BLASTX nr result

ID: Glycyrrhiza24_contig00002803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002803
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [...   194   8e-48
gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliar...   194   8e-48
ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containin...   166   1e-39
ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containin...   129   3e-28
ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25

>ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355481941|gb|AES63144.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1146

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/133 (69%), Positives = 105/133 (78%)
 Frame = +2

Query: 2   SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKYWVKKMAALFGYSDDYETLREHEN 181
           SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPK+WVK+M ALFG+SD+ E  R H N
Sbjct: 97  SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKFWVKEMVALFGHSDNCEMSRVHGN 156

Query: 182 SSVLKNSSTVPKTDYDRYHXXXXXXXEIDQLNSGRSGSRRKQEDERKQRTPDVERNTNFK 361
            S LK+SS + +TD DRYH       E+ QL  GRS SRR+QEDERKQRT D E NTN+K
Sbjct: 157 FSALKHSSNILETDSDRYHSRRSRSREMGQLYGGRS-SRRRQEDERKQRTLDEEWNTNYK 215

Query: 362 DNYKRNCRDRTPD 400
           DN+KR  R++T D
Sbjct: 216 DNHKRKYRNKTSD 228


>gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
           subunit [Medicago truncatula]
          Length = 584

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/133 (69%), Positives = 105/133 (78%)
 Frame = +2

Query: 2   SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKYWVKKMAALFGYSDDYETLREHEN 181
           SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPK+WVK+M ALFG+SD+ E  R H N
Sbjct: 95  SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKFWVKEMVALFGHSDNCEMSRVHGN 154

Query: 182 SSVLKNSSTVPKTDYDRYHXXXXXXXEIDQLNSGRSGSRRKQEDERKQRTPDVERNTNFK 361
            S LK+SS + +TD DRYH       E+ QL  GRS SRR+QEDERKQRT D E NTN+K
Sbjct: 155 FSALKHSSNILETDSDRYHSRRSRSREMGQLYGGRS-SRRRQEDERKQRTLDEEWNTNYK 213

Query: 362 DNYKRNCRDRTPD 400
           DN+KR  R++T D
Sbjct: 214 DNHKRKYRNKTSD 226


>ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Glycine max]
          Length = 587

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/135 (62%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
 Frame = +2

Query: 2   SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKYWVKKMAALFGYSDDYETLREHEN 181
           SG+KTCSHGT CNFIHCFRNPGGDYEWADSDKPPPK+WVKKM ALFGYSDDYET  E  N
Sbjct: 318 SGFKTCSHGTTCNFIHCFRNPGGDYEWADSDKPPPKFWVKKMIALFGYSDDYETSMEQGN 377

Query: 182 SSVLKNSSTVPKTDYDR--YHXXXXXXXEIDQLNSGRSGSRRKQEDERKQRTPDVERNTN 355
            S       + KTD DR  +        E+DQLN G SG RRKQ DERK RTP    N +
Sbjct: 378 MS-------LSKTDSDRTCHSRRRSRSREMDQLNCGHSG-RRKQRDERKHRTP----NED 425

Query: 356 FKDNYKRNCRDRTPD 400
           +  ++KR  R RTPD
Sbjct: 426 WNGSFKRKSRGRTPD 440


>ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Glycine max]
          Length = 518

 Score =  129 bits (323), Expect = 3e-28
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +2

Query: 2   SGYKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKYWVKKMAALFGYSDDYETLREHEN 181
           SG+KTCSHGTACNFIHCFRNPGGDYEWADSDKPPPK+WVKKM  LFG+SDDYET RE  N
Sbjct: 329 SGFKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKFWVKKMITLFGFSDDYETSREQGN 388

Query: 182 SSVLKNSS 205
            S+ K  S
Sbjct: 389 LSLSKTDS 396


>ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Cucumis sativus]
          Length = 838

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/109 (54%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
 Frame = +2

Query: 8   YKTCSHGTACNFIHCFRNPGGDYEWADSDKPPPKYWVKKMAALFGYSDDY--ETLREHEN 181
           YKTCSHGTACNFIHCFRNPGGDYEWADSDK PP+YW+KKM +LFGY D+Y  ET  E E+
Sbjct: 363 YKTCSHGTACNFIHCFRNPGGDYEWADSDKSPPRYWLKKMTSLFGYLDEYENETHSELEH 422

Query: 182 SSVLKNSSTVPKTDYDRYHXXXXXXXEIDQLNSGRSGSRRKQEDERKQR 328
            +    SS     D D Y         +D       GSRR   +E   R
Sbjct: 423 WNKFGKSSKSMTIDVDSYRSRRSKSRSLDH------GSRRSDNNENDYR 465


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