BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002600
         (3985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like...  1956   0.0  
ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncat...  1925   0.0  
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...  1912   0.0  
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...  1907   0.0  
ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2...  1862   0.0  

>ref|XP_003541702.1| PREDICTED: splicing factor 3B subunit 1-like [Glycine max]
          Length = 1172

 Score = 1956 bits (5066), Expect = 0.0
 Identities = 995/1090 (91%), Positives = 1009/1090 (92%), Gaps = 7/1090 (0%)
 Frame = +2

Query: 491  QQQQKRRNRWDQSQDDG------AAKKAKTSDWDMPDTTPGRWDATPTPGRVT-ATPGRR 649
            QQQQKRRNRWDQSQDDG      AAKKAKTSDWDMPDTTPGRWDATPTPGRVT ATPGRR
Sbjct: 84   QQQQKRRNRWDQSQDDGGAAAAAAAKKAKTSDWDMPDTTPGRWDATPTPGRVTDATPGRR 143

Query: 650  NRWDETPTPGRLVDSDXXXXXXXXXXXXXXXXXWDATPKLSGMATPTPKRQRSRWDETPA 829
            NRWDETPTPGR+ DSD                 WDATPKLSGMATPTPKRQRSRWDETPA
Sbjct: 144  NRWDETPTPGRVADSDATPAGGATPGATPAGMTWDATPKLSGMATPTPKRQRSRWDETPA 203

Query: 830  TMGSXXXXXXXXXXXXXXXXXXXXGGVELATPTPGALHPGAITPEQYNLLRWERDIEERN 1009
            TMGS                    GG+ELATPTPGAL  G+ITPEQYNLLRWERDIEERN
Sbjct: 204  TMGSATPLPGATPAAAYTPGVTPVGGIELATPTPGALQ-GSITPEQYNLLRWERDIEERN 262

Query: 1010 RPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKXXXXXXXXXXXXYQIPEENRGQQFD 1189
            RPLTDEELDAMFPQEGYK+LDPPASYVPIRTPARK            YQIPEENRGQQFD
Sbjct: 263  RPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFD 322

Query: 1190 VPREAPGGLPFMKPEDYQYFGAXXXXXXXXXXTPDEQKERKIMKLLLKVKNGTPPQRKTA 1369
            VP+EAPGGLPFMKPEDYQYFGA          +PDEQKERKIMKLLLKVKNGTPPQRKTA
Sbjct: 323  VPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTA 382

Query: 1370 LRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKIL 1549
            LRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKIL
Sbjct: 383  LRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKIL 442

Query: 1550 VVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVV 1729
            VVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVV
Sbjct: 443  VVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVV 502

Query: 1730 ASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLN 1909
            ASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLN
Sbjct: 503  ASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLN 562

Query: 1910 DENQKVRTITXXXXXXXXXXXXPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIP 2089
            DENQKVRTI+            PYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIP
Sbjct: 563  DENQKVRTISALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIP 622

Query: 2090 LMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFF 2269
            LMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEA+YIRNDILPEFF
Sbjct: 623  LMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFF 682

Query: 2270 RNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKV 2449
            +NFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKV
Sbjct: 683  KNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKV 742

Query: 2450 VTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICG 2629
            VTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICG
Sbjct: 743  VTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICG 802

Query: 2630 TIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSIL 2809
            TIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSIL
Sbjct: 803  TIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSIL 862

Query: 2810 GALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPARE 2989
            GALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPARE
Sbjct: 863  GALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPARE 922

Query: 2990 WMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTV 3169
            WMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTV
Sbjct: 923  WMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTV 982

Query: 3170 AIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLE 3349
            AIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLE
Sbjct: 983  AIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLE 1042

Query: 3350 DALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAI 3529
            DALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAI
Sbjct: 1043 DALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAI 1102

Query: 3530 EGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEQSNV 3709
            EGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVA+YP+LEDEQ+NV
Sbjct: 1103 EGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDEQNNV 1162

Query: 3710 YSRPELMMFI 3739
            YSRPELMMFI
Sbjct: 1163 YSRPELMMFI 1172



 Score = 76.6 bits (187), Expect = 5e-11
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +3

Query: 225 LNQVISPERHDAFAAGEKTPDPSVRTYADVMREEALKR 338
           LNQ+ISPERHD FAAGEKTPDPSVRTYAD+MREEALKR
Sbjct: 21  LNQIISPERHDPFAAGEKTPDPSVRTYADIMREEALKR 58


>ref|XP_003593224.1| Splicing factor 3B subunit [Medicago truncatula]
            gi|355482272|gb|AES63475.1| Splicing factor 3B subunit
            [Medicago truncatula]
          Length = 1378

 Score = 1925 bits (4987), Expect = 0.0
 Identities = 983/1090 (90%), Positives = 999/1090 (91%), Gaps = 6/1090 (0%)
 Frame = +2

Query: 485  QGQQQQKRRNRWDQSQ--DDGAAKKAKTSDWDMPDT---TPGRWDATPTPGRVT-ATPGR 646
            Q  QQQKRRNRWDQ+Q  ++G  KK+KTSDWD PD+   TPGRWDATPTPGRV  ATPGR
Sbjct: 175  QQNQQQKRRNRWDQNQNLEEGGVKKSKTSDWDAPDSNAMTPGRWDATPTPGRVVDATPGR 234

Query: 647  RNRWDETPTPGRLVDSDXXXXXXXXXXXXXXXXXWDATPKLSGMATPTPKRQRSRWDETP 826
            RNRWDETPTPGRLVDSD                 WDATPKLSG  TPTPKRQRSRWDETP
Sbjct: 235  RNRWDETPTPGRLVDSDATPGGVTPGGVTPGGATWDATPKLSGGITPTPKRQRSRWDETP 294

Query: 827  ATMGSXXXXXXXXXXXXXXXXXXXXGGVELATPTPGALHPGAITPEQYNLLRWERDIEER 1006
            ATMGS                    GGVELATPTPGAL  G+ TPEQYNLLRWERDIEER
Sbjct: 295  ATMGSVTPLPGATPAAAYTPGVTPVGGVELATPTPGALQ-GSFTPEQYNLLRWERDIEER 353

Query: 1007 NRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKXXXXXXXXXXXXYQIPEENRGQQF 1186
            NRPLTDEELDAMFPQEGYK+LDPPASYVPIRTPARK            YQIPEENRGQQF
Sbjct: 354  NRPLTDEELDAMFPQEGYKVLDPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQF 413

Query: 1187 DVPREAPGGLPFMKPEDYQYFGAXXXXXXXXXXTPDEQKERKIMKLLLKVKNGTPPQRKT 1366
            DVP+EAPGGLPFMKPEDYQYFGA          +PDEQKERKIMKLLLKVKNGTPPQRKT
Sbjct: 414  DVPKEAPGGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKT 473

Query: 1367 ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKI 1546
            ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKI
Sbjct: 474  ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKI 533

Query: 1547 LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV 1726
            LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV
Sbjct: 534  LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV 593

Query: 1727 VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL 1906
            VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL
Sbjct: 594  VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL 653

Query: 1907 NDENQKVRTITXXXXXXXXXXXXPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFII 2086
            NDENQKVRTIT            PYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFII
Sbjct: 654  NDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFII 713

Query: 2087 PLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEF 2266
            PLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEA+YIR DILPEF
Sbjct: 714  PLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTDILPEF 773

Query: 2267 FRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK 2446
            FRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK
Sbjct: 774  FRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK 833

Query: 2447 VVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQIC 2626
            VVTNLG+SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQIC
Sbjct: 834  VVTNLGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQIC 893

Query: 2627 GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI 2806
            GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI
Sbjct: 894  GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI 953

Query: 2807 LGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR 2986
            LGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR
Sbjct: 954  LGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR 1013

Query: 2987 EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT 3166
            EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT
Sbjct: 1014 EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT 1073

Query: 3167 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL 3346
            VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL
Sbjct: 1074 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL 1133

Query: 3347 EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA 3526
            EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA
Sbjct: 1134 EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA 1193

Query: 3527 IEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEQSN 3706
            IEGMRVALG+AV+LNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDE +N
Sbjct: 1194 IEGMRVALGSAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEHNN 1253

Query: 3707 VYSRPELMMF 3736
            VYSR ELM++
Sbjct: 1254 VYSRSELMIW 1263



 Score = 80.5 bits (197), Expect = 3e-12
 Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   YGGSDKDSYLTSIPXXXXXXXXXXXXXXVPRR-LASYTAPKSILKDMPSADNDADAGFRK 179
           YG SDK SY  SIP              +PRR   SYT    +   + ++++  D     
Sbjct: 34  YGDSDKASYFPSIPATEEEETHDAEV--IPRRNFQSYTG-HDVAVPINNSNDAGDNEVVT 90

Query: 180 PSXXXXXXXXXXXXXLNQVISPERHDAFAAGEKTPDPSVRTYADVMREEALKR 338
                          LNQ++SP+RHDAFAAGEKTPDPSVR+YAD+MR+EALKR
Sbjct: 91  SRRIIDREDDYRRRRLNQILSPDRHDAFAAGEKTPDPSVRSYADIMRDEALKR 143


>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
            gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
            factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score = 1912 bits (4954), Expect = 0.0
 Identities = 975/1084 (89%), Positives = 993/1084 (91%), Gaps = 4/1084 (0%)
 Frame = +2

Query: 500  QKRRNRWDQSQDDGAAKKAKTSDWDMPDTTPGRWDATPTPGRV-TATPG--RRNRWDETP 670
            QKRRNRWDQSQDDG AKKAKTSDWD+PDTTPGRWDATP  GRV  ATPG  RRNRWDETP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATP--GRVGDATPGVGRRNRWDETP 238

Query: 671  TPGRLVDSDXXXXXXXXXXXXXXXXXWDATPKLSGMATPTPKRQRSRWDETPATMGSXXX 850
            TPGRL D D                 WDATPKL+GMATPTPKRQRSRWDETPATMGS   
Sbjct: 239  TPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATP 298

Query: 851  XXXXXXXXXXXXXXXXXGGVELATPTPGALH-PGAITPEQYNLLRWERDIEERNRPLTDE 1027
                             GGVELATPTPGA++  G +TPEQYNL+RWERDIEERNRPLTDE
Sbjct: 299  MPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDE 358

Query: 1028 ELDAMFPQEGYKILDPPASYVPIRTPARKXXXXXXXXXXXXYQIPEENRGQQFDVPREAP 1207
            ELDAMFPQEGYKILDPPASYVPIRTPARK            Y IPEENRGQQFDVP+EAP
Sbjct: 359  ELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAP 418

Query: 1208 GGLPFMKPEDYQYFGAXXXXXXXXXXTPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 1387
            GGLPFMKPEDYQYFGA          +P+EQKERKIMKLLLKVKNGTPPQRKTALRQLTD
Sbjct: 419  GGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 478

Query: 1388 KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 1567
            KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL
Sbjct: 479  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 538

Query: 1568 LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 1747
            LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
Sbjct: 539  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 598

Query: 1748 PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 1927
            PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV
Sbjct: 599  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 658

Query: 1928 RTITXXXXXXXXXXXXPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALY 2107
            RTIT            PYGIESFDSVLKPLWKGIR HRGKVLAAFLKAIGFIIPLM+ALY
Sbjct: 659  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALY 718

Query: 2108 ASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR 2287
            A YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR
Sbjct: 719  ACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR 778

Query: 2288 RMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGA 2467
            RMALDRRNYKQLV+TTVEIANKVGVADIVGR+VEDLKDESEPYRRMVMETIEKVV NLGA
Sbjct: 779  RMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGA 838

Query: 2468 SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 2647
            SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL
Sbjct: 839  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 898

Query: 2648 NNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKSI 2827
            NNKSAKVRQQAADLISRIAVVMKQC EEQLMGHLGVVLYEYLGEEYPEVLGSILGALK+I
Sbjct: 899  NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 958

Query: 2828 VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 3007
            VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
Sbjct: 959  VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1018

Query: 3008 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA 3187
            ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA
Sbjct: 1019 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA 1078

Query: 3188 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 3367
            ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
Sbjct: 1079 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1138

Query: 3368 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 3547
            DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA
Sbjct: 1139 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1198

Query: 3548 LGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEQSNVYSRPEL 3727
            LGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVA+YP+LED ++NVYSRPEL
Sbjct: 1199 LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPEL 1258

Query: 3728 MMFI 3739
             MFI
Sbjct: 1259 AMFI 1262



 Score =  128 bits (321), Expect = 1e-26
 Identities = 67/113 (59%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   YGGSDKDSYLTSIPXXXXXXXXXXXXXXVPRRLASYTAPKSILKDMP-SADNDADAGFRK 179
           YGG+DK  Y+TSIP              V R+LASYTAPKS+LK+MP   D D D G++K
Sbjct: 32  YGGNDKAGYVTSIPVNEDDENLESQVNVVGRKLASYTAPKSLLKEMPRGVDEDEDLGYKK 91

Query: 180 PSXXXXXXXXXXXXXLNQVISPERHDAFAAGEKTPDPSVRTYADVMREEALKR 338
           P              LN+VISPERHDAFAAGEKTPDPSVRTYA+VMREEALKR
Sbjct: 92  PQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYAEVMREEALKR 144


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score = 1907 bits (4941), Expect = 0.0
 Identities = 974/1091 (89%), Positives = 999/1091 (91%), Gaps = 8/1091 (0%)
 Frame = +2

Query: 491  QQQQKRRNRWDQSQDDGAAKKAKT-SDWDMPDTTPG--RWDATPTPGRVT-ATPG--RRN 652
            Q  QKRRNRWDQSQDDG+AKKAKT SDWD+PD+TPG  RWDATPTPGRV  ATP   RRN
Sbjct: 181  QPTQKRRNRWDQSQDDGSAKKAKTGSDWDLPDSTPGIGRWDATPTPGRVADATPSISRRN 240

Query: 653  RWDETPTPGRLVDSDXXXXXXXXXXXXXXXXX-WDATPKLSGMATPTPKRQRSRWDETPA 829
            RWDETPTPGRL D+D                  WDATPKL+G+ATPTPKRQRSRWDETPA
Sbjct: 241  RWDETPTPGRLADADATPAAGGATPGATPAGMTWDATPKLAGLATPTPKRQRSRWDETPA 300

Query: 830  TMGSXXXXXXXXXXXXXXXXXXXXGGVELATPTPGALH-PGAITPEQYNLLRWERDIEER 1006
            TMGS                    GGVELATPTP A++  GAITPEQYNLLRWE+DIEER
Sbjct: 301  TMGSATPMAGATPAAAYTPGVTPVGGVELATPTPSAINLRGAITPEQYNLLRWEKDIEER 360

Query: 1007 NRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKXXXXXXXXXXXXYQIPEENRGQQF 1186
            NRPLTDEELDAMFPQEGYKILDPP SYVPIRTPARK            Y IPEENRGQQF
Sbjct: 361  NRPLTDEELDAMFPQEGYKILDPPPSYVPIRTPARKLLATPTPLGTPLYAIPEENRGQQF 420

Query: 1187 DVPREAPGGLPFMKPEDYQYFGAXXXXXXXXXXTPDEQKERKIMKLLLKVKNGTPPQRKT 1366
            DVP+EAPGGLPFMKPEDYQYFGA          +P+EQKERKIMKLLLKVKNGTPPQRKT
Sbjct: 421  DVPKEAPGGLPFMKPEDYQYFGALLNDEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKT 480

Query: 1367 ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKI 1546
            ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKI
Sbjct: 481  ALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKI 540

Query: 1547 LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV 1726
            LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV
Sbjct: 541  LVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSV 600

Query: 1727 VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL 1906
            VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL
Sbjct: 601  VASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGL 660

Query: 1907 NDENQKVRTITXXXXXXXXXXXXPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFII 2086
            NDENQKVRTIT            PYGIESFDSVLKPLWKGIR HRGKVLAAFLKAIGFII
Sbjct: 661  NDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFII 720

Query: 2087 PLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEF 2266
            PLM+A+YASYYTKEV+ ILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEF
Sbjct: 721  PLMDAIYASYYTKEVVFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEF 780

Query: 2267 FRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK 2446
            FRNFWVRRMALDRRNY+QLV+TTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK
Sbjct: 781  FRNFWVRRMALDRRNYRQLVDTTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEK 840

Query: 2447 VVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQIC 2626
            VV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVN+LGQRVKPYLPQIC
Sbjct: 841  VVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQIC 900

Query: 2627 GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI 2806
            GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI
Sbjct: 901  GTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPEVLGSI 960

Query: 2807 LGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR 2986
            LGALK+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR
Sbjct: 961  LGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAR 1020

Query: 2987 EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT 3166
            EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT
Sbjct: 1021 EWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTT 1080

Query: 3167 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL 3346
            VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL
Sbjct: 1081 VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLL 1140

Query: 3347 EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA 3526
            EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHL+NYVWPNIFETSPHVINAVMEA
Sbjct: 1141 EDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEA 1200

Query: 3527 IEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDEQSN 3706
            IEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYP LEDEQ+N
Sbjct: 1201 IEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPLLEDEQNN 1260

Query: 3707 VYSRPELMMFI 3739
            +YSRPEL+MFI
Sbjct: 1261 IYSRPELVMFI 1271



 Score =  108 bits (269), Expect = 2e-20
 Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = +3

Query: 3   YGGSDK-DSYLTSIPXXXXXXXXXXXXXXVPRRLASYTAPKSILKDMPSAD-NDADAGFR 176
           YGG++K + Y++SIP              + RRL SYTAP S+LK+MP     + D GF+
Sbjct: 35  YGGTNKFEDYVSSIPVNDEEENVDAMDPGLGRRLPSYTAPASLLKEMPRGGVEEDDMGFK 94

Query: 177 KPSXXXXXXXXXXXXXLNQVISPERHDAFAAGEKTPDPSVRTYADVMREEALKR 338
           KP              LN+VISP+RHDAFA+G+KTPD SVRTYADVMREEALKR
Sbjct: 95  KPQRIIDREDDYRRRRLNRVISPDRHDAFASGDKTPDVSVRTYADVMREEALKR 148


>ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1|
            predicted protein [Populus trichocarpa]
          Length = 1267

 Score = 1862 bits (4824), Expect = 0.0
 Identities = 953/1096 (86%), Positives = 988/1096 (90%), Gaps = 11/1096 (1%)
 Frame = +2

Query: 485  QGQQQQKRRNRWDQSQDDG--AAKKAKT-SDWDMPDTTPG--RWDATPTPGRV-TATPG- 643
            +     KRRNRWDQS +DG  AAKKAKT SDWD+PD TPG  RWDATPTPGR+  ATPG 
Sbjct: 174  ESNSMAKRRNRWDQSMEDGGNAAKKAKTGSDWDLPDATPGIGRWDATPTPGRIGDATPGA 233

Query: 644  -RRNRWDETPTPGRLVDSDXXXXXXXXXXXXXXXXXWDATPKLSGMATPTPKRQRSRWDE 820
             R+NRWDETPTPGR+ DSD                 WD+TPK  GM TPTPKRQ+SRWDE
Sbjct: 234  GRKNRWDETPTPGRVADSDATPAGGVTPGATPAGVTWDSTPK--GMVTPTPKRQKSRWDE 291

Query: 821  TPATMGSXXXXXXXXXXXXXXXXXXXX--GGVELATPTPGALHP-GAITPEQYNLLRWER 991
            TPA+M S                      G +++ATPTP AL   GAITPEQYNLLRWE+
Sbjct: 292  TPASMESATPALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPEQYNLLRWEK 351

Query: 992  DIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKXXXXXXXXXXXXYQIPEEN 1171
            DIEERNRPLTDEELDAMFPQEGYKIL+PPASYVPIRTPARK            Y IP+EN
Sbjct: 352  DIEERNRPLTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYSIPDEN 411

Query: 1172 RGQQFDVPREAPGGLPFMKPEDYQYFGAXXXXXXXXXXTPDEQKERKIMKLLLKVKNGTP 1351
            RGQQFD+ +E P GLPFMKPEDYQYFGA          +P+EQKERKIMKLLLKVKNGTP
Sbjct: 412  RGQQFDLGQEPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTP 471

Query: 1352 PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP 1531
            PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP
Sbjct: 472  PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP 531

Query: 1532 YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA 1711
            YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA
Sbjct: 532  YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA 591

Query: 1712 RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI 1891
            RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI
Sbjct: 592  RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI 651

Query: 1892 IEHGLNDENQKVRTITXXXXXXXXXXXXPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKA 2071
            IEHGLNDENQKVRTIT            PYGIESFDSVLKPLWKGIR HRGKVLAAFLKA
Sbjct: 652  IEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA 711

Query: 2072 IGFIIPLMEALYASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRND 2251
            IGFIIPLM+A+YA+YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVEA+YIR+D
Sbjct: 712  IGFIIPLMDAMYANYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRSD 771

Query: 2252 ILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVM 2431
            ILPEFF+NFWVRRMALDRRNY+QLVETTVEIANKVGV DIVGRIVEDLKDESEPYRRMVM
Sbjct: 772  ILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVKDIVGRIVEDLKDESEPYRRMVM 831

Query: 2432 ETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPY 2611
            ETIEKVVTN+G+SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPY
Sbjct: 832  ETIEKVVTNMGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPY 891

Query: 2612 LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHEEQLMGHLGVVLYEYLGEEYPE 2791
            LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQC EEQLMGHLGVVLYEYLGEEYPE
Sbjct: 892  LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPE 951

Query: 2792 VLGSILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE 2971
            VLGSILGALK+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 952  VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE 1011

Query: 2972 FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN 3151
            FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN
Sbjct: 1012 FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQN 1071

Query: 3152 RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA 3331
            RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA
Sbjct: 1072 RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYA 1131

Query: 3332 VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN 3511
            VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN
Sbjct: 1132 VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN 1191

Query: 3512 AVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLE 3691
            AVMEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIG+QDALVAAYP L+
Sbjct: 1192 AVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPILD 1251

Query: 3692 DEQSNVYSRPELMMFI 3739
            DEQ+N+YSRPELMMF+
Sbjct: 1252 DEQNNIYSRPELMMFV 1267



 Score =  113 bits (282), Expect = 5e-22
 Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
 Frame = +3

Query: 3   YGGSDKDSYLTSIPXXXXXXXXXXXXXXVPRRLASYTAPKSILKDMPSADNDADA--GFR 176
           YGG D+++Y TSIP              V ++LASYTAPKS+LK+MP   +D++   GFR
Sbjct: 32  YGGVDRNAYETSIPATDDEEPEVGLNE-VAQKLASYTAPKSVLKEMPRGGDDSEEVNGFR 90

Query: 177 KPSXXXXXXXXXXXXXLNQVISPERHDAFAAGEKTPDPSVRTYADVMREEALKR 338
           KPS             L+++ISPERHD F+AGEKTPDPSVRTY+D+M+EE+LKR
Sbjct: 91  KPSRIIDREDDYRRRRLDRIISPERHDPFSAGEKTPDPSVRTYSDIMKEESLKR 144