: 540  RSVSAGAAIPVCTGLYMNPPTXXXXXXXXXXXXXXXXXXXXXXFRPVPRTGAVLPPVETT 719
            RS+SAGAAIPV TGLYMNPPT                      FRPVPRTGAVLPPVETT
Sbjct: 121  RSLSAGAAIPVSTGLYMNPPTPGSPSGSDVSESSVLVASSSHVFRPVPRTGAVLPPVETT 180

Query: 720  S--SSNDPPTSLSLSLPGVESSPEVSNRVTVTEPSTHVXXXXXXXXXXXXXXXMTAAAPI 893
            +  SSNDPPTSLSLSLPGV+SS EVSNR   TEP  H                +     +
Sbjct: 181  TTLSSNDPPTSLSLSLPGVDSS-EVSNR--TTEP-IHAAPPPPPQPQPQPLNTIPLLPMM 236

Query: 894  AVAQQFHDPSGSVSFNFSAELLTVMQDMIRKEVRSYMAGLEQQNGMCFQSA-EDGFRNAA 1070
             V      P+G   FNFSAE L VMQ+MIRKEVRSYM    Q+NGMCFQ+A  DGFRNA+
Sbjct: 237  TVPSV--SPTGMAPFNFSAEFLAVMQEMIRKEVRSYMELHNQKNGMCFQAAVNDGFRNAS 294

Query: 1071 VKRIGISRIDS 1103
            VKRIGISR+DS
Sbjct: 295  VKRIGISRVDS 305


>gb|AFK46950.1| unknown [Medicago truncatula]
          Length = 316

 Score =  404 bits (1039), Expect = e-110
 Identities = 221/316 (69%), Positives = 237/316 (75%), Gaps = 10/316 (3%)
 Frame = +3

Query: 186  MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 365
            MDRIKGPWSPEEDEALQKLVEK GPRNWS+ISKSIPGRSGKSCRLRWCNQLSPQVEHRAF
Sbjct: 1    MDRIKGPWSPEEDEALQKLVEKRGPRNWSIISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 366  TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMIDDAQ--PLK 539
            TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC+SIMIDD++  PLK
Sbjct: 61   TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMIDDSESPPLK 120

Query: 540  RSVSAGAAIPVCTGLYMN---PPTXXXXXXXXXXXXXXXXXXXXXXFRPVP-RTGAVLPP 707
            RSVSAGAAIPV TGLY+N   P +                      +RPVP RT A LP 
Sbjct: 121  RSVSAGAAIPVSTGLYINANSPGSPSGSDVSESSVPIVNTHVNSHVYRPVPTRTVAPLPL 180

Query: 708  VETT--SSSNDPPTSLSLSLP--GVESSPEVSNRVTVTEPSTHVXXXXXXXXXXXXXXXM 875
            VETT  S+SNDPPTSLSLSLP  GV+SS E SNRVT    +                  M
Sbjct: 181  VETTSPSNSNDPPTSLSLSLPGVGVDSSSEDSNRVTEPVNTAPPPPPPPPPSAIPLMPVM 240

Query: 876  TAAAPIAVAQQFHDPSGSVSFNFSAELLTVMQDMIRKEVRSYMAGLEQQNGMCFQSAEDG 1055
            T A P+ +A         + F+FSAELL+VMQ+MIR EVRSYMAGLEQQNGMCFQ AEDG
Sbjct: 241  TTAVPVPMAVPMQQSGSVMPFSFSAELLSVMQEMIRTEVRSYMAGLEQQNGMCFQKAEDG 300

Query: 1056 FRNAAVKRIGISRIDS 1103
             RNA VKRIGISRIDS
Sbjct: 301  IRNALVKRIGISRIDS 316


>ref|NP_001238087.1| MYB transcription factor MYB50 [Glycine max]
            gi|110931650|gb|ABH02824.1| MYB transcription factor
            MYB50 [Glycine max]
          Length = 297

 Score =  402 bits (1032), Expect = e-109
 Identities = 220/310 (70%), Positives = 230/310 (74%), Gaps = 4/310 (1%)
 Frame = +3

Query: 186  MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 365
            MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF
Sbjct: 1    MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 366  TPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMIDD-AQPLKR 542
            T EEDDTIIRAHARFGNKWATIARLL GRTDNAIKNHWNSTLKRKC+S MIDD  QPLKR
Sbjct: 61   TAEEDDTIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCSSTMIDDNTQPLKR 120

Query: 543  SVSAGAAIPVCTGLYMNPPTXXXXXXXXXXXXXXXXXXXXXXFRPVPRTGAVLPPVETTS 722
            SVSAGAAIPV TGLYMNPPT                      FRPVPRT  VLPPVETTS
Sbjct: 121  SVSAGAAIPVSTGLYMNPPTPGSPSGSDVSESSLPVASSSHVFRPVPRTVKVLPPVETTS 180

Query: 723  SSNDPPTSLSLSLP--GVESSPEVSNRVTVTEPSTHVXXXXXXXXXXXXXXXMTAAAPIA 896
            SSNDPPTSLSLSLP  GV  S EVSNR   TEP                   MT+ +   
Sbjct: 181  SSNDPPTSLSLSLPGVGVVDSSEVSNR--TTEPIHFTPPMPHRSNTMPLLPMMTSVSATV 238

Query: 897  VAQQFHDPSGSVSFNFSAELLTVMQDMIRKEVRSYMAGLEQQNGMCFQSA-EDGFRNAAV 1073
            +A           FNFSAE  +VMQ+MIRKEVRSY+  L  QNGMCFQ+A  DGFRNA+V
Sbjct: 239  MA----------PFNFSAEFRSVMQEMIRKEVRSYIE-LHNQNGMCFQAAVNDGFRNASV 287

Query: 1074 KRIGISRIDS 1103
            KRIGISR+DS
Sbjct: 288  KRIGISRVDS 297


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