BLASTX nr result

ID: Glycyrrhiza24_contig00002840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002840
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW22414.1| S1 ribosomal protein [Glycine max]                     317   2e-84
gb|AFR34320.1| ribosomal protein S1 (mitochondrion) [Glycine max]     314   2e-83
gb|ABW22418.1| S1 ribosomal protein [Pisum sativum]                   313   3e-83
gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]                  312   8e-83
gb|ABW22416.1| S1 ribosomal protein [Phaseolus vulgaris]              306   6e-81

>gb|ABW22414.1| S1 ribosomal protein [Glycine max]
          Length = 206

 Score =  317 bits (813), Expect = 2e-84
 Identities = 170/212 (80%), Positives = 185/212 (87%), Gaps = 3/212 (1%)
 Frame = -2

Query: 875 MSSIYLSRLFPRSNSSLFLCSGKALQSQVSRLGEEKFLVDAGPGSPRICMQDELTKVPIN 696
           M SIYLSR FPRSNSSLFLCSGKALQS+V RLGEE FLVDAGPG+PRICMQDELT VPIN
Sbjct: 1   MMSIYLSRSFPRSNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRICMQDELTGVPIN 60

Query: 695 RSITRFENKVGSFLENKMAGGESLIRKKILERFFIDLVAGDSLIKERAAARFNDLAGSTD 516
           R+ TRFENKVG FL+  +  GESLI+KKILERFFIDLVAG+SLIKERAAARFNDL GSTD
Sbjct: 61  RA-TRFENKVG-FLD--LVAGESLIKKKILERFFIDLVAGESLIKERAAARFNDLVGSTD 116

Query: 515 NDVAAGEPPLILPRRFRQNRAWVKLNKLWGTNTKVKGFIIDRVKGGSYSVAIAGFIAFLP 336
             V AGEP L+LPRRFRQN AW++LNK+W TNTKVKGFIID+VK G YSVAIAGFI FLP
Sbjct: 117 --VVAGEPLLLLPRRFRQNLAWMELNKIWRTNTKVKGFIIDKVKKGGYSVAIAGFITFLP 174

Query: 335 YRSHRKR---SIPNDRFTIESINPKKTSIVVF 249
           +RSH KR    I NDRFTIESINPK+T+IVVF
Sbjct: 175 FRSHNKRRRKKISNDRFTIESINPKRTNIVVF 206


>gb|AFR34320.1| ribosomal protein S1 (mitochondrion) [Glycine max]
          Length = 205

 Score =  314 bits (804), Expect = 2e-83
 Identities = 167/210 (79%), Positives = 181/210 (86%), Gaps = 3/210 (1%)
 Frame = -2

Query: 869 SIYLSRLFPRSNSSLFLCSGKALQSQVSRLGEEKFLVDAGPGSPRICMQDELTKVPINRS 690
           SIYLSR FPRSNSSLFLCSGKALQS+V RLGEE FLVDAGPG+PRICMQDE T VPINR+
Sbjct: 2   SIYLSRSFPRSNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRICMQDEPTGVPINRA 61

Query: 689 ITRFENKVGSFLENKMAGGESLIRKKILERFFIDLVAGDSLIKERAAARFNDLAGSTDND 510
            TRFENKVGS     +  GESLI+KKILERFFIDLVAG+SLIKERAAARFNDL GSTD  
Sbjct: 62  -TRFENKVGSL---DLVAGESLIKKKILERFFIDLVAGESLIKERAAARFNDLVGSTD-- 115

Query: 509 VAAGEPPLILPRRFRQNRAWVKLNKLWGTNTKVKGFIIDRVKGGSYSVAIAGFIAFLPYR 330
           V AGEP L+LPRRFRQN AW++LNK+W TNTKVKGFIID+VK G YSVAIAGFI FLP+R
Sbjct: 116 VVAGEPLLLLPRRFRQNLAWMELNKIWRTNTKVKGFIIDKVKKGGYSVAIAGFITFLPFR 175

Query: 329 SHRKR---SIPNDRFTIESINPKKTSIVVF 249
           SH KR    I NDRFTIESINPK+T+IVVF
Sbjct: 176 SHNKRRRKKISNDRFTIESINPKRTNIVVF 205


>gb|ABW22418.1| S1 ribosomal protein [Pisum sativum]
          Length = 205

 Score =  313 bits (803), Expect = 3e-83
 Identities = 170/212 (80%), Positives = 185/212 (87%), Gaps = 3/212 (1%)
 Frame = -2

Query: 875 MSSIYLSRLFPRSNSSLFLCSGKALQSQVSRLGEEKFLVDAGPGSPRICMQDELTKVPIN 696
           M SIYLSR FPR NSSLFLCSGKALQS+V RLGEE FLVDAGPG+PR CMQDELT VPIN
Sbjct: 1   MMSIYLSRSFPRCNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRNCMQDELTGVPIN 60

Query: 695 RSITRFENKVGSFLENKMAGGESLIRKKILERFFIDLVAGDSLIKERAAARFNDLAGSTD 516
           R+ TRFENKVG FL+  +  GESLI+KKILER FIDLVAG+SLIKERAAARFNDL GST 
Sbjct: 61  RA-TRFENKVG-FLD--LVAGESLIKKKILERLFIDLVAGESLIKERAAARFNDLVGST- 115

Query: 515 NDVAAGEPPLILPRRFRQNRAWVKLNKLWGTNTKVKGFIIDRVKGGSYSVAIAGFIAFLP 336
            DV AGEP L+LPRRFRQNRAW+KLNK+W TNTKVKGFIID+VKGG YSVAIAGFI FLP
Sbjct: 116 -DVVAGEPLLLLPRRFRQNRAWMKLNKIWRTNTKVKGFIIDKVKGG-YSVAIAGFITFLP 173

Query: 335 YRSH---RKRSIPNDRFTIESINPKKTSIVVF 249
           +RSH   +KR I NDRFTIESINPK+T+IVVF
Sbjct: 174 FRSHNKRKKRRISNDRFTIESINPKRTNIVVF 205


>gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]
          Length = 205

 Score =  312 bits (799), Expect = 8e-83
 Identities = 169/212 (79%), Positives = 185/212 (87%), Gaps = 3/212 (1%)
 Frame = -2

Query: 875 MSSIYLSRLFPRSNSSLFLCSGKALQSQVSRLGEEKFLVDAGPGSPRICMQDELTKVPIN 696
           M SIYLSR FPR NSSLFLCSGKALQS+V RLGEE FLVDAGPG+PR CMQDELT VPIN
Sbjct: 1   MMSIYLSRSFPRCNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRNCMQDELTGVPIN 60

Query: 695 RSITRFENKVGSFLENKMAGGESLIRKKILERFFIDLVAGDSLIKERAAARFNDLAGSTD 516
           R+ TRFENKVG FL+  +  GESLI+KKILER FIDLVAG+SLIKERAAARFNDL GST 
Sbjct: 61  RA-TRFENKVG-FLD--LVAGESLIKKKILERLFIDLVAGESLIKERAAARFNDLVGST- 115

Query: 515 NDVAAGEPPLILPRRFRQNRAWVKLNKLWGTNTKVKGFIIDRVKGGSYSVAIAGFIAFLP 336
            DV AGEP L+LPRRFRQNRAW+KLNK+W TNTKVKGFIID+VKGG YSVAIAGFI FLP
Sbjct: 116 -DVVAGEPLLLLPRRFRQNRAWMKLNKIWRTNTKVKGFIIDKVKGG-YSVAIAGFITFLP 173

Query: 335 YRSH---RKRSIPNDRFTIESINPKKTSIVVF 249
           +RSH   +KR I ND+FTIESINPK+T+IVVF
Sbjct: 174 FRSHNKRKKRRISNDQFTIESINPKRTNIVVF 205


>gb|ABW22416.1| S1 ribosomal protein [Phaseolus vulgaris]
          Length = 206

 Score =  306 bits (783), Expect = 6e-81
 Identities = 170/214 (79%), Positives = 185/214 (86%), Gaps = 5/214 (2%)
 Frame = -2

Query: 875 MSSIYLSRLFPRSNSSLFLCSGKALQSQVSRLGEEKFLVDAGPGSPRICMQDELTKVPIN 696
           M SIYLSR FPRSNSSLFLCSGKALQS+V RLGEE FLVDAGPG+PRICMQDELT VPIN
Sbjct: 1   MMSIYLSRSFPRSNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRICMQDELTGVPIN 60

Query: 695 RSITRFENKVGSFLENKMAGGESLIRKKILERFFIDLVAGDSLIKERAAARFNDLAGSTD 516
           R+ TRFENKVG FL+  +  GESLI+KKILER FIDLVAG+SLIKERAAARFNDL GST 
Sbjct: 61  RA-TRFENKVG-FLD--LVAGESLIKKKILERLFIDLVAGESLIKERAAARFNDLVGST- 115

Query: 515 NDVAAGEPPLILPRRFRQNRAWVKLNKLWGTNTKVKGFIIDRVKGGSYSVAIAGFIAFLP 336
            DV AGE PL+LPRRFRQN AW+KLNK+W TNTKVKGFI+D+VKGG YSVAIAGFI FLP
Sbjct: 116 -DVVAGE-PLLLPRRFRQNLAWMKLNKIWRTNTKVKGFILDKVKGG-YSVAIAGFITFLP 172

Query: 335 YRSHRKR---SIPNDRFTIESINP--KKTSIVVF 249
           +RSH KR    I NDRFTIESINP  K+T+IVVF
Sbjct: 173 FRSHNKRRRKKISNDRFTIESINPKSKRTNIVVF 206


Top