BLASTX nr result

ID: Glycyrrhiza24_contig00002632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002632
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E...   173   3e-41
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   173   3e-41
ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago ...   172   6e-41
gb|ACU15277.1| unknown [Glycine max]                                  172   8e-41
ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E...   171   1e-40

>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|356516401|ref|XP_003526883.1| PREDICTED: small
           nuclear ribonucleoprotein E [Glycine max]
           gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
          Length = 88

 Score =  173 bits (439), Expect = 3e-41
 Identities = 88/88 (100%), Positives = 88/88 (100%)
 Frame = +1

Query: 73  MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 252
           MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 253 NVKKKSRKTLGRILLKGDNITLMMNTGK 336
           NVKKKSRKTLGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  173 bits (438), Expect = 3e-41
 Identities = 87/88 (98%), Positives = 88/88 (100%)
 Frame = +1

Query: 73  MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 252
           MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 253 NVKKKSRKTLGRILLKGDNITLMMNTGK 336
           N+KKKSRKTLGRILLKGDNITLMMNTGK
Sbjct: 61  NIKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_003597961.1| Small nuclear ribonucleoprotein E [Medicago truncatula]
           gi|357491039|ref|XP_003615807.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|355487009|gb|AES68212.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|355517142|gb|AES98765.1| Small nuclear
           ribonucleoprotein E [Medicago truncatula]
           gi|388498322|gb|AFK37227.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  172 bits (436), Expect = 6e-41
 Identities = 87/88 (98%), Positives = 88/88 (100%)
 Frame = +1

Query: 73  MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 252
           MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 253 NVKKKSRKTLGRILLKGDNITLMMNTGK 336
           NVKKKS+KTLGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKKSKKTLGRILLKGDNITLMMNTGK 88


>gb|ACU15277.1| unknown [Glycine max]
          Length = 88

 Score =  172 bits (435), Expect = 8e-41
 Identities = 87/88 (98%), Positives = 87/88 (98%)
 Frame = +1

Query: 73  MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 252
           MASTKVQRVMTQPINLIFRFLQ KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQGKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 253 NVKKKSRKTLGRILLKGDNITLMMNTGK 336
           NVKKKSRKTLGRILLKGDNITLMMNTGK
Sbjct: 61  NVKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_004139778.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449444032|ref|XP_004139779.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
           gi|449502888|ref|XP_004161771.1| PREDICTED: small
           nuclear ribonucleoprotein E-like [Cucumis sativus]
          Length = 88

 Score =  171 bits (434), Expect = 1e-40
 Identities = 86/88 (97%), Positives = 88/88 (100%)
 Frame = +1

Query: 73  MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 252
           MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 253 NVKKKSRKTLGRILLKGDNITLMMNTGK 336
           NVKKKSRKTLGRILLKGDNITLMMN+GK
Sbjct: 61  NVKKKSRKTLGRILLKGDNITLMMNSGK 88


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