BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002618
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicag...   560   e-157
ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   552   e-155
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   504   e-140
gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [A...   479   e-132
ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsi...   478   e-132

>ref|XP_003597926.1| Formamidopyrimidine-DNA glycosylase [Medicago truncatula]
            gi|355486974|gb|AES68177.1| Formamidopyrimidine-DNA
            glycosylase [Medicago truncatula]
          Length = 424

 Score =  560 bits (1444), Expect = e-157
 Identities = 302/432 (69%), Positives = 321/432 (74%), Gaps = 28/432 (6%)
 Frame = +2

Query: 23   MPELPEVEAARRAVEDNCVGKKIVKCVVADDSKVIDGVSRSEFEASVLGKTIVAARRKGK 202
            MPELPEVEAARRAVE+NC+GKKI KC+VADD+KVIDGVSR EFEASV+GK IVAARRKGK
Sbjct: 1    MPELPEVEAARRAVEENCIGKKITKCIVADDNKVIDGVSREEFEASVVGKKIVAARRKGK 60

Query: 203  NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 382
            NMWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRSA+ DEDEWPSKYSKFFIQLDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEL 120

Query: 383  SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 562
            SFTDKRRFARVRLLKDPTSVPPISELGPDAL + MTL+EFTE L KKKTEIKALLLDQ Y
Sbjct: 121  SFTDKRRFARVRLLKDPTSVPPISELGPDALFDFMTLDEFTERLHKKKTEIKALLLDQSY 180

Query: 563  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKA-------------- 700
            ISGIGNWVADEVLYQARIHPRQ+ASSLSGESCSTLYKCIKEVI+ A              
Sbjct: 181  ISGIGNWVADEVLYQARIHPRQIASSLSGESCSTLYKCIKEVIQFAVEVDADCSRFPLEW 240

Query: 701  --------------VEVGADSSQYPTSWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYV 838
                          VEVGADSSQYPT+WIFHSREKKPGKAFVDGK I+FITAGGRTTAYV
Sbjct: 241  LFHFRWGKKPGKISVEVGADSSQYPTNWIFHSREKKPGKAFVDGKTIEFITAGGRTTAYV 300

Query: 839  PELQKLSGSQDVKETGXXXXXXXXXXXXVNDDNNDDIEKPTEVEDENXXXXXXXXXXXXX 1018
            PELQKLSGSQ +KETG            V+DDNND         DEN             
Sbjct: 301  PELQKLSGSQVLKETG-KLRGKASKKSSVDDDNNDG-------ADENLESLKSKKGTKAG 352

Query: 1019 XXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXEQVEKKPGQVTNRKQAKGEKQSKKRVQG 1198
                          S                 +  +KKPG  TNRKQAKGEKQSKK VQG
Sbjct: 353  AKAKKPSKRKKTEESDDDNDGDAGTDNYDDSDQVEKKKPGSGTNRKQAKGEKQSKKSVQG 412

Query: 1199 SQNGRSTRSKAK 1234
            +Q+ RSTRSKAK
Sbjct: 413  NQSSRSTRSKAK 424


>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  552 bits (1422), Expect = e-155
 Identities = 295/405 (72%), Positives = 314/405 (77%), Gaps = 1/405 (0%)
 Frame = +2

Query: 23   MPELPEVEAARRAVEDNCVGKKIVKCVVADDSKVIDGVSRSEFEASVLGKTIVAARRKGK 202
            MPELPEVEAARRAVE NCVGK+I KCVVADDSKVI GVS S+F+ASVLGK IVAA RKGK
Sbjct: 1    MPELPEVEAARRAVEYNCVGKRITKCVVADDSKVIHGVSPSDFQASVLGKLIVAAHRKGK 60

Query: 203  NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 382
            NMWLQLDSPPFPSFQFGMAGAIYIKG AVT YKRSA+KDEDEWPSKYSK FI+LDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAIYIKGAAVTNYKRSAVKDEDEWPSKYSKIFIELDDGLEL 120

Query: 383  SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 562
            SFTDKRRFA+VRLLKDPTSVPPISELGPDAL EPMTLE+FTESL KKKTEIKALLLDQ +
Sbjct: 121  SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLEKFTESLHKKKTEIKALLLDQSF 180

Query: 563  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 742
            ISGIGNWVADEVLYQARIHPRQVASSLS ESCS L KCIKEVIEKA+EVGA+SSQYPT+W
Sbjct: 181  ISGIGNWVADEVLYQARIHPRQVASSLSNESCSNLSKCIKEVIEKAIEVGAESSQYPTNW 240

Query: 743  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXX 922
            IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGS DVKETG            
Sbjct: 241  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSLDVKETGKPNKRQASKKVR 300

Query: 923  VNDDNNDDIEKPTEVEDENXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXX 1102
            V+DD     EKPT  E ++                           S             
Sbjct: 301  VDDDT----EKPTNGEVDDLGSVKSKKGTKAGAKGRKPSKKKKSGGS--DEDKDSSDVGT 354

Query: 1103 XXXXEQVEKK-PGQVTNRKQAKGEKQSKKRVQGSQNGRSTRSKAK 1234
                +QVEKK PG V +RKQA GEKQS +RVQ +Q   S + KAK
Sbjct: 355  DYDSDQVEKKNPGNVASRKQAGGEKQSNRRVQSNQTSWSAKRKAK 399


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis vinifera]
          Length = 403

 Score =  504 bits (1298), Expect = e-140
 Identities = 262/403 (65%), Positives = 304/403 (75%), Gaps = 6/403 (1%)
 Frame = +2

Query: 23   MPELPEVEAARRAVEDNCVGKKIVKCVVADDSKVIDGVSRSEFEASVLGKTIVAARRKGK 202
            MPELPEVEAARRAVE++CVGKKI K V+A+DSKVIDGVS S+FEAS+LGKTIV+A RKGK
Sbjct: 1    MPELPEVEAARRAVEEHCVGKKITKAVIANDSKVIDGVSPSDFEASLLGKTIVSAHRKGK 60

Query: 203  NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 382
            NMWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRSA+KD DEWPSKYSK FI+LDDGLEL
Sbjct: 61   NMWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEL 120

Query: 383  SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 562
            SFTDKRRFA+VRLL+DP SVPPISELGPDAL EPMT++EF +SL KKK  IKALLLDQ Y
Sbjct: 121  SFTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSY 180

Query: 563  ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 742
            I+GIGNW+ADEVLY ARIHP QVASSL+ ESC TL++CIK+VIEKA+EVGADSSQ+P++W
Sbjct: 181  IAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVIEKAMEVGADSSQFPSNW 240

Query: 743  IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXX 922
            IFHSREKKPGKAFVDGKKIDFI+AGGRTTAYVPELQKLSG+Q  K +             
Sbjct: 241  IFHSREKKPGKAFVDGKKIDFISAGGRTTAYVPELQKLSGTQAAKASVKPRKQTPMRKKE 300

Query: 923  VNDDNNDD---IEKPTEVEDENXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXX 1093
             ND+++DD   +++P   E++N                           S          
Sbjct: 301  ENDEDDDDDDALDEPASEEEKNTKRAKSKKGQNPKGGGKKPPAKRKVEESDNDSDDNDDN 360

Query: 1094 XXXXXXXEQV---EKKPGQVTNRKQAKGEKQSKKRVQGSQNGR 1213
                   E     +KK  +VT  KQ K EK +KK+V+ S  G+
Sbjct: 361  NDDDDDDEDKDGDQKKAKRVTKNKQTKVEKTTKKKVEKSHKGK 403


>gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score =  479 bits (1232), Expect = e-132
 Identities = 235/319 (73%), Positives = 273/319 (85%)
 Frame = +2

Query: 23  MPELPEVEAARRAVEDNCVGKKIVKCVVADDSKVIDGVSRSEFEASVLGKTIVAARRKGK 202
           MPELPEVEAARRA+E+NC+GKKI + ++ADD+KVI G+S S+F+ S+LGKTI++ARRKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 203 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 382
           N+WL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRSA+KD +EWPSKYSKFF++LDDGLEL
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 383 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 562
           SFTDKRRFA+VRLL +PTSV PISELGPDAL EPMT++EF ESL KKK  IK LLLDQGY
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 563 ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 742
           ISGIGNW+ADEVLYQARIHP Q ASSLS E C  L+  IKEVIEKAVEV ADSSQ+P++W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSNW 240

Query: 743 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXX 922
           IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G +D ++              
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG-KDAEKAAKVRPAKRGVKPK 299

Query: 923 VNDDNNDDIEKPTEVEDEN 979
            +D + ++ E+ TE EDE+
Sbjct: 300 EDDGDGEEDEQETEKEDES 318


>ref|NP_564608.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
           gi|5903053|gb|AAD55612.1|AC008016_22 Identical to
           gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
           glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
           comes from this gene [Arabidopsis thaliana]
           gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis
           thaliana] gi|195947437|gb|ACG58696.1| At1g52500
           [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1|
           formamidopyrimidine-DNA glycosylase [Arabidopsis
           thaliana]
          Length = 390

 Score =  478 bits (1229), Expect = e-132
 Identities = 235/319 (73%), Positives = 272/319 (85%)
 Frame = +2

Query: 23  MPELPEVEAARRAVEDNCVGKKIVKCVVADDSKVIDGVSRSEFEASVLGKTIVAARRKGK 202
           MPELPEVEAARRA+E+NC+GKKI + ++ADD+KVI G+S S+F+ S+LGKTI++ARRKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 203 NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAIKDEDEWPSKYSKFFIQLDDGLEL 382
           N+WL+LDSPPFPSFQFGMAGAIYIKGVAVTKYKRSA+KD +EWPSKYSKFF++LDDGLEL
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 383 SFTDKRRFARVRLLKDPTSVPPISELGPDALSEPMTLEEFTESLRKKKTEIKALLLDQGY 562
           SFTDKRRFA+VRLL +PTSV PISELGPDAL EPMT++EF ESL KKK  IK LLLDQGY
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 563 ISGIGNWVADEVLYQARIHPRQVASSLSGESCSTLYKCIKEVIEKAVEVGADSSQYPTSW 742
           ISGIGNW+ADEVLYQARIHP Q ASSLS E C  L+  IKEVIEKAVEV ADSSQ+P+ W
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW 240

Query: 743 IFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLSGSQDVKETGXXXXXXXXXXXX 922
           IFH+REKKPGKAFVDGKKIDFITAGGRTTAYVPELQKL G +D ++              
Sbjct: 241 IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYG-KDAEKAAKVRPAKRGVKPK 299

Query: 923 VNDDNNDDIEKPTEVEDEN 979
            +D + ++ E+ TE EDE+
Sbjct: 300 EDDGDGEEDEQETEKEDES 318