BLASTX nr result

ID: Glycyrrhiza24_contig00002773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002773
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein C...   107   1e-21
ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein C...   105   5e-21
gb|AFK42501.1| unknown [Medicago truncatula]                           84   9e-15
ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medi...    84   9e-15
dbj|BAJ33709.1| unnamed protein product [Thellungiella halophila]      77   1e-12

>ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
           chloroplastic-like [Glycine max]
          Length = 278

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = +1

Query: 205 YFFGTRLNNGTS-NGGRFHALFNLLXXXXXXXXXXXXXXDVRVKPDGDRLVWFPGAQPPE 381
           YFFGTRLNN T+ N GRFHAL N                +V+VKP GDRLVWFP A+PPE
Sbjct: 11  YFFGTRLNNPTTLNNGRFHALLNF--GKKKAAAPPPKKKEVKVKPSGDRLVWFPNAEPPE 68

Query: 382 WLDGTMIGDRGFDPFGFAK 438
           WLDG+MIGDRGFDPFGFAK
Sbjct: 69  WLDGSMIGDRGFDPFGFAK 87


>ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
           chloroplastic-like [Glycine max]
          Length = 282

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
 Frame = +1

Query: 205 YFFGTRLNN---GTSNGGRFHALFNLLXXXXXXXXXXXXXXDVRVKPDGDRLVWFPGAQP 375
           YFFGTRLNN    T N GRFHAL N                +V+VKP GDRLVWFP A+P
Sbjct: 12  YFFGTRLNNVNTTTLNNGRFHALLNF-GKKKTAPQPPPKKKEVKVKPSGDRLVWFPNAEP 70

Query: 376 PEWLDGTMIGDRGFDPFGFAK 438
           PEWLDG+MIGDRGFDPFGFAK
Sbjct: 71  PEWLDGSMIGDRGFDPFGFAK 91


>gb|AFK42501.1| unknown [Medicago truncatula]
          Length = 224

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/78 (57%), Positives = 48/78 (61%)
 Frame = +1

Query: 205 YFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXXDVRVKPDGDRLVWFPGAQPPEW 384
           +FFGT L   TSN GR  A FN+                VR K + D LVWFPGAQPPEW
Sbjct: 12  HFFGTSLCKPTSNMGRVRAFFNI-GTKLKPAPKKKEVKKVR-KQESDGLVWFPGAQPPEW 69

Query: 385 LDGTMIGDRGFDPFGFAK 438
           LDGTMIGDRGFDP G AK
Sbjct: 70  LDGTMIGDRGFDPLGLAK 87


>ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
           gi|355489924|gb|AES71127.1| Chlorophyll a-b binding
           protein CP29.3 [Medicago truncatula]
          Length = 278

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/78 (57%), Positives = 48/78 (61%)
 Frame = +1

Query: 205 YFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXXDVRVKPDGDRLVWFPGAQPPEW 384
           +FFGT L   TSN GR  A FN+                VR K + D LVWFPGAQPPEW
Sbjct: 12  HFFGTSLCKPTSNMGRVRAFFNI-GTKLKPAPKKKEVKKVR-KQESDGLVWFPGAQPPEW 69

Query: 385 LDGTMIGDRGFDPFGFAK 438
           LDGTMIGDRGFDP G AK
Sbjct: 70  LDGTMIGDRGFDPLGLAK 87


>dbj|BAJ33709.1| unnamed protein product [Thellungiella halophila]
          Length = 276

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 44/76 (57%)
 Frame = +1

Query: 211 FGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXXDVRVKPDGDRLVWFPGAQPPEWLD 390
           FG R+ +     GR  A F                   +V+ DGDRLVWFPGA+PPEWLD
Sbjct: 13  FGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSR--QVQDDGDRLVWFPGAKPPEWLD 70

Query: 391 GTMIGDRGFDPFGFAK 438
           G+MIGDRGFDPFG  K
Sbjct: 71  GSMIGDRGFDPFGLGK 86


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