BLASTX nr result

ID: Glycyrrhiza24_contig00002729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002729
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   243   3e-62
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   237   3e-60
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   237   3e-60
ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [...   229   4e-58
ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   227   2e-57

>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
           [Glycine max]
          Length = 368

 Score =  243 bits (621), Expect = 3e-62
 Identities = 120/155 (77%), Positives = 128/155 (82%)
 Frame = -2

Query: 820 EGRQRSGSEPPNKKXXXXXXXXXXXXXXXXSKAIGKMFFKTKLCCKFRAGTCPYITNCNF 641
           EGR    SEPP+KK                 KAIGKMFFKTKLCCKFRAGTCPYITNCNF
Sbjct: 61  EGRS---SEPPSKKSRNSSQEGSSSNRS---KAIGKMFFKTKLCCKFRAGTCPYITNCNF 114

Query: 640 AHSIEELRRPPPNWQEIVAAHEEEKAVLMSEQQQPPREEFQIPTLGSSGFAGDMTQRSYK 461
           AHSIEELRRPPPNWQEIVAAHEEEKAV++    +PPREEFQIPT+GS+ F+G+M QRSYK
Sbjct: 115 AHSIEELRRPPPNWQEIVAAHEEEKAVMI----EPPREEFQIPTVGSTTFSGEMMQRSYK 170

Query: 460 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 356
           GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI
Sbjct: 171 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 205



 Score =  115 bits (289), Expect = 9e-24
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -1

Query: 152 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRD 3
           NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGG +EGENRD
Sbjct: 241 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGENRD 290


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 350

 Score =  237 bits (604), Expect = 3e-60
 Identities = 119/155 (76%), Positives = 124/155 (80%)
 Frame = -2

Query: 820 EGRQRSGSEPPNKKXXXXXXXXXXXXXXXXSKAIGKMFFKTKLCCKFRAGTCPYITNCNF 641
           + + RSGSEPPNKK                 KAIGKMFFKTKLCCKFRAGTCPYITNCNF
Sbjct: 54  QSQSRSGSEPPNKKSRSSQDVTSSNRS----KAIGKMFFKTKLCCKFRAGTCPYITNCNF 109

Query: 640 AHSIEELRRPPPNWQEIVAAHEEEKAVLMSEQQQPPREEFQIPTLGSSGFAGDMTQRSYK 461
           AHSIEELRRPP NWQEIVAAHEEEKAVL       PREEFQIP+LG+S F G  +QRSYK
Sbjct: 110 AHSIEELRRPPHNWQEIVAAHEEEKAVL-----SEPREEFQIPSLGTSNF-GSESQRSYK 163

Query: 460 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 356
           GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI
Sbjct: 164 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 198



 Score =  106 bits (265), Expect = 5e-21
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -1

Query: 155 TNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRD 3
           +N+KPSNWKTRICNKWE+TGYCPFGNKCHFAHGA ELHRYGGG +E E RD
Sbjct: 224 SNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRD 274


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score =  237 bits (604), Expect = 3e-60
 Identities = 119/155 (76%), Positives = 124/155 (80%)
 Frame = -2

Query: 820 EGRQRSGSEPPNKKXXXXXXXXXXXXXXXXSKAIGKMFFKTKLCCKFRAGTCPYITNCNF 641
           + + RSGSEPPNKK                 KAIGKMFFKTKLCCKFRAGTCPYITNCNF
Sbjct: 54  QSQSRSGSEPPNKKSRSSQDVTSSNRS----KAIGKMFFKTKLCCKFRAGTCPYITNCNF 109

Query: 640 AHSIEELRRPPPNWQEIVAAHEEEKAVLMSEQQQPPREEFQIPTLGSSGFAGDMTQRSYK 461
           AHSIEELRRPP NWQEIVAAHEEEKAVL       PREEFQIP+LG+S F G  +QRSYK
Sbjct: 110 AHSIEELRRPPHNWQEIVAAHEEEKAVL-----SEPREEFQIPSLGTSNF-GSESQRSYK 163

Query: 460 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 356
           GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI
Sbjct: 164 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 198



 Score =  106 bits (265), Expect = 5e-21
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -1

Query: 155 TNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRD 3
           +N+KPSNWKTRICNKWE+TGYCPFGNKCHFAHGA ELHRYGGG +E E RD
Sbjct: 213 SNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRD 263


>ref|XP_003628788.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355522810|gb|AET03264.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 376

 Score =  229 bits (585), Expect = 4e-58
 Identities = 114/155 (73%), Positives = 123/155 (79%), Gaps = 4/155 (2%)
 Frame = -2

Query: 808 RSGSEPPNKKXXXXXXXXXXXXXXXXS---KAIGKMFFKTKLCCKFRAGTCPYITNCNFA 638
           R+GSEPP+KK                S   KAIGKMFFKTKLCCKFR GTCPYITNCNFA
Sbjct: 56  RAGSEPPSKKSRSNSQDGGGGGSGGGSNRAKAIGKMFFKTKLCCKFRVGTCPYITNCNFA 115

Query: 637 HSIEELRRPPPNWQEIVAAHEEEKAVLMSEQQQPPREEFQIPTLGSSGFAGD-MTQRSYK 461
           HS+EELRRPP NWQEIVAAHEEE++V+     + PREEFQIPT+GSS F G+ M  RSYK
Sbjct: 116 HSVEELRRPPENWQEIVAAHEEERSVI-----EQPREEFQIPTVGSSTFVGESMNNRSYK 170

Query: 460 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 356
           GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI
Sbjct: 171 GRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 205



 Score =  111 bits (278), Expect = 2e-22
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 152 NSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRD 3
           N KPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGG +EGE+RD
Sbjct: 251 NLKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGESRD 300


>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Vitis vinifera]
          Length = 372

 Score =  227 bits (579), Expect = 2e-57
 Identities = 116/166 (69%), Positives = 124/166 (74%), Gaps = 11/166 (6%)
 Frame = -2

Query: 820 EGRQ---RSGSEPPNKKXXXXXXXXXXXXXXXXS--------KAIGKMFFKTKLCCKFRA 674
           EGRQ   RSGSEPPNKK                         KAIGKMFFKTKLCCKFRA
Sbjct: 54  EGRQSQSRSGSEPPNKKSRNSQVVDSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRA 113

Query: 673 GTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEEKAVLMSEQQQPPREEFQIPTLGSSG 494
           GTCPY+TNCNFAHSI+ELRRPPPNWQEIVAAH+EE+ V        PREEFQIP++GSS 
Sbjct: 114 GTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGV-----SSEPREEFQIPSIGSSS 168

Query: 493 FAGDMTQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAI 356
           F G  TQRSYKGRHCKKFYT+EGCPYGD+CTFLHDEQSK RESVAI
Sbjct: 169 F-GVETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAI 213



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = -1

Query: 155 TNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGPLEGENRD 3
           +N KPSNWKTRICNKWE+TGYCPFG+KCHFAHG  ELHRYGGG L  E+RD
Sbjct: 240 SNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGELHRYGGG-LVDESRD 289


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