BLASTX nr result

ID: Glycyrrhiza24_contig00002674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002674
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531332.1| PREDICTED: 60S acidic ribosomal protein P3-l...   112   4e-23
ref|NP_001235337.1| uncharacterized protein LOC100527385 [Glycin...   110   9e-23
gb|ACU19318.1| unknown [Glycine max]                                  110   1e-22
gb|AFK33419.1| unknown [Lotus japonicus]                              109   3e-22
gb|AFK46812.1| unknown [Medicago truncatula]                          102   3e-20

>ref|XP_003531332.1| PREDICTED: 60S acidic ribosomal protein P3-like [Glycine max]
          Length = 120

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/72 (80%), Positives = 60/72 (83%)
 Frame = +3

Query: 108 MGVFTFVLRNSGGEWTAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQXXXXXXXX 287
           MGVFTFV+R SG EW+AKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQ        
Sbjct: 1   MGVFTFVVRKSGSEWSAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVSP 60

Query: 288 XXAVFQVIVGGA 323
             AVFQVIVGGA
Sbjct: 61  TSAVFQVIVGGA 72


>ref|NP_001235337.1| uncharacterized protein LOC100527385 [Glycine max]
           gi|255632230|gb|ACU16473.1| unknown [Glycine max]
          Length = 125

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/72 (79%), Positives = 60/72 (83%)
 Frame = +3

Query: 108 MGVFTFVLRNSGGEWTAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQXXXXXXXX 287
           MGVFTFV+R SG EW+AKQHSGDIEASADST+DLQRKLVQAALAVDSSGGVQ        
Sbjct: 1   MGVFTFVVRKSGAEWSAKQHSGDIEASADSTYDLQRKLVQAALAVDSSGGVQSSFSPVSP 60

Query: 288 XXAVFQVIVGGA 323
             AVFQVIVGGA
Sbjct: 61  TSAVFQVIVGGA 72


>gb|ACU19318.1| unknown [Glycine max]
          Length = 119

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/72 (79%), Positives = 60/72 (83%)
 Frame = +3

Query: 108 MGVFTFVLRNSGGEWTAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQXXXXXXXX 287
           MGVFTFV+R SG EW+AKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQ        
Sbjct: 1   MGVFTFVVRKSGSEWSAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVSP 60

Query: 288 XXAVFQVIVGGA 323
             AVF+VIVGGA
Sbjct: 61  TSAVFRVIVGGA 72


>gb|AFK33419.1| unknown [Lotus japonicus]
          Length = 121

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/72 (79%), Positives = 59/72 (81%)
 Frame = +3

Query: 108 MGVFTFVLRNSGGEWTAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQXXXXXXXX 287
           MGVFTFVLRNSGG+W AKQHSG IEASADSTF LQRKL+QAALAVDSSGGVQ        
Sbjct: 1   MGVFTFVLRNSGGDWFAKQHSGGIEASADSTFALQRKLIQAALAVDSSGGVQSSYSPVSP 60

Query: 288 XXAVFQVIVGGA 323
             AVFQVIVGGA
Sbjct: 61  TSAVFQVIVGGA 72


>gb|AFK46812.1| unknown [Medicago truncatula]
          Length = 119

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/72 (70%), Positives = 58/72 (80%)
 Frame = +3

Query: 108 MGVFTFVLRNSGGEWTAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQXXXXXXXX 287
           MGVFTFVL  +G EWTAKQ+SGDIEASA+STF++QRKLVQAALAVDS+GGVQ        
Sbjct: 1   MGVFTFVLNKTGAEWTAKQYSGDIEASAESTFEIQRKLVQAALAVDSNGGVQSSYSPISP 60

Query: 288 XXAVFQVIVGGA 323
              VFQV+VGGA
Sbjct: 61  SSGVFQVVVGGA 72


Top