BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002772
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein C...   459   e-127
ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein C...   459   e-127
ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medi...   437   e-120
ref|XP_002312153.1| light-harvesting complex II protein Lhcb8 [P...   406   e-111
ref|XP_002526901.1| chlorophyll A/B binding protein, putative [R...   405   e-110

>ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like
            [Glycine max]
          Length = 278

 Score =  459 bits (1182), Expect = e-127
 Identities = 228/270 (84%), Positives = 240/270 (88%), Gaps = 1/270 (0%)
 Frame = -3

Query: 1077 YFFGTRLNNGTS-NGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQPPE 901
            YFFGTRLNN T+ N GRFHAL N               K+V+VKP GDRLVWFP A+PPE
Sbjct: 11   YFFGTRLNNPTTLNNGRFHALLNF--GKKKAAAPPPKKKEVKVKPSGDRLVWFPNAEPPE 68

Query: 900  WLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPFQP 721
            WLDG+MIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKN+AGDVIGTR E A+VKPTPFQP
Sbjct: 69   WLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEVADVKPTPFQP 128

Query: 720  YTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSLPF 541
            Y+EVFGIQRFRECELIHGRWAMLGALGAL VEA TGVAWQDAGKVELVEGSSYLG  LPF
Sbjct: 129  YSEVFGIQRFRECELIHGRWAMLGALGALVVEALTGVAWQDAGKVELVEGSSYLGLPLPF 188

Query: 540  SLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHA 361
            SLT LIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQLAEIKH+
Sbjct: 189  SLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHS 248

Query: 360  RLAMVVFLIFGIQAAVTGKGPISFIATFNK 271
            RLAMVVFLIF IQAAVTGKGPISF+ATFNK
Sbjct: 249  RLAMVVFLIFAIQAAVTGKGPISFLATFNK 278


>ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein CP29.3, chloroplastic-like
            [Glycine max]
          Length = 282

 Score =  459 bits (1182), Expect = e-127
 Identities = 229/272 (84%), Positives = 240/272 (88%), Gaps = 3/272 (1%)
 Frame = -3

Query: 1077 YFFGTRLNN---GTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQP 907
            YFFGTRLNN    T N GRFHAL N               K+V+VKP GDRLVWFP A+P
Sbjct: 12   YFFGTRLNNVNTTTLNNGRFHALLNF-GKKKTAPQPPPKKKEVKVKPSGDRLVWFPNAEP 70

Query: 906  PEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPF 727
            PEWLDG+MIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKN+AGDVIGTR E AEVKPTPF
Sbjct: 71   PEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNIAGDVIGTRVEVAEVKPTPF 130

Query: 726  QPYTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSL 547
            QPY+EVFGIQRFRECELIHGRWAMLG+LGALAVEA TGVAWQDAGKVELVEGSSYLG  L
Sbjct: 131  QPYSEVFGIQRFRECELIHGRWAMLGSLGALAVEALTGVAWQDAGKVELVEGSSYLGLPL 190

Query: 546  PFSLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIK 367
            PFSLT LIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQLAEIK
Sbjct: 191  PFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIK 250

Query: 366  HARLAMVVFLIFGIQAAVTGKGPISFIATFNK 271
            H+RLAMVVFLIF IQAAVTGKGPISF+ATFNK
Sbjct: 251  HSRLAMVVFLIFAIQAAVTGKGPISFLATFNK 282


>ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
            gi|355489924|gb|AES71127.1| Chlorophyll a-b binding
            protein CP29.3 [Medicago truncatula]
          Length = 278

 Score =  437 bits (1125), Expect = e-120
 Identities = 220/269 (81%), Positives = 232/269 (86%)
 Frame = -3

Query: 1077 YFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQPPEW 898
            +FFGT L   TSN GR  A FN+              K VR K + D LVWFPGAQPPEW
Sbjct: 12   HFFGTSLCKPTSNMGRVRAFFNI-GTKLKPAPKKKEVKKVR-KQESDGLVWFPGAQPPEW 69

Query: 897  LDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPFQPY 718
            LDGTMIGDRGFDP G AKP EYLQFDLDSLDQNLAKNLAGD+IGTR E+ +V PTPFQPY
Sbjct: 70   LDGTMIGDRGFDPLGLAKPVEYLQFDLDSLDQNLAKNLAGDIIGTRVESTDVNPTPFQPY 129

Query: 717  TEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSLPFS 538
            TEVFGIQRFRECE+IHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSY GFSLPFS
Sbjct: 130  TEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFS 189

Query: 537  LTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHAR 358
            ++ LIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLA+DPEEKERLQLAEIKH+R
Sbjct: 190  ISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSR 249

Query: 357  LAMVVFLIFGIQAAVTGKGPISFIATFNK 271
            LAMVVFLIF IQAAVTGKGPI FIATFN+
Sbjct: 250  LAMVVFLIFAIQAAVTGKGPIGFIATFNQ 278


>ref|XP_002312153.1| light-harvesting complex II protein Lhcb8 [Populus trichocarpa]
            gi|222851973|gb|EEE89520.1| light-harvesting complex II
            protein Lhcb8 [Populus trichocarpa]
          Length = 275

 Score =  406 bits (1043), Expect = e-111
 Identities = 204/268 (76%), Positives = 217/268 (80%)
 Frame = -3

Query: 1077 YFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRVKPDGDRLVWFPGAQPPEW 898
            YF GTR      N G+  ALF                K    K   DRLVWFPGA PPEW
Sbjct: 11   YFSGTRTQYTKQNPGKIQALFGF---GTKKSPPPPPPKKSSPKQFEDRLVWFPGASPPEW 67

Query: 897  LDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPFQPY 718
            LDGTM+GDRGFDPF   KPAEYLQFDLDSLDQNLAKNLAGDVIG R +  EVKPTPFQPY
Sbjct: 68   LDGTMVGDRGFDPFALGKPAEYLQFDLDSLDQNLAKNLAGDVIGVRVDATEVKPTPFQPY 127

Query: 717  TEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSLPFS 538
            +EVFG+QRFRECELIHGRWAMLG LGA+AVEA TGVAWQDAGKVEL+EGSSYLG  LPFS
Sbjct: 128  SEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELIEGSSYLGQPLPFS 187

Query: 537  LTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHAR 358
            LT LIWIEV+V+GYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+ E LQLAEIKHAR
Sbjct: 188  LTTLIWIEVIVVGYIEFQRNAELDPEKRLYPGG-YFDPLGLASDPEKIENLQLAEIKHAR 246

Query: 357  LAMVVFLIFGIQAAVTGKGPISFIATFN 274
            LAMV FLIFGIQAA TGKGPISF+ATFN
Sbjct: 247  LAMVAFLIFGIQAAFTGKGPISFVATFN 274


>ref|XP_002526901.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223533800|gb|EEF35532.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 282

 Score =  405 bits (1040), Expect = e-110
 Identities = 202/270 (74%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
 Frame = -3

Query: 1077 YFFGTRLNNGTSNGGRFHALFNLLXXXXXXXXXXXXXKDVRV-KPDGDRLVWFPGAQPPE 901
            +FF TR  N     G+  A F                      KP  DRLVWFPGA PPE
Sbjct: 14   HFFRTRTQNPKPKVGKIQARFGFGGFGGFGTKKSSPPPKKTAPKPVEDRLVWFPGANPPE 73

Query: 900  WLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFETAEVKPTPFQP 721
            WLDGTM+GDRGFDPFG  KPAEYLQF+LDSLDQNLAKN+AGD+IG R E  EVKPTPFQP
Sbjct: 74   WLDGTMVGDRGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGVRVEPNEVKPTPFQP 133

Query: 720  YTEVFGIQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGFSLPF 541
            Y+EVFG+QRFRECE+IHGRWAMLG LGALAVEA TGVAWQDAGKVELVEGSSYLG  LPF
Sbjct: 134  YSEVFGLQRFRECEVIHGRWAMLGTLGALAVEALTGVAWQDAGKVELVEGSSYLGQPLPF 193

Query: 540  SLTALIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHA 361
            SLT LIWIEVLVIGYIEFQRNAELDPEKR+YPGG +FDPLGLA+DPE+KE LQLAEIKH+
Sbjct: 194  SLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGG-YFDPLGLASDPEKKENLQLAEIKHS 252

Query: 360  RLAMVVFLIFGIQAAVTGKGPISFIATFNK 271
            RLAMV FLIFGIQAA TGKGPI+F+ATFN+
Sbjct: 253  RLAMVAFLIFGIQAAFTGKGPIAFVATFNQ 282