BLASTX nr result

ID: Glycyrrhiza24_contig00002648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002648
         (2481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555332.1| PREDICTED: peroxisomal membrane protein PMP3...   510   e-142
gb|AFK47577.1| unknown [Lotus japonicus]                              501   e-139
ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier f...   434   e-119
ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115
ref|XP_004156069.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   421   e-115

>ref|XP_003555332.1| PREDICTED: peroxisomal membrane protein PMP34-like [Glycine max]
          Length = 320

 Score =  510 bits (1314), Expect = e-142
 Identities = 265/319 (83%), Positives = 279/319 (87%)
 Frame = +3

Query: 342  MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHHQRKYRRISDVLWEAIST 521
            MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQA HQRKY+RISDVLWEAIST
Sbjct: 1    MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAQHQRKYKRISDVLWEAIST 60

Query: 522  RQVLSLYQGLGTKNVQXXXXXXXXXXXXXXXKKLYLRKTGNKXXXXXXXXXXXXXXXVCT 701
            RQVLSLYQGLGTKNVQ               +K+YL+KTGNK               VCT
Sbjct: 61   RQVLSLYQGLGTKNVQSFISSFIYFYGYSYFRKMYLKKTGNKSIGTTANLIVATAAGVCT 120

Query: 702  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAFDGLGISILLTSNPSIQYTAYDQ 881
            IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEA+DGLGISILLT+NPSIQYTAYDQ
Sbjct: 121  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAYDGLGISILLTTNPSIQYTAYDQ 180

Query: 882  LKERLLKGKMSKRTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADTDD 1061
            LK+R+LKGK+S RT TKSSPEALSAF AFMLGAVSKCAAT LTYPAIRCKVMIQAA+++D
Sbjct: 181  LKQRILKGKISNRTGTKSSPEALSAFYAFMLGAVSKCAATILTYPAIRCKVMIQAAESED 240

Query: 1062 GKSTEAERKAQRTISGALYTIWKREGLLGFFNGLQAQILKTVLSSALLLMVKEKITKSTW 1241
             KSTEAERKAQRTISGALYTIWKREG+LGFF GLQAQILKTVLSSALLLMVKEKI KSTW
Sbjct: 241  DKSTEAERKAQRTISGALYTIWKREGILGFFKGLQAQILKTVLSSALLLMVKEKIAKSTW 300

Query: 1242 ILMLMIGRYLSVKPPKLKA 1298
            ILML+IGRYLSV  PKLKA
Sbjct: 301  ILMLVIGRYLSVNSPKLKA 319


>gb|AFK47577.1| unknown [Lotus japonicus]
          Length = 320

 Score =  501 bits (1290), Expect = e-139
 Identities = 261/320 (81%), Positives = 278/320 (86%)
 Frame = +3

Query: 342  MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHHQRKYRRISDVLWEAIST 521
            MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQA HQRKYR ISDVLWEAI+ 
Sbjct: 1    MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAKHQRKYRGISDVLWEAIAK 60

Query: 522  RQVLSLYQGLGTKNVQXXXXXXXXXXXXXXXKKLYLRKTGNKXXXXXXXXXXXXXXXVCT 701
            RQVLSL QGLGTKNVQ               K+LYL ++GNK               VCT
Sbjct: 61   RQVLSLCQGLGTKNVQSFVSSFIYFYGYSYFKRLYLIRSGNKNIGTVANLIAATAAGVCT 120

Query: 702  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAFDGLGISILLTSNPSIQYTAYDQ 881
            I+ITQPLDTA+SRMQTSEFGKSKG WK+LSEGTWSEAFDGL ISILLTSNPSIQYTA+DQ
Sbjct: 121  ILITQPLDTAASRMQTSEFGKSKGFWKSLSEGTWSEAFDGLAISILLTSNPSIQYTAFDQ 180

Query: 882  LKERLLKGKMSKRTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADTDD 1061
            LK+R+LK KMSK+TDTKSSPEALS+FSAFMLGAVSKCAATCLTYPAIRCKVMIQAAD+DD
Sbjct: 181  LKQRILKDKMSKKTDTKSSPEALSSFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADSDD 240

Query: 1062 GKSTEAERKAQRTISGALYTIWKREGLLGFFNGLQAQILKTVLSSALLLMVKEKITKSTW 1241
             K TEAERKAQRTISGALYTIW+REGLLG+FNGLQAQILKTVLSSALL+MVKEKITKS+W
Sbjct: 241  DKRTEAERKAQRTISGALYTIWRREGLLGYFNGLQAQILKTVLSSALLMMVKEKITKSSW 300

Query: 1242 ILMLMIGRYLSVKPPKLKAA 1301
            ILMLMIGR LSVK PKLKAA
Sbjct: 301  ILMLMIGRLLSVKHPKLKAA 320


>ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis
            vinifera] gi|297737006|emb|CBI26207.3| unnamed protein
            product [Vitis vinifera]
          Length = 319

 Score =  434 bits (1116), Expect = e-119
 Identities = 219/320 (68%), Positives = 258/320 (80%)
 Frame = +3

Query: 342  MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHHQRKYRRISDVLWEAIST 521
            M  D ESL EATSGA+G+LVSTT+LYPLDTCKTKYQAEV  HHQ+KYR ISDVLWEAIST
Sbjct: 1    MGFDTESLLEATSGAVGALVSTTILYPLDTCKTKYQAEVSGHHQQKYRNISDVLWEAIST 60

Query: 522  RQVLSLYQGLGTKNVQXXXXXXXXXXXXXXXKKLYLRKTGNKXXXXXXXXXXXXXXXVCT 701
             QVLSLYQGLGTKN+Q               K+LYL K+G K                CT
Sbjct: 61   NQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSGAKTIRTKANLIVAAAAGACT 120

Query: 702  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAFDGLGISILLTSNPSIQYTAYDQ 881
            +++TQPLDTASSRMQTS FGKSKGLWKTLSEGTW EAFDGLGIS+LLT+NPSIQYT +DQ
Sbjct: 121  VLMTQPLDTASSRMQTSAFGKSKGLWKTLSEGTWKEAFDGLGISLLLTANPSIQYTVFDQ 180

Query: 882  LKERLLKGKMSKRTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADTDD 1061
            LK RLLKGK+S +T T+SSPEALSAFSAF+LGAVSKC AT +TYPAIRCKVM+QAA++D+
Sbjct: 181  LKLRLLKGKLSNKTGTESSPEALSAFSAFVLGAVSKCIATTVTYPAIRCKVMLQAAESDE 240

Query: 1062 GKSTEAERKAQRTISGALYTIWKREGLLGFFNGLQAQILKTVLSSALLLMVKEKITKSTW 1241
              +T+ E + ++T+S  +Y+IWKREGLLGFF GL+AQILKTVLSSALLLM+KEKITK+TW
Sbjct: 241  DGTTK-EAQPRKTVSDTIYSIWKREGLLGFFKGLEAQILKTVLSSALLLMIKEKITKTTW 299

Query: 1242 ILMLMIGRYLSVKPPKLKAA 1301
            +++L + RYL+V   +LKAA
Sbjct: 300  VILLALRRYLTVNRTRLKAA 319


>ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  422 bits (1085), Expect = e-115
 Identities = 214/319 (67%), Positives = 253/319 (79%)
 Frame = +3

Query: 342  MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHHQRKYRRISDVLWEAIST 521
            M  DLESLSEATSGAIG+LVSTT+ YPLDTCKTKYQAEV+AHHQ+KYR ISDV WEAI++
Sbjct: 1    MAFDLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIAS 60

Query: 522  RQVLSLYQGLGTKNVQXXXXXXXXXXXXXXXKKLYLRKTGNKXXXXXXXXXXXXXXXVCT 701
            RQVLSLYQGLGTKN+Q               K+LYL K+ NK                CT
Sbjct: 61   RQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACT 120

Query: 702  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAFDGLGISILLTSNPSIQYTAYDQ 881
            +++TQPLDTASS+MQTSEFGKS+GLWKTLSEGTWSEAFDGLGIS+LLTSNPSIQYT +DQ
Sbjct: 121  VIVTQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180

Query: 882  LKERLLKGKMSKRTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADTDD 1061
            LK RLL+ ++SK++  +SSPEALSAFSAF+LGAVSKC ATC+TYPAIRCKV +QAA++D+
Sbjct: 181  LKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDE 240

Query: 1062 GKSTEAERKAQRTISGALYTIWKREGLLGFFNGLQAQILKTVLSSALLLMVKEKITKSTW 1241
             +  E + K  +TISGALY+IWK EG  GFF GL AQ LKTVLSSAL LM+KEKI+K+TW
Sbjct: 241  SEIEEVQAKT-KTISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTW 299

Query: 1242 ILMLMIGRYLSVKPPKLKA 1298
             LML + RYL V   ++K+
Sbjct: 300  FLMLALKRYLFVTRSRIKS 318


>ref|XP_004156069.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial substrate carrier
            family protein Q-like [Cucumis sativus]
          Length = 321

 Score =  421 bits (1083), Expect = e-115
 Identities = 217/321 (67%), Positives = 258/321 (80%), Gaps = 1/321 (0%)
 Frame = +3

Query: 342  MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHHQRKYRRISDVLWEAIST 521
            M  DLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAE Q+ HQRKYR ISDVLWEAIST
Sbjct: 1    MGFDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAENQSQHQRKYRNISDVLWEAIST 60

Query: 522  RQVLSLYQGLGTKNVQXXXXXXXXXXXXXXXKKLYLRKTGNKXXXXXXXXXXXXXXXVCT 701
             +V SLYQGLGTKN Q               K++YL+++GNK                CT
Sbjct: 61   GRVGSLYQGLGTKNFQSFISSFIYFYGYSFLKRIYLKRSGNKXIGTKANLIVAAAAGACT 120

Query: 702  IVITQPLDTASSRMQTSEFGKSKGLWKTLSEGTWSEAFDGLGISILLTSNPSIQYTAYDQ 881
            +V+TQPLDTASSRMQTSEFGKSKGLWKTL+EGTWSEAFDGLGIS+LLTSNPSIQYTA+DQ
Sbjct: 121  VVLTQPLDTASSRMQTSEFGKSKGLWKTLAEGTWSEAFDGLGISLLLTSNPSIQYTAFDQ 180

Query: 882  LKERLLKGKMSKRTDTKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADTDD 1061
            LK+RLL+ K++  + T+SSPEALSAFSAF+LGA+SKC AT LTYPAIRCK++IQAA++D 
Sbjct: 181  LKQRLLQTKLTHESGTESSPEALSAFSAFVLGALSKCVATILTYPAIRCKIVIQAAESDQ 240

Query: 1062 GKSTEAERKA-QRTISGALYTIWKREGLLGFFNGLQAQILKTVLSSALLLMVKEKITKST 1238
              + + ++   +++ISGAL TIWKREGLLGFF GL AQILKTVLSSALLLM+KEK+ K++
Sbjct: 241  ENNEDKQQHGDKKSISGALNTIWKREGLLGFFKGLNAQILKTVLSSALLLMIKEKVAKTS 300

Query: 1239 WILMLMIGRYLSVKPPKLKAA 1301
            WI++L + ++L     +LKAA
Sbjct: 301  WIILLALRKFLFPTNTRLKAA 321


Top