BLASTX nr result

ID: Glycyrrhiza24_contig00002774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002774
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK24457.1| expansin 4 [Ziziphus jujuba]                           250   1e-64
gb|ACK43222.1| expansin 2 [Ziziphus jujuba]                           250   1e-64
ref|XP_003523276.1| PREDICTED: expansin-A8-like [Glycine max]         249   2e-64
gb|ABB59694.1| alpha-expansin 2 [Gossypium hirsutum]                  248   4e-64
gb|ACN87961.1| expansin 2 [Citrus sinensis]                           248   5e-64

>gb|AFK24457.1| expansin 4 [Ziziphus jujuba]
          Length = 253

 Score =  250 bits (638), Expect = 1e-64
 Identities = 115/133 (86%), Positives = 119/133 (89%)
 Frame = -1

Query: 401 HATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMRCDTDPKW 222
           HATFY             GYGNLYSQGYGTNTAALSTALFNNG+SCGSCYEMRCD+DPKW
Sbjct: 35  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDSDPKW 94

Query: 221 CLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 42
           CLPGSI+VTATNFCPPN ALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV
Sbjct: 95  CLPGSILVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 154

Query: 41  PCVKKGGIRFTIN 3
           PCVKKGG+RFTIN
Sbjct: 155 PCVKKGGVRFTIN 167


>gb|ACK43222.1| expansin 2 [Ziziphus jujuba]
          Length = 259

 Score =  250 bits (638), Expect = 1e-64
 Identities = 115/133 (86%), Positives = 119/133 (89%)
 Frame = -1

Query: 401 HATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMRCDTDPKW 222
           HATFY             GYGNLYSQGYGTNTAALSTALFNNG+SCGSCYEMRCD+DPKW
Sbjct: 41  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDSDPKW 100

Query: 221 CLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 42
           CLPGSI+VTATNFCPPN ALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV
Sbjct: 101 CLPGSILVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 160

Query: 41  PCVKKGGIRFTIN 3
           PCVKKGG+RFTIN
Sbjct: 161 PCVKKGGVRFTIN 173


>ref|XP_003523276.1| PREDICTED: expansin-A8-like [Glycine max]
          Length = 250

 Score =  249 bits (636), Expect = 2e-64
 Identities = 115/133 (86%), Positives = 119/133 (89%)
 Frame = -1

Query: 401 HATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMRCDTDPKW 222
           HATFY             GYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEM+CDTDPKW
Sbjct: 32  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMKCDTDPKW 91

Query: 221 CLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 42
           CLPGSIIVTATNFCPPN AL+N+NGGWCNPPLQHFDLAEPAFLQIAQYKAGIVP+SFRRV
Sbjct: 92  CLPGSIIVTATNFCPPNFALANNNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRV 151

Query: 41  PCVKKGGIRFTIN 3
           PCVKKGGIRFTIN
Sbjct: 152 PCVKKGGIRFTIN 164


>gb|ABB59694.1| alpha-expansin 2 [Gossypium hirsutum]
          Length = 252

 Score =  248 bits (634), Expect = 4e-64
 Identities = 115/133 (86%), Positives = 119/133 (89%)
 Frame = -1

Query: 401 HATFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMRCDTDPKW 222
           HATFY             GYGNLYSQGYGTNTAALSTALFNNG+SCGSCYEMRCD+DPKW
Sbjct: 34  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCDSDPKW 93

Query: 221 CLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRV 42
           CLPGSI VTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQY+AGIVPISFRRV
Sbjct: 94  CLPGSITVTATNFCPPNLALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPISFRRV 153

Query: 41  PCVKKGGIRFTIN 3
           PC+KKGGIRFTIN
Sbjct: 154 PCMKKGGIRFTIN 166


>gb|ACN87961.1| expansin 2 [Citrus sinensis]
          Length = 254

 Score =  248 bits (633), Expect = 5e-64
 Identities = 118/165 (71%), Positives = 128/165 (77%)
 Frame = -1

Query: 497 IAATSSISXXXXXXXXXLRXXXXXXXXXXXXGHATFYXXXXXXXXXXXXXGYGNLYSQGY 318
           IAA+SS++          R            GHATFY             GYGNLYSQGY
Sbjct: 4   IAASSSVALLLFVLNFCFRGTFGDYGGGWQSGHATFYGGGDASGTMGGACGYGNLYSQGY 63

Query: 317 GTNTAALSTALFNNGMSCGSCYEMRCDTDPKWCLPGSIIVTATNFCPPNLALSNDNGGWC 138
           GTNTAALSTALFNNG+SCGSCYEM+C+ DPKWCLPGSIIVTATNFCPPNLALSNDNGGWC
Sbjct: 64  GTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWC 123

Query: 137 NPPLQHFDLAEPAFLQIAQYKAGIVPISFRRVPCVKKGGIRFTIN 3
           NPPLQHFD+AEPAFLQIAQY+AGIVPISFRR+PC KKGGIRFT+N
Sbjct: 124 NPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVN 168


Top