BLASTX nr result

ID: Glycyrrhiza24_contig00002677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002677
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   109   7e-22
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   100   3e-19
ref|XP_569577.1| DNA repair and recombination protein pif1, mito...    86   8e-15
ref|XP_776511.1| hypothetical protein CNBC4370 [Cryptococcus neo...    86   8e-15
gb|AFR97989.1| DNA repair and recombination protein pif1 [Crypto...    86   1e-14

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  109 bits (272), Expect = 7e-22
 Identities = 58/109 (53%), Positives = 70/109 (64%)
 Frame = +3

Query: 429 PRIQWTEEQKSVLSAVTQGSSVFITGSAGTGXXXXXXXXXXXXXXXHTKSKVFVTASTGV 608
           P  +W +EQK++ S V +G+SVFITGSAGTG               H KSKVFVTASTG+
Sbjct: 51  PLFEWAQEQKNIFSHVHRGASVFITGSAGTGKTVLLKHIIDILKDVHGKSKVFVTASTGI 110

Query: 609 AAFAIKGQTLHSFGGIPYTTIDDPEKLLDKIRFNKKASSRWKKVEALVI 755
           AA A++GQTLHSF  I     D    LLDK++ NK A  RWKK +ALVI
Sbjct: 111 AACALQGQTLHSFASIGIQNADS-GTLLDKVKMNKHACKRWKKAKALVI 158


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  100 bits (249), Expect = 3e-19
 Identities = 55/109 (50%), Positives = 66/109 (60%)
 Frame = +3

Query: 429 PRIQWTEEQKSVLSAVTQGSSVFITGSAGTGXXXXXXXXXXXXXXXHTKSKVFVTASTGV 608
           PRI+WTEE K +L  V +G SVFITGSAGTG               H  S V VTASTG 
Sbjct: 36  PRIKWTEEHKGILDYVIRGKSVFITGSAGTGKTVLLGHIISILKRAHGSSGVVVTASTGS 95

Query: 609 AAFAIKGQTLHSFGGIPYTTIDDPEKLLDKIRFNKKASSRWKKVEALVI 755
           AA AIKGQTLHSF G       DP+ LL+++  N +A  RW +V+ LV+
Sbjct: 96  AACAIKGQTLHSFAGFGIGD-GDPKALLERVVRNSRACKRWNQVKVLVV 143


>ref|XP_569577.1| DNA repair and recombination protein pif1, mitochondrial precursor
           [Cryptococcus neoformans var. neoformans JEC21]
           gi|57225809|gb|AAW42270.1| DNA repair and recombination
           protein pif1, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 669

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 432 RIQWTEEQKSVLSAVTQGS-SVFITGSAGTGXXXXXXXXXXXXXXXHTKSK--VFVTAST 602
           R+  +EEQ+ VLS V Q   +VF TGSAGTG               + ++   V VTAST
Sbjct: 196 RVTLSEEQQKVLSLVVQQQKNVFFTGSAGTGKSVLLREIIHSLRNKYARNPDAVAVTAST 255

Query: 603 GVAAFAIKGQTLHSFGGIPYTTIDDPEKLLDKIRFNKKASSRWKKVEALVI 755
           G+AA  I G TLHSFGG+   T D PE LL K++ NKKAS RW K + L+I
Sbjct: 256 GIAACNIGGVTLHSFGGVGLAT-DTPEILLRKLKMNKKASGRWTKTKVLII 305


>ref|XP_776511.1| hypothetical protein CNBC4370 [Cryptococcus neoformans var.
           neoformans B-3501A] gi|50259189|gb|EAL21864.1|
           hypothetical protein CNBC4370 [Cryptococcus neoformans
           var. neoformans B-3501A]
          Length = 669

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 432 RIQWTEEQKSVLSAVTQGS-SVFITGSAGTGXXXXXXXXXXXXXXXHTKSK--VFVTAST 602
           R+  +EEQ+ VLS V Q   +VF TGSAGTG               + ++   V VTAST
Sbjct: 196 RVTLSEEQQKVLSLVVQQQKNVFFTGSAGTGKSVLLREIIHSLRNKYARNPDAVAVTAST 255

Query: 603 GVAAFAIKGQTLHSFGGIPYTTIDDPEKLLDKIRFNKKASSRWKKVEALVI 755
           G+AA  I G TLHSFGG+   T D PE LL K++ NKKAS RW K + L+I
Sbjct: 256 GIAACNIGGVTLHSFGGVGLAT-DTPEILLRKLKMNKKASGRWTKTKVLII 305


>gb|AFR97989.1| DNA repair and recombination protein pif1 [Cryptococcus neoformans
           var. grubii H99]
          Length = 669

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 432 RIQWTEEQKSVLSAVTQGS-SVFITGSAGTGXXXXXXXXXXXXXXXHTKSK--VFVTAST 602
           R+  +EEQ+ VL+ V Q   +VF TGSAGTG               + K+   V VTAST
Sbjct: 196 RVTLSEEQQKVLTLVIQQQKNVFFTGSAGTGKSVLLREIIHGLRNKYAKNPDAVAVTAST 255

Query: 603 GVAAFAIKGQTLHSFGGIPYTTIDDPEKLLDKIRFNKKASSRWKKVEALVI 755
           G+AA  I G TLHSFGG+   T D PE LL K++ NKKAS RW K + L+I
Sbjct: 256 GIAACNIGGVTLHSFGGVGLAT-DTPEILLRKLKLNKKASGRWTKTKVLII 305


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