BLASTX nr result

ID: Glycyrrhiza24_contig00002538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002538
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43466.1| unknown [Lotus japonicus]                              210   5e-52
ref|XP_003531773.1| PREDICTED: uncharacterized protein LOC100819...   199   8e-49
ref|XP_002527246.1| conserved hypothetical protein [Ricinus comm...   199   1e-48
ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] gi|4...   191   2e-46
ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-46

>gb|AFK43466.1| unknown [Lotus japonicus]
          Length = 219

 Score =  210 bits (535), Expect = 5e-52
 Identities = 118/180 (65%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
 Frame = +3

Query: 192 QRNHSVLCVSSGQQRNGAPVVISSSIPKQHTQSDDDNNNMLSGSTRTVTTLFGMALLCVK 371
           ++  +V C  +  QRN     I  S    HT         LSGSTRTVTTL  MALLC K
Sbjct: 50  RQTRTVSCSLTTNQRNSPVCEIRESA---HTT--------LSGSTRTVTTLLSMALLCAK 98

Query: 372 AFAKVLPPPNLCLSTVSVSTGSLFFAAIRTR-RGYLNTPMTVVAAGLKKWLDIYSGVLMV 548
           A    +PP      ++SV   SLFFA++R R  GYLNTP+TVVAAGL KWLDIYSGVLMV
Sbjct: 99  A----IPPLANGAISMSVGGSSLFFASLRDRPEGYLNTPLTVVAAGLGKWLDIYSGVLMV 154

Query: 549 RVLLSWFPNIPWERQPLSAIRDLCDPYLSLFRNIIPPVFDTLDVSPLLAFAVLGSLAKLL 728
           RVLLSWFPNIPWERQPLSAIRDLCDPYL+LFRNIIPPVFDTLDVSPLLAFAVLG+L  +L
Sbjct: 155 RVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSIL 214


>ref|XP_003531773.1| PREDICTED: uncharacterized protein LOC100819562 [Glycine max]
          Length = 204

 Score =  199 bits (507), Expect = 8e-49
 Identities = 106/149 (71%), Positives = 123/149 (82%), Gaps = 4/149 (2%)
 Frame = +3

Query: 294 DDNNNMLSGSTRTVTTLFGMALLCVKAFAKVLPPPNLCLSTVSVST-GSLFFAAIRTR-- 464
           + + ++L GSTRTVTTL G+A+L +K  A  +   N+  S+ SVST G+LF A++R R  
Sbjct: 52  ESDGDILRGSTRTVTTLMGLAVLLMKKAAIPVLNININSSSNSVSTMGALFLASLRDRPS 111

Query: 465 -RGYLNTPMTVVAAGLKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLSLF 641
             G LNTP+TVVAAGL KWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYL+LF
Sbjct: 112 ASGALNTPLTVVAAGLGKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLF 171

Query: 642 RNIIPPVFDTLDVSPLLAFAVLGSLAKLL 728
           RNIIPPVFDTLDVSPLLAFAVLG+L  +L
Sbjct: 172 RNIIPPVFDTLDVSPLLAFAVLGTLGSIL 200


>ref|XP_002527246.1| conserved hypothetical protein [Ricinus communis]
           gi|223533339|gb|EEF35090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  199 bits (506), Expect = 1e-48
 Identities = 110/169 (65%), Positives = 128/169 (75%), Gaps = 7/169 (4%)
 Frame = +3

Query: 252 VISSSIP--KQHTQSDDDNNNMLSGSTRTVTTLFGMALLCVKAFAKVLP-PPNLCL---S 413
           V SS IP    HT+S     ++L+ STRTVTT+  +A    + F   +   P L L   +
Sbjct: 57  VSSSQIPVLPSHTESQQ---SLLTDSTRTVTTILALAFSLSRLFLNQISFLPKLALQNTT 113

Query: 414 TVSVSTGSLFFAAIRTR-RGYLNTPMTVVAAGLKKWLDIYSGVLMVRVLLSWFPNIPWER 590
            ++ S G LFFAAIR R  GYLNTP+TVVAAGL KWLDIYSGVLMVRVLLSWFPNIPW+R
Sbjct: 114 NLTHSVGPLFFAAIRDRPSGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPWDR 173

Query: 591 QPLSAIRDLCDPYLSLFRNIIPPVFDTLDVSPLLAFAVLGSLAKLLSAT 737
           QPLSAIRDLCDPYL+LFRNIIPP+FDTLDVSPLLAFAVLG L  +LS++
Sbjct: 174 QPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGMLGSILSSS 222


>ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana]
           gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis
           thaliana] gi|7269653|emb|CAB79601.1| putative protein
           [Arabidopsis thaliana] gi|110741138|dbj|BAE98662.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332660017|gb|AEE85417.1| YGGT family protein
           [Arabidopsis thaliana]
          Length = 218

 Score =  191 bits (486), Expect = 2e-46
 Identities = 121/225 (53%), Positives = 147/225 (65%), Gaps = 6/225 (2%)
 Frame = +3

Query: 75  MASLAATTGLGCRASSSTRVVVVPPIQQHRRTSCCSAAKQRN-HSVLCVSSGQQRNGAPV 251
           MAS   T  L  RAS      + PPI + R +     +   + H+   + S    + +PV
Sbjct: 1   MASFT-TNSLALRASILANPRLPPPIIRPRLSLPRKLSFNLSLHNARTIVSSAVTSSSPV 59

Query: 252 VISSSIPKQHTQSDDDNNNMLSGSTRTVTTLFGMALLCVKAFAKVLPPPNLCLST---VS 422
            +SS  P Q   SD         STR++TTL  +A + +K+  + L    + LS     S
Sbjct: 60  -LSSKPPSQFPFSD---------STRSITTLVLLAGVVIKSLIQKLSVAIVNLSPQIQAS 109

Query: 423 VSTGS-LFFAAIRTR-RGYLNTPMTVVAAGLKKWLDIYSGVLMVRVLLSWFPNIPWERQP 596
             T S LFFA++R R  GYLNTP+TVVAAGL KWLDIYSGVLMVRVLLSWFPNIPW+RQP
Sbjct: 110 FRTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQP 169

Query: 597 LSAIRDLCDPYLSLFRNIIPPVFDTLDVSPLLAFAVLGSLAKLLS 731
           LSAIRDLCDPYL+LFRNIIPPVFDTLDVSPLLAFAVLG+L  +L+
Sbjct: 170 LSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILN 214


>ref|XP_002301821.1| predicted protein [Populus trichocarpa] gi|222843547|gb|EEE81094.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  191 bits (484), Expect = 4e-46
 Identities = 102/171 (59%), Positives = 122/171 (71%), Gaps = 17/171 (9%)
 Frame = +3

Query: 276 QHTQSDDDNNNMLSGSTRTVTTLFGMALLCVKAFA----------KVLPPPNLCL----- 410
           Q TQ   ++   L GSTRTV T+  +AL   + F            + P P+  +     
Sbjct: 75  QSTQIPTESQPQLIGSTRTVATILTLALSLSRIFVTSIQKFVLSHNLFPTPDQLVAIRAL 134

Query: 411 -STVSVSTGSLFFAAIRTR-RGYLNTPMTVVAAGLKKWLDIYSGVLMVRVLLSWFPNIPW 584
            S +  S G  FFAA++ R  GYLNTP+TVVAAGL KWLDIYSGVLMVRVLLSWFPNIPW
Sbjct: 135 QSNLVHSVGPFFFAALKDRPTGYLNTPLTVVAAGLAKWLDIYSGVLMVRVLLSWFPNIPW 194

Query: 585 ERQPLSAIRDLCDPYLSLFRNIIPPVFDTLDVSPLLAFAVLGSLAKLLSAT 737
           +RQPLSAIRDLCDPYL+LFRNIIPP+FDTLDVSPLLAFAVLG+L  +L+++
Sbjct: 195 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILNSS 245


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