BLASTX nr result

ID: Glycyrrhiza24_contig00002844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002844
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   236   3e-60
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...   222   9e-56
ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putativ...   199   8e-49
ref|XP_002314517.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-34
ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   145   8e-33

>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
           max]
          Length = 810

 Score =  236 bits (603), Expect = 3e-60
 Identities = 139/245 (56%), Positives = 156/245 (63%), Gaps = 6/245 (2%)
 Frame = -2

Query: 721 MEEVAA---SSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELE 551
           ME  AA   SSQRK KR K+A    +PEL+R+DSLP NSA+PQ ++DD FS+FIGSNELE
Sbjct: 1   MEAAAATANSSQRKPKR-KRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELE 59

Query: 550 GGFFSLEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDG---APSDMLKAEFN 380
           GGF SLEEIDEAEYGL IP+PE D R              + + DG   A SD    E  
Sbjct: 60  GGFLSLEEIDEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVDSACSDDTVVEAE 119

Query: 379 GETVXXXXXXXXXXXXXXXXXXXXXXXXXXEQPNXXXXXXXXXXXXXDNIDETEFYAWNE 200
            +                            E  +             +++DETEFYAWNE
Sbjct: 120 LDESLKSKEKKKKKKKTKNKKKDAREDQTVEPSDAGLDTNVKDDIGEEDVDETEFYAWNE 179

Query: 199 LRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL 20
           LRLHPLL+KAI KLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL
Sbjct: 180 LRLHPLLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLL 239

Query: 19  EEREK 5
           EEREK
Sbjct: 240 EEREK 244


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 798

 Score =  222 bits (565), Expect = 9e-56
 Identities = 129/241 (53%), Positives = 152/241 (63%), Gaps = 5/241 (2%)
 Frame = -2

Query: 712 VAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDP----FSIFIGSNELEGG 545
           +A +S +K KR  + ++  + EL+R DSLP NS+IPQ +E+D     FS+F GSNELEGG
Sbjct: 1   MAEASIKKSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGG 60

Query: 544 FFSLEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDGAPSDMLKAEFNGETVX 365
           F SLEEIDEAEYGL+IPDPE+ +R                + DGA S        GET+ 
Sbjct: 61  FLSLEEIDEAEYGLNIPDPENHDRKHNSKPDKKSNK---QKQDGACS-------GGETMN 110

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXEQ-PNXXXXXXXXXXXXXDNIDETEFYAWNELRLH 188
                                     +  N             +NIDETE+YAWNELRLH
Sbjct: 111 DESIKSEVKKKKKKKKNKDAKENQKVELSNTGVNADVKDSVDEENIDETEYYAWNELRLH 170

Query: 187 PLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEERE 8
           P LMKAI+KLGFKEPTPIQKAC+PAAAHQGKDV+GAAETGSGKTLAFGLPILQRLLEERE
Sbjct: 171 PRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERE 230

Query: 7   K 5
           K
Sbjct: 231 K 231


>ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 496

 Score =  199 bits (505), Expect = 8e-49
 Identities = 120/237 (50%), Positives = 143/237 (60%)
 Frame = -2

Query: 715 EVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGGFFS 536
           E   +S +KVK  K+     +PELER DSL  NS++   +EDDPFS F+GS+ELEGGF S
Sbjct: 9   EKLPNSNKKVK-WKRKRNNEDPELERFDSLSWNSSL---SEDDPFSGFVGSHELEGGFLS 64

Query: 535 LEEIDEAEYGLDIPDPEDDNRXXXXXXXXXXXXXXQHEVDGAPSDMLKAEFNGETVXXXX 356
           LEEIDE +YG +IP PE                   ++ DG+  +  K E   E      
Sbjct: 65  LEEIDEVDYGFEIPKPEKGKTGKKLKSKKQKH----NDADGSVKEKEKEEKTLEN----- 115

Query: 355 XXXXXXXXXXXXXXXXXXXXXXEQPNXXXXXXXXXXXXXDNIDETEFYAWNELRLHPLLM 176
                                 EQP              +++DE EF+AWNELRLHPLLM
Sbjct: 116 --EKKKKKRKKKKKKAKETQKNEQP--AAVSNGEDDTDGESVDEAEFHAWNELRLHPLLM 171

Query: 175 KAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREK 5
           K+IY+LGFKEPTPIQKACIP AAHQGKDV+GAAETGSGKTLAFGLPILQRLLEER+K
Sbjct: 172 KSIYRLGFKEPTPIQKACIPPAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEERDK 228


>ref|XP_002314517.1| predicted protein [Populus trichocarpa] gi|222863557|gb|EEF00688.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score =  150 bits (378), Expect = 4e-34
 Identities = 70/77 (90%), Positives = 76/77 (98%)
 Frame = -2

Query: 235 NIDETEFYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKT 56
           ++DETEFY WNELRLHPLLMK+IY+LGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKT
Sbjct: 155 SVDETEFYGWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKT 214

Query: 55  LAFGLPILQRLLEEREK 5
           LAFGLPILQRLLEE++K
Sbjct: 215 LAFGLPILQRLLEEQDK 231



 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 41/75 (54%), Positives = 53/75 (70%)
 Frame = -2

Query: 718 EEVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGGFF 539
           E   +S Q   K+ K+     +PE++R+DSLP NS+I Q   DDPFS+  GS+ELEGGF 
Sbjct: 8   EPRVSSKQSNNKKGKRKRTHIDPEIDRLDSLPWNSSISQ---DDPFSVIAGSHELEGGFL 64

Query: 538 SLEEIDEAEYGLDIP 494
           SLEEIDE +YGL+IP
Sbjct: 65  SLEEIDEGDYGLEIP 79


>ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
           [Cucumis sativus]
          Length = 784

 Score =  145 bits (367), Expect = 8e-33
 Identities = 69/76 (90%), Positives = 74/76 (97%)
 Frame = -2

Query: 232 IDETEFYAWNELRLHPLLMKAIYKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTL 53
           +DETE+YAWNELRLHPLLMK+IYKLGFKEPT IQKACIPAAA+QGKDVVGAAETGSGKTL
Sbjct: 190 VDETEYYAWNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTL 249

Query: 52  AFGLPILQRLLEEREK 5
           AFGLPILQR L+EREK
Sbjct: 250 AFGLPILQRFLDEREK 265



 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = -2

Query: 724 AMEEVAASSQRKVKRTKQALEAGNPELERIDSLPRNSAIPQQNEDDPFSIFIGSNELEGG 545
           A E   ++S +K +R K+     +PE ER+DSLP NS+IP    DD  S FIGSN+LEGG
Sbjct: 2   AAESTQSTSSQK-RRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 57

Query: 544 FFSLEEIDEAEYGLDIPDPE 485
           F SLEEIDEAEYG+ IP+P+
Sbjct: 58  FLSLEEIDEAEYGMVIPEPD 77


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