BLASTX nr result

ID: Glycyrrhiza24_contig00002588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002588
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537091.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   305   1e-80
ref|XP_002323400.1| predicted protein [Populus trichocarpa] gi|1...   294   3e-77
gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha cu...   293   6e-77
gb|ACV49920.1| ubiquitin-conjugating enzyme variant [Citrus sine...   291   2e-76
gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like ...   290   3e-76

>ref|XP_003537091.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like [Glycine
           max]
          Length = 201

 Score =  305 bits (782), Expect = 1e-80
 Identities = 149/166 (89%), Positives = 151/166 (90%), Gaps = 4/166 (2%)
 Frame = -1

Query: 904 FDSSDQIRSTHLCY----PSMTLGSGGSSVVVPRNFRXXXXXERGEKGIGDGTVSYGMDD 737
           FDS DQ R+THL      PSMTLG GGSSVVVPRNFR     ERGEKGIGDGTVSYGMDD
Sbjct: 36  FDSFDQTRNTHLTKTLRNPSMTLGLGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDD 95

Query: 736 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 557
           GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGV
Sbjct: 96  GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGV 155

Query: 556 VEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTCF 419
           VEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGT F
Sbjct: 156 VEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 201


>ref|XP_002323400.1| predicted protein [Populus trichocarpa] gi|118483820|gb|ABK93802.1|
           unknown [Populus trichocarpa]
           gi|222868030|gb|EEF05161.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  294 bits (752), Expect = 3e-77
 Identities = 139/146 (95%), Positives = 139/146 (95%)
 Frame = -1

Query: 856 MTLGSGGSSVVVPRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 677
           MT GSGGSSVVVPRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTFGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 676 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 497
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 120

Query: 496 ILTQLKKEMAAPHNRKLVQPPEGTCF 419
           ILTQLKKEMA PHNRKLVQPPEGTCF
Sbjct: 121 ILTQLKKEMAVPHNRKLVQPPEGTCF 146


>gb|ADU56174.1| ubiquitin-conjugating family protein [Jatropha curcas]
           gi|317159571|gb|ADV04060.1| protein
           binding/ubiquitin-protein ligase 1 [Hevea brasiliensis]
          Length = 146

 Score =  293 bits (749), Expect = 6e-77
 Identities = 140/146 (95%), Positives = 140/146 (95%)
 Frame = -1

Query: 856 MTLGSGGSSVVVPRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 677
           MTLGSGGSSVVVPRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 676 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 497
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 120

Query: 496 ILTQLKKEMAAPHNRKLVQPPEGTCF 419
           ILTQLKKEMAAPHNRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146


>gb|ACV49920.1| ubiquitin-conjugating enzyme variant [Citrus sinensis]
          Length = 146

 Score =  291 bits (745), Expect = 2e-76
 Identities = 139/146 (95%), Positives = 139/146 (95%)
 Frame = -1

Query: 856 MTLGSGGSSVVVPRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 677
           MTLGSGGSSVVVPRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 676 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 497
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLL NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMED 120

Query: 496 ILTQLKKEMAAPHNRKLVQPPEGTCF 419
           ILTQLKKEMAAPHNRKLVQPPEGT F
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146


>gb|ABA40444.1| ubiquitin-conjugating enzyme family protein-like protein [Solanum
           tuberosum] gi|78191460|gb|ABB29951.1|
           ubiquitin-conjugating enzyme family protein-like
           [Solanum tuberosum]
          Length = 146

 Score =  290 bits (743), Expect = 3e-76
 Identities = 136/146 (93%), Positives = 140/146 (95%)
 Frame = -1

Query: 856 MTLGSGGSSVVVPRNFRXXXXXERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 677
           MTLGSGGSSVVVPRNFR     ERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN+V
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNSV 60

Query: 676 HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMED 497
           HEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVEPKKF LL+NWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVEPKKFALLSNWQREYTMED 120

Query: 496 ILTQLKKEMAAPHNRKLVQPPEGTCF 419
           ILTQLKKEMA+PHNRKLVQPPEGTCF
Sbjct: 121 ILTQLKKEMASPHNRKLVQPPEGTCF 146


Top