BLASTX nr result

ID: Glycyrrhiza24_contig00002543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002543
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242135.1| uncharacterized protein LOC100789313 [Glycin...   476   e-132
gb|AAQ84167.1| isopentenyl pyrophosphate isomerase [Pueraria mon...   472   e-130
ref|XP_003624178.1| Isopentenyl-diphosphate Delta-isomerase [Med...   461   e-127
ref|XP_003534511.1| PREDICTED: isopentenyl-diphosphate Delta-iso...   459   e-127
gb|AFK39324.1| unknown [Medicago truncatula]                          457   e-126

>ref|NP_001242135.1| uncharacterized protein LOC100789313 [Glycine max]
            gi|255647098|gb|ACU24017.1| unknown [Glycine max]
          Length = 301

 Score =  476 bits (1224), Expect = e-132
 Identities = 242/301 (80%), Positives = 256/301 (85%), Gaps = 4/301 (1%)
 Frame = -2

Query: 1326 MAQSLIAVTLSQQAFKRSIXXXXXXXXXXXXXXXXXXXXXXSVFFSRK---IPLAASLSS 1156
            MA S I VTLSQ  FKR++                      S  FS++   + L AS SS
Sbjct: 1    MAHSSIVVTLSQNLFKRNLTCVKIHAHSPSSSFGSRSLSLPSFSFSQRTTPLSLTASFSS 60

Query: 1155 QTAMGETPV-AVDSGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESENLLH 979
             TAMGET   A D+GMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIE+ENLLH
Sbjct: 61   HTAMGETSAPAADAGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIEAENLLH 120

Query: 978  RAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEKALGVRNAAQRK 799
            RAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E ALGVRNAAQRK
Sbjct: 121  RAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENALGVRNAAQRK 180

Query: 798  LLDELGIVPEDLPVDEFTPLGRILYKAPSDGKWGEHELDYLLFMVRDVHVYPNPDEVADI 619
            LLDELGIV ED+PVD+FTPLGRILYKAPSDGKWGEHELDYLLF+VRDV+V PNPDEVADI
Sbjct: 181  LLDELGIVAEDVPVDQFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADI 240

Query: 618  KYVNRDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVERGTLAEVTDMKTIHKL 439
            KYVNRD+LKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+ERG L EVTDMKTIHKL
Sbjct: 241  KYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLERGALGEVTDMKTIHKL 300

Query: 438  T 436
            T
Sbjct: 301  T 301


>gb|AAQ84167.1| isopentenyl pyrophosphate isomerase [Pueraria montana var. lobata]
          Length = 301

 Score =  472 bits (1215), Expect = e-130
 Identities = 242/305 (79%), Positives = 257/305 (84%), Gaps = 8/305 (2%)
 Frame = -2

Query: 1326 MAQSLIAVTLSQQAFKRSIXXXXXXXXXXXXXXXXXXXXXXSVFFSRK-------IPLAA 1168
            MAQS I V LSQ  FKR++                       + FS++       + L A
Sbjct: 1    MAQSSIVVNLSQHLFKRNLTSLSVIAHSSYFGSRSLSS----LSFSQRRRGPHTPLTLTA 56

Query: 1167 SLSSQTAMGETPV-AVDSGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESE 991
            S SS TAMGET   A D+GMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIE+E
Sbjct: 57   SFSSHTAMGETSAPAADAGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIEAE 116

Query: 990  NLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEKALGVRNA 811
            NLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEE ALGVRNA
Sbjct: 117  NLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENALGVRNA 176

Query: 810  AQRKLLDELGIVPEDLPVDEFTPLGRILYKAPSDGKWGEHELDYLLFMVRDVHVYPNPDE 631
            AQRKLLDELGIV ED+PVD+FTPLGRILYKAPSDGKWGEHELDYLLF+VRDV+V PNPDE
Sbjct: 177  AQRKLLDELGIVAEDVPVDQFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDE 236

Query: 630  VADIKYVNRDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVERGTLAEVTDMKT 451
            VADIKYVNRD+LKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+E+GTL EVTDMKT
Sbjct: 237  VADIKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEQGTLGEVTDMKT 296

Query: 450  IHKLT 436
            IHKLT
Sbjct: 297  IHKLT 301


>ref|XP_003624178.1| Isopentenyl-diphosphate Delta-isomerase [Medicago truncatula]
            gi|355499193|gb|AES80396.1| Isopentenyl-diphosphate
            Delta-isomerase [Medicago truncatula]
          Length = 287

 Score =  461 bits (1186), Expect = e-127
 Identities = 235/298 (78%), Positives = 256/298 (85%), Gaps = 1/298 (0%)
 Frame = -2

Query: 1326 MAQSLIAVTLSQQAFKRSIXXXXXXXXXXXXXXXXXXXXXXSVFFSRKIPLAASLSSQTA 1147
            MAQS I  TLS+  FKR+I                       + F RK PL+ASLS+   
Sbjct: 1    MAQSSIVATLSRH-FKRNIIPALFAHSSFRSRSSS-------LSFRRKAPLSASLST--- 49

Query: 1146 MGETPVA-VDSGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESENLLHRAF 970
            MGETPVA VD+GMDAVQRRLMF+DECILVDENDR VGH+SKYNCHL EKIESENLLHRAF
Sbjct: 50   MGETPVAAVDAGMDAVQRRLMFDDECILVDENDRAVGHESKYNCHLWEKIESENLLHRAF 109

Query: 969  SVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEKALGVRNAAQRKLLD 790
            SVFLFNSKYELLLQQRS+TKVTFPLVWTNTCCSHPLYRESELIEE ALGVRNAAQRKLLD
Sbjct: 110  SVFLFNSKYELLLQQRSSTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 169

Query: 789  ELGIVPEDLPVDEFTPLGRILYKAPSDGKWGEHELDYLLFMVRDVHVYPNPDEVADIKYV 610
            ELGI+ +D+PVD+FTPLGRILYKAPSDGKWGEHE+DYLLF+VRDV+V PNPDEVADIKYV
Sbjct: 170  ELGILAQDVPVDQFTPLGRILYKAPSDGKWGEHEVDYLLFIVRDVNVNPNPDEVADIKYV 229

Query: 609  NRDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVERGTLAEVTDMKTIHKLT 436
            NRD+LKELLRK+DAGEEGLKLSPWFRL+VDNFLFKWWDH+E+GTL EV DMKTIHKLT
Sbjct: 230  NRDQLKELLRKSDAGEEGLKLSPWFRLIVDNFLFKWWDHLEQGTLKEVIDMKTIHKLT 287


>ref|XP_003534511.1| PREDICTED: isopentenyl-diphosphate Delta-isomerase II-like [Glycine
            max]
          Length = 295

 Score =  459 bits (1181), Expect = e-127
 Identities = 234/299 (78%), Positives = 251/299 (83%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1326 MAQSL-IAVTLSQQAFKRSIXXXXXXXXXXXXXXXXXXXXXXSVFFSRKIPLAASLSSQT 1150
            MAQS  I VTL Q  FKR++                             + L+AS SS T
Sbjct: 1    MAQSSSIVVTLRQHLFKRNLTSLTLPHSPSLPSFSFSLRTTPHT----PLSLSASFSSHT 56

Query: 1149 AMGETPV-AVDSGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESENLLHRA 973
            +M  T + + D+GMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIE+ENLLHRA
Sbjct: 57   SMAHTSLPSADAGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIEAENLLHRA 116

Query: 972  FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEKALGVRNAAQRKLL 793
            FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELI+E ALGVRNAAQRKLL
Sbjct: 117  FSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENALGVRNAAQRKLL 176

Query: 792  DELGIVPEDLPVDEFTPLGRILYKAPSDGKWGEHELDYLLFMVRDVHVYPNPDEVADIKY 613
            DELGIV ED+PVD+FTPLGRILYKAPSDGKWGEHELDYLLF+VRDV+V PNPDEVADIKY
Sbjct: 177  DELGIVAEDVPVDKFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVNPNPDEVADIKY 236

Query: 612  VNRDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVERGTLAEVTDMKTIHKLT 436
            VNRD+LKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDH+E+GTL E TDMKTIHKLT
Sbjct: 237  VNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEQGTLGEATDMKTIHKLT 295


>gb|AFK39324.1| unknown [Medicago truncatula]
          Length = 287

 Score =  457 bits (1177), Expect = e-126
 Identities = 234/298 (78%), Positives = 254/298 (85%), Gaps = 1/298 (0%)
 Frame = -2

Query: 1326 MAQSLIAVTLSQQAFKRSIXXXXXXXXXXXXXXXXXXXXXXSVFFSRKIPLAASLSSQTA 1147
            MAQS I  TLS+  FKR+I                       + F RK PL+ASLS+   
Sbjct: 1    MAQSSIVATLSRH-FKRNIIPALFAHSSFRSRSSS-------LSFRRKAPLSASLST--- 49

Query: 1146 MGETPVA-VDSGMDAVQRRLMFEDECILVDENDRVVGHDSKYNCHLMEKIESENLLHRAF 970
            MGETPVA VD+GMDAVQRRLMF+DECILVDENDR VGH+SKYNCHL EKIESENLLHRAF
Sbjct: 50   MGETPVAAVDAGMDAVQRRLMFDDECILVDENDRAVGHESKYNCHLWEKIESENLLHRAF 109

Query: 969  SVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEEKALGVRNAAQRKLLD 790
            SVFLFNSKYE LLQQRS+TKVTFPLVWTNTCCSHPLYRESELIEE ALGVRNAAQRKLLD
Sbjct: 110  SVFLFNSKYESLLQQRSSTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLD 169

Query: 789  ELGIVPEDLPVDEFTPLGRILYKAPSDGKWGEHELDYLLFMVRDVHVYPNPDEVADIKYV 610
            ELGI+ +D+PVD+FTPLGRILYKAPSDGKWGEHE+DYLLF+VRDV+V PNPDEVADIKYV
Sbjct: 170  ELGILAQDVPVDQFTPLGRILYKAPSDGKWGEHEVDYLLFIVRDVNVNPNPDEVADIKYV 229

Query: 609  NRDELKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHVERGTLAEVTDMKTIHKLT 436
            NRD+LKELLRK DAGEEGLKLSPWFRL+VDNFLFKWWDH+E+GTL EV DMKTIHKLT
Sbjct: 230  NRDQLKELLRKFDAGEEGLKLSPWFRLIVDNFLFKWWDHLEQGTLKEVIDMKTIHKLT 287


Top