BLASTX nr result

ID: Glycyrrhiza24_contig00002828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002828
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding prote...   173   4e-41
ref|XP_003526418.1| PREDICTED: uncharacterized RNA-binding prote...   172   9e-41
ref|XP_003603428.1| Zinc finger protein-like protein [Medicago t...   160   3e-37
ref|XP_002515546.1| protein with unknown function [Ricinus commu...   153   4e-35
ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33

>ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 159

 Score =  173 bits (439), Expect = 4e-41
 Identities = 80/99 (80%), Positives = 80/99 (80%)
 Frame = +1

Query: 85  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXX 264
           TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS         M RMRP      
Sbjct: 53  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS-SAGPFDADMPRMRP-YGFGG 110

Query: 265 XXSTRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
             S RPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD
Sbjct: 111 GSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 149



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/93 (35%), Positives = 42/93 (45%)
 Frame = +1

Query: 103 RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXXXSTRP 282
           RPGDW C    C   NF  R SC +CG P+              R           +T P
Sbjct: 3   RPGDWNCRT--CNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGR----GSSSFGFTTGP 56

Query: 283 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
             + GDW CT   C  HNFA+R  C++C AP++
Sbjct: 57  DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKE 89


>ref|XP_003526418.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 163

 Score =  172 bits (436), Expect = 9e-41
 Identities = 80/102 (78%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = +1

Query: 85  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRP---XXX 255
           TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS         M RMRP      
Sbjct: 53  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDS-SAGPFDVDMPRMRPFGFGGS 111

Query: 256 XXXXXSTRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
                S RPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD
Sbjct: 112 GGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 153



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 32/93 (34%), Positives = 41/93 (44%)
 Frame = +1

Query: 103 RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXXXSTRP 282
           RPGDW C    C   NF  R SC +CG P+                          +T P
Sbjct: 3   RPGDWNCRT--CNHLNFQRRESCQRCGEPRSGGGDYGGGFGG----GRGSSSFGGFTTGP 56

Query: 283 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
             + GDW CT   C  HNFA+R  C++C AP++
Sbjct: 57  DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKE 89


>ref|XP_003603428.1| Zinc finger protein-like protein [Medicago truncatula]
           gi|355492476|gb|AES73679.1| Zinc finger protein-like
           protein [Medicago truncatula]
          Length = 185

 Score =  160 bits (405), Expect = 3e-37
 Identities = 73/104 (70%), Positives = 75/104 (72%), Gaps = 5/104 (4%)
 Frame = +1

Query: 85  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXX 264
           TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPK+              +R       
Sbjct: 57  TTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKDIDTFSSDSSDMPRLLRSPYGFGA 116

Query: 265 XX-----STRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
                  STRPGWKSGDWICTRSGCNEHNFANRMECYRCN PRD
Sbjct: 117 GSAGGGASTRPGWKSGDWICTRSGCNEHNFANRMECYRCNGPRD 160



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/93 (35%), Positives = 41/93 (44%)
 Frame = +1

Query: 103 RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXXXSTRP 282
           RPGDW C    C   NF  R SC +CG  +  S                       +T P
Sbjct: 3   RPGDWNCRT--CNHLNFQRRESCQRCGESRMTSGCGAVDFGGSFLGGRGSSSPFPFTTGP 60

Query: 283 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
             + GDW CT   C  HNFA+R  C++C AP+D
Sbjct: 61  DVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKD 93


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score =  153 bits (387), Expect = 4e-35
 Identities = 70/98 (71%), Positives = 76/98 (77%)
 Frame = +1

Query: 88  TGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXX 267
           TGPDVRPGDWYCT GNCGAHNFASRSSCFKCGA K++S         M+RMR        
Sbjct: 52  TGPDVRPGDWYCTFGNCGAHNFASRSSCFKCGASKDES--SGGFDGEMSRMR-GFGFGSG 108

Query: 268 XSTRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
            ++R GWKSGDWICTRSGCNEHNFA+R ECYRCNAPRD
Sbjct: 109 STSRSGWKSGDWICTRSGCNEHNFASRTECYRCNAPRD 146


>ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|222865720|gb|EEF02851.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  148 bits (374), Expect = 1e-33
 Identities = 66/98 (67%), Positives = 74/98 (75%)
 Frame = +1

Query: 88  TGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXX 267
           TGPDVRPGDWYC+VGNCGAHNFASRSSCFKCG  K++S         ++ MR        
Sbjct: 51  TGPDVRPGDWYCSVGNCGAHNFASRSSCFKCGMSKDES-SGGGLDADISWMRGYGFGGGS 109

Query: 268 XSTRPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
            S+R  WKSGDWICTRSGCNEHNFA+R ECYRCNAPR+
Sbjct: 110 ASSRSNWKSGDWICTRSGCNEHNFASRTECYRCNAPRE 147



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 30/93 (32%), Positives = 40/93 (43%)
 Frame = +1

Query: 103 RPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSXXXXXXXXXMTRMRPXXXXXXXXSTRP 282
           RPGDW C   +C   NF  R SC +CG P+             +             T P
Sbjct: 3   RPGDWNCR--SCQHLNFQRRDSCQRCGDPRPGERDHYGSFGGRS-------GGSFGFTGP 53

Query: 283 GWKSGDWICTRSGCNEHNFANRMECYRCNAPRD 381
             + GDW C+   C  HNFA+R  C++C   +D
Sbjct: 54  DVRPGDWYCSVGNCGAHNFASRSSCFKCGMSKD 86


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