BLASTX nr result

ID: Glycyrrhiza24_contig00002671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002671
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608916.1| Ultraviolet N-glycosylase/AP lyase [Medicago...   419   e-115
ref|XP_003525486.1| PREDICTED: endonuclease III-like [Glycine max]    419   e-115
ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis...   370   e-100
ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|2...   349   4e-94
emb|CBI15085.3| unnamed protein product [Vitis vinifera]              334   2e-89

>ref|XP_003608916.1| Ultraviolet N-glycosylase/AP lyase [Medicago truncatula]
           gi|355509971|gb|AES91113.1| Ultraviolet N-glycosylase/AP
           lyase [Medicago truncatula]
          Length = 280

 Score =  419 bits (1077), Expect = e-115
 Identities = 199/230 (86%), Positives = 213/230 (92%)
 Frame = -2

Query: 690 NPKDPFPSHSRPTPQECLAVRDTLLALHGVPPELAKYRKLQPTNDTEEPPETVLDGLVRT 511
           NPK+PFPSHS PTPQECL +RD LL+LHG+PPELAKYRK Q TNDT EPPETVLDGLVRT
Sbjct: 31  NPKNPFPSHSAPTPQECLEIRDNLLSLHGIPPELAKYRKSQQTNDTVEPPETVLDGLVRT 90

Query: 510 VLSQNTTEANSYKAFASLKSSFPTWEHVLGAEHKDVENAIRCGGLAPTKASCIKNVLRCL 331
           +LSQNTTEANS KAFASLKS FPTWEHV GAE K++ENAIRCGGLAPTKA CIKN+L CL
Sbjct: 91  ILSQNTTEANSNKAFASLKSLFPTWEHVHGAESKELENAIRCGGLAPTKAKCIKNLLSCL 150

Query: 330 LERRGKLCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLMFNLQQDDFPVDTHIFEIAKT 151
           LER+GK+CLEYLRDLSVDEVKAELSLFKGIGPKTV+CVLMFNLQ DDFPVDTHIFEIAKT
Sbjct: 151 LERKGKMCLEYLRDLSVDEVKAELSLFKGIGPKTVSCVLMFNLQLDDFPVDTHIFEIAKT 210

Query: 150 IGWVPAVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKHCRKCSSKRGNQ 1
           +GWVPA ADRNKTYLHLNQRIP+ELKFDLNCLLYTHGK C  CSSKRGN+
Sbjct: 211 MGWVPAAADRNKTYLHLNQRIPDELKFDLNCLLYTHGKLCSNCSSKRGNK 260


>ref|XP_003525486.1| PREDICTED: endonuclease III-like [Glycine max]
          Length = 284

 Score =  419 bits (1076), Expect = e-115
 Identities = 207/250 (82%), Positives = 223/250 (89%), Gaps = 2/250 (0%)
 Frame = -2

Query: 744 PKSLSVRVGPIPSRSENPNPKDPFPSHSRPTPQECLAVRDTLLALHGVPPELAKYRKLQP 565
           PK  SVR G     +   N KDPFPSH+RPTPQEC AVRDTLLALHG+PPELAKYRKL P
Sbjct: 17  PKPKSVRAGS----TRTDNVKDPFPSHARPTPQECEAVRDTLLALHGIPPELAKYRKLPP 72

Query: 564 TNDTEE--PPETVLDGLVRTVLSQNTTEANSYKAFASLKSSFPTWEHVLGAEHKDVENAI 391
           +++  +  PPE VLDGLVRTVLSQNTTEANS KAFASLKSSFP+WE VL AE KDVENAI
Sbjct: 73  SDEPVQLQPPEPVLDGLVRTVLSQNTTEANSQKAFASLKSSFPSWEQVLWAESKDVENAI 132

Query: 390 RCGGLAPTKASCIKNVLRCLLERRGKLCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLM 211
           RCGGLAPTKASCIKNVLRCL ERRG+LCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLM
Sbjct: 133 RCGGLAPTKASCIKNVLRCLRERRGELCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLM 192

Query: 210 FNLQQDDFPVDTHIFEIAKTIGWVPAVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKHC 31
           FNLQQDDFPVDTHIFEIAKT+GWVPAVA+RNK+YLHLNQR+PNELKFDLNCLLYTHGK C
Sbjct: 193 FNLQQDDFPVDTHIFEIAKTMGWVPAVANRNKSYLHLNQRVPNELKFDLNCLLYTHGKLC 252

Query: 30  RKCSSKRGNQ 1
            +CS K+GN+
Sbjct: 253 HQCSGKKGNK 262


>ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
           gi|223550571|gb|EEF52058.1| Endonuclease III, putative
           [Ricinus communis]
          Length = 291

 Score =  370 bits (950), Expect = e-100
 Identities = 175/245 (71%), Positives = 203/245 (82%), Gaps = 9/245 (3%)
 Frame = -2

Query: 708 SRSENPNPKDPFPSHSRPTPQECLAVRDTLLALHGVPPELAKYRKLQPTND--------- 556
           ++  N N ++P+P+H RPTP+ECL +RD+LLA HG P E AKYRK +   D         
Sbjct: 19  AKINNGNKEEPYPTHPRPTPEECLCIRDSLLAFHGFPQEFAKYRKQRLGGDDDNKSSDVN 78

Query: 555 TEEPPETVLDGLVRTVLSQNTTEANSYKAFASLKSSFPTWEHVLGAEHKDVENAIRCGGL 376
           ++   ETVLDGLV+TVLSQNTTE NS +AF +LKS FPTW+ VL AE K +ENAIRCGGL
Sbjct: 79  SDTAEETVLDGLVKTVLSQNTTEVNSQRAFDNLKSDFPTWQDVLAAEPKWIENAIRCGGL 138

Query: 375 APTKASCIKNVLRCLLERRGKLCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLMFNLQQ 196
           AP KASCIKN+L CLLE++GK+CLEYLRD+SVDE+KAELS FKG+GPKTVACVLMF+LQQ
Sbjct: 139 APAKASCIKNILNCLLEKKGKICLEYLRDMSVDEIKAELSQFKGVGPKTVACVLMFHLQQ 198

Query: 195 DDFPVDTHIFEIAKTIGWVPAVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKHCRKCSS 16
           +DFPVDTH+FEIAK +GWVP VADRNKTYLHLNQRIPNELKFDLNCLLYTHGK CRKC  
Sbjct: 199 EDFPVDTHVFEIAKALGWVPEVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKLCRKCIK 258

Query: 15  KRGNQ 1
           KRGNQ
Sbjct: 259 KRGNQ 263


>ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|222868560|gb|EEF05691.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  349 bits (896), Expect = 4e-94
 Identities = 172/263 (65%), Positives = 200/263 (76%), Gaps = 31/263 (11%)
 Frame = -2

Query: 696 NPNPKDPFPSHSRPTPQECLAVRDTLLALHGVPPELAKYRKLQP----TNDTEEPP---- 541
           N   ++PFP+H+RPTP+EC A+RD+LLA HG P E AKYRK +P      D EE P    
Sbjct: 27  NIKEEEPFPTHARPTPEECRAIRDSLLAFHGFPQEFAKYRKQRPYLITLQDKEESPHLIN 86

Query: 540 -----------------------ETVLDGLVRTVLSQNTTEANSYKAFASLKSSFPTWEH 430
                                  E+ LDGLV+TVLSQNTTE NS +AF +LKS+FPTWE+
Sbjct: 87  NCDGKNDNVVKVEEEEEEEEEEEESALDGLVKTVLSQNTTEVNSQRAFLNLKSAFPTWEN 146

Query: 429 VLGAEHKDVENAIRCGGLAPTKASCIKNVLRCLLERRGKLCLEYLRDLSVDEVKAELSLF 250
           VL AE K +E+AIRCGGLAPTKA+CI+N+L  L+E++G+LCLEYLRDL V E+KAELS F
Sbjct: 147 VLAAESKFIEDAIRCGGLAPTKAACIRNILSSLMEKKGRLCLEYLRDLPVAEIKAELSHF 206

Query: 249 KGIGPKTVACVLMFNLQQDDFPVDTHIFEIAKTIGWVPAVADRNKTYLHLNQRIPNELKF 70
           KGIGPKTVACVLMFNLQ+DDFPVDTH+FEIAK IGWVP VADRNKTYLHLN RIP ELKF
Sbjct: 207 KGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKAIGWVPPVADRNKTYLHLNHRIPKELKF 266

Query: 69  DLNCLLYTHGKHCRKCSSKRGNQ 1
           DLNCLLYTHGK CRKC+ K G+Q
Sbjct: 267 DLNCLLYTHGKLCRKCTKKSGSQ 289


>emb|CBI15085.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  334 bits (856), Expect = 2e-89
 Identities = 166/254 (65%), Positives = 189/254 (74%), Gaps = 27/254 (10%)
 Frame = -2

Query: 681 DPFPSHSRPTPQECLAVRDTLLALHGVPPELAKYRKLQ--PTNDTEEP------------ 544
           DP+PSH RPTP EC AVRD LLALHG P    KYRKL+  P   T  P            
Sbjct: 31  DPYPSHPRPTPVECRAVRDDLLALHGFPQRFEKYRKLRLPPLPHTSSPGLDGGGGTPVKL 90

Query: 543 -------------PETVLDGLVRTVLSQNTTEANSYKAFASLKSSFPTWEHVLGAEHKDV 403
                         E+VLDGLV  +LSQNTT+ NS +AFASLKS+FPTW+ VL A+ K +
Sbjct: 91  DPSDGDDVNGSSQKESVLDGLVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSI 150

Query: 402 ENAIRCGGLAPTKASCIKNVLRCLLERRGKLCLEYLRDLSVDEVKAELSLFKGIGPKTVA 223
           ENAIRCGGLA TKASCIK +L CLLER+GKLCLEYLRDL+VDE+K ELS FKGIGPKTVA
Sbjct: 151 ENAIRCGGLAVTKASCIKKMLSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVA 210

Query: 222 CVLMFNLQQDDFPVDTHIFEIAKTIGWVPAVADRNKTYLHLNQRIPNELKFDLNCLLYTH 43
           CVLMF+LQ+DDFPVDTH+ +I K IGWVPAVADR K YLHLN+RIP+ELKFDLNCLL+TH
Sbjct: 211 CVLMFHLQRDDFPVDTHVIQIGKAIGWVPAVADRKKAYLHLNRRIPDELKFDLNCLLFTH 270

Query: 42  GKHCRKCSSKRGNQ 1
           GK C +C+ K  NQ
Sbjct: 271 GKLCHECTQKGANQ 284


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