BLASTX nr result

ID: Glycyrrhiza24_contig00002845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002845
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48690.1| unknown [Medicago truncatula]                          152   3e-34
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              124   4e-26
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   124   4e-26
ref|XP_002314189.1| f-box family protein [Populus trichocarpa] g...   124   6e-26
ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...   119   2e-24

>gb|AFK48690.1| unknown [Medicago truncatula]
          Length = 259

 Score =  152 bits (383), Expect = 3e-34
 Identities = 120/313 (38%), Positives = 140/313 (44%), Gaps = 2/313 (0%)
 Frame = +2

Query: 5   MVFSSIPSYLDXXXXXXXXXXXXXXXXSESSPQFFPVPPPHGAGSTVDQAQLXXXXXXXX 184
           MVFSSIPSYLD                S   P   P      A   V   Q+        
Sbjct: 1   MVFSSIPSYLDPLNWQQVHGAG-----SIIRPGSIPDQAQAQAAHEVHTGQVQTHQAKLP 55

Query: 185 XXXXXXLKCPRCESTNTKFCYFNNXXXXXXXXXXXXXYFNNYSLSQPRHFCKTCRRYWTR 364
                 LKCPRCESTNTKFCY+NN                 Y+LSQPRHFCKTCRRYWTR
Sbjct: 56  PPSETNLKCPRCESTNTKFCYYNN-----------------YNLSQPRHFCKTCRRYWTR 98

Query: 365 GGALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXPISNNDKEKEYSPVPLSGVIATSS 544
           GGALRNVPVGGGC                       PISN++ +K+YS    S     S+
Sbjct: 99  GGALRNVPVGGGC-----RRSKKTKKSNTSSTPSKSPISNSN-DKDYS---TSASAIHST 149

Query: 545 TTPHDEQIGQFLN--HRPYMMTXXXXXXXXXXXXXREIQAXXXXXXXXXXXXXXXXVDQW 718
           +TP    +G+FL+  +RP  MT              +I                  VDQW
Sbjct: 150 STP----LGEFLHPTNRPNYMTSLQNLNRFGVGNMFQI----GDYSSTTGGGEGGVVDQW 201

Query: 719 RFQQFPNFFNGFDQSSTTPASVVSYPFQSDVVEAPSAGLVGGDVAAANSSRVAALTHQLP 898
           RFQQFP   NGFD S+    S VS+PFQS++VE               +SRV  L     
Sbjct: 202 RFQQFPFMNNGFDSST----SNVSFPFQSEIVE------------PTTTSRVTTL--MPA 243

Query: 899 SVKFEYNGGLNLL 937
           SVK E+NG L  L
Sbjct: 244 SVKSEHNGVLIFL 256


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  124 bits (312), Expect = 4e-26
 Identities = 72/143 (50%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
 Frame = +2

Query: 5   MVFSSIPSYLDXXXXXXXXXXXXXXXXSESSPQFFPVPPP--HGAGST--------VDQA 154
           MVFSS+PSYLD                  + P   P PPP  HG G T         D+A
Sbjct: 1   MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 155 QLXXXXXXXXXXXXXXLKCPRCESTNTKFCYFNNXXXXXXXXXXXXXYFNNYSLSQPRHF 334
           +L              LKCPRCESTNTKFCYFNN                 YSLSQPRHF
Sbjct: 61  RLANIPLPEAA-----LKCPRCESTNTKFCYFNN-----------------YSLSQPRHF 98

Query: 335 CKTCRRYWTRGGALRNVPVGGGC 403
           CKTCRRYWTRGGALRNVPVGGGC
Sbjct: 99  CKTCRRYWTRGGALRNVPVGGGC 121


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  124 bits (312), Expect = 4e-26
 Identities = 72/143 (50%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
 Frame = +2

Query: 5   MVFSSIPSYLDXXXXXXXXXXXXXXXXSESSPQFFPVPPP--HGAGST--------VDQA 154
           MVFSS+PSYLD                  + P   P PPP  HG G T         D+A
Sbjct: 1   MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 155 QLXXXXXXXXXXXXXXLKCPRCESTNTKFCYFNNXXXXXXXXXXXXXYFNNYSLSQPRHF 334
           +L              LKCPRCESTNTKFCYFNN                 YSLSQPRHF
Sbjct: 61  RLANIPLPEAA-----LKCPRCESTNTKFCYFNN-----------------YSLSQPRHF 98

Query: 335 CKTCRRYWTRGGALRNVPVGGGC 403
           CKTCRRYWTRGGALRNVPVGGGC
Sbjct: 99  CKTCRRYWTRGGALRNVPVGGGC 121


>ref|XP_002314189.1| f-box family protein [Populus trichocarpa]
           gi|222850597|gb|EEE88144.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score =  124 bits (311), Expect = 6e-26
 Identities = 107/359 (29%), Positives = 136/359 (37%), Gaps = 30/359 (8%)
 Frame = +2

Query: 5   MVFSSIPSYLDXXXXXXXXXXXXXXXXSESSPQFFPVPPPHGAG-----------STVDQ 151
           MVFSS+P YLD                 + SPQ  P+PPP   G           S  D+
Sbjct: 1   MVFSSVPVYLDPPSWQQQQQPSQQLGACDESPQLPPLPPPPHVGGSGTAGSIRPGSMSDR 60

Query: 152 AQLXXXXXXXXXXXXXXLKCPRCESTNTKFCYFNNXXXXXXXXXXXXXYFNNYSLSQPRH 331
           A+L              LKCPRC+STNTKFCYFNN                 YSLSQPRH
Sbjct: 61  ARLAKIPQPEAA-----LKCPRCDSTNTKFCYFNN-----------------YSLSQPRH 98

Query: 332 FCKTCRRYWTRGGALRNVPVGGGCXXXXXXXXXXXXXXXXXXXXXXXPISNNDKEKEYSP 511
           FCKTCRRYWTRGGALR+VPVGGGC                             +    SP
Sbjct: 99  FCKTCRRYWTRGGALRSVPVGGGCRRNK---------------------KTKSQSSSKSP 137

Query: 512 VPLSGVIATSSTTPHDEQIGQFLNHRPYMMTXXXXXXXXXXXXXREIQAXXXXXXXXXXX 691
           V     + ++S+T       Q + H P   T               +             
Sbjct: 138 VSSERQMGSTSSTSSSALPSQIIGHFPQQQTQFPFVTSLHNLTQFGVGNIGLNFGGIQGQ 197

Query: 692 XXXXXVDQWRFQQFPNFFNGFDQSST---TPASVVSYPFQSDVVEAPSAGL--------- 835
                    +        +G   SS+   +   V  +PF     E+P AGL         
Sbjct: 198 MGSTSGASGQAGMEFQMGSGSGMSSSSIFSAGGVQQFPF----FESPPAGLYPFQSDQGA 253

Query: 836 -----VGGDVAAANSSRVAALTHQLPSVKFEYNGGLNLLPRSPLSFSENNNNHY--NSW 991
                + G+ +   S   ++   QL  VK E N GLN L +  L   ENN  ++  N+W
Sbjct: 254 EAPTGIPGESSQLRSMASSSRVSQLAPVKSEGNQGLN-LSKPYLGIPENNQYYWGGNTW 311


>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score =  119 bits (297), Expect = 2e-24
 Identities = 70/150 (46%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
 Frame = +2

Query: 5   MVFSSIPSYLDXXXXXXXXXXXXXXXXSESSPQFFPVPPPHGA----------------- 133
           MVFSSIP YLD                   +PQ   +PPP G                  
Sbjct: 1   MVFSSIPVYLDPPNWQQQHNNQPPAGAGNENPQ---LPPPSGPPTGGGDGGGTTAGSIRP 57

Query: 134 GSTVDQAQLXXXXXXXXXXXXXXLKCPRCESTNTKFCYFNNXXXXXXXXXXXXXYFNNYS 313
           GS  D+A+L              LKCPRCESTNTKFCYFNN                 YS
Sbjct: 58  GSMTDRARLAKIPLPEMA-----LKCPRCESTNTKFCYFNN-----------------YS 95

Query: 314 LSQPRHFCKTCRRYWTRGGALRNVPVGGGC 403
           L+QPRHFCKTCRRYWTRGGALRNVPVGGGC
Sbjct: 96  LTQPRHFCKTCRRYWTRGGALRNVPVGGGC 125


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